RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 HCLS1P14317 486 aaPredicted RBP11.21□□□□□ -0.62
BDNF-216ENST00000532997 LARP1BQ659C4 914 aaKnown RBP11.21□□□□□ -0.62
BDNF-216ENST00000532997 BECN2A8MW95 431 aa11.2□□□□□ -0.62
BDNF-216ENST00000532997 TAF7Q15545 349 aaPredicted RBP11.2□□□□□ -0.62
BDNF-216ENST00000532997 CWC27Q6UX04 472 aaKnown RBP11.2□□□□□ -0.62
BDNF-216ENST00000532997 PIBF1Q8WXW3 757 aa11.2□□□□□ -0.62
BDNF-216ENST00000532997 TRIM5Q9C035 493 aa11.2□□□□□ -0.62
BDNF-216ENST00000532997 DDX58O95786 925 aaKnown RBP11.2□□□□□ -0.62
BDNF-216ENST00000532997 MYRIPQ8NFW9 859 aa11.2□□□□□ -0.62
BDNF-216ENST00000532997 TNMDQ9H2S6 317 aa11.2□□□□□ -0.62
BDNF-216ENST00000532997 TTC21AQ8NDW8 1320 aa11.2□□□□□ -0.62
BDNF-216ENST00000532997 F13A1P00488 732 aa11.2□□□□□ -0.62
BDNF-216ENST00000532997 SMAP1Q8IYB5 467 aaPredicted RBP11.2□□□□□ -0.62
BDNF-216ENST00000532997 MPNDQ8N594 471 aa11.2□□□□□ -0.62
BDNF-216ENST00000532997 SIRT1Q96EB6 747 aa11.2□□□□□ -0.62
BDNF-216ENST00000532997 CHMP3Q9Y3E7 222 aa11.2□□□□□ -0.62
BDNF-216ENST00000532997 CDC42BPGQ6DT37 1551 aa11.2□□□□□ -0.62
BDNF-216ENST00000532997 MAP4K4O95819 1239 aaPredicted RBP11.19□□□□□ -0.62
BDNF-216ENST00000532997 NLRP6P59044 892 aa11.19□□□□□ -0.62
BDNF-216ENST00000532997 CCDC83Q8IWF9 413 aa11.19□□□□□ -0.62
BDNF-216ENST00000532997 PDCL2Q8N4E4 241 aa11.19□□□□□ -0.62
BDNF-216ENST00000532997 SPC24Q8NBT2 197 aa11.19□□□□□ -0.62
BDNF-216ENST00000532997 SCAND2PQ9GZW5 306 aaPredicted RBP11.19□□□□□ -0.62
BDNF-216ENST00000532997 ARHGEF40Q8TER5 1519 aa11.19□□□□□ -0.62
BDNF-216ENST00000532997 HSP90AB2PQ58FF8 381 aa11.19□□□□□ -0.62
BDNF-216ENST00000532997 CCDC94Q9BW85 323 aaPredicted RBP11.19□□□□□ -0.62
BDNF-216ENST00000532997 CNPY2Q9Y2B0 182 aa11.19□□□□□ -0.62
BDNF-216ENST00000532997 ACEP12821 1306 aa11.19□□□□□ -0.62
BDNF-216ENST00000532997 RHPN1Q8TCX5 695 aa11.19□□□□□ -0.62
BDNF-216ENST00000532997 ALKQ9UM73 1620 aa11.19□□□□□ -0.62
BDNF-216ENST00000532997 FLT4P35916 1363 aa11.18□□□□□ -0.62
BDNF-216ENST00000532997 KDM4AO75164 1064 aa11.18□□□□□ -0.62
BDNF-216ENST00000532997 BLOC1S2Q6QNY1 142 aa11.18□□□□□ -0.62
BDNF-216ENST00000532997 BABAM1Q9NWV8 329 aa11.18□□□□□ -0.62
BDNF-216ENST00000532997 STAP2Q9UGK3 403 aa11.18□□□□□ -0.62
BDNF-216ENST00000532997 NAP1L2Q9ULW6 460 aaPredicted RBP11.18□□□□□ -0.62
BDNF-216ENST00000532997 ARHGEF10O15013 1369 aa11.18□□□□□ -0.62
BDNF-216ENST00000532997 HSPA4P34932 840 aa11.18□□□□□ -0.62
BDNF-216ENST00000532997 PPP1R42Q7Z4L9 355 aa11.18□□□□□ -0.62
BDNF-216ENST00000532997 GJB2P29033 226 aa11.17□□□□□ -0.62
BDNF-216ENST00000532997 FAM69CQ0P6D2 419 aa11.17□□□□□ -0.62
BDNF-216ENST00000532997 G2E3Q7L622 706 aa11.17□□□□□ -0.62
BDNF-216ENST00000532997 DDX19AQ9NUU7 478 aaKnown RBP11.17□□□□□ -0.62
BDNF-216ENST00000532997 PIK3C2BO00750 1634 aa11.17□□□□□ -0.62
BDNF-216ENST00000532997 DLC1Q96QB1 1528 aa11.17□□□□□ -0.62
BDNF-216ENST00000532997 RAD50Q92878 1312 aa11.17□□□□□ -0.62
BDNF-216ENST00000532997 C1orf141Q5JVX7 400 aa11.17□□□□□ -0.62
BDNF-216ENST00000532997 CCDC73Q6ZRK6 1079 aa11.17□□□□□ -0.62
BDNF-216ENST00000532997 TTC41PQ6P2S7 1318 aa11.17□□□□□ -0.62
BDNF-216ENST00000532997 CAVIN2O95810 425 aa11.17□□□□□ -0.62
BDNF-216ENST00000532997 NEXNQ0ZGT2 675 aa11.17□□□□□ -0.62
BDNF-216ENST00000532997 MTHFSDQ2M296 383 aaKnown RBP11.17□□□□□ -0.62
BDNF-216ENST00000532997 SPATA32Q96LK8 384 aa11.17□□□□□ -0.62
BDNF-216ENST00000532997 FSD1Q9BTV5 496 aa11.17□□□□□ -0.62
BDNF-216ENST00000532997 PRPF40BQ6NWY9 871 aaKnown RBP11.16□□□□□ -0.62
BDNF-216ENST00000532997 ZDHHC9Q9Y397 364 aa11.16□□□□□ -0.62
BDNF-216ENST00000532997 ATP10DQ9P241 1426 aa11.16□□□□□ -0.62
BDNF-216ENST00000532997 SYT1P21579 422 aa11.16□□□□□ -0.62
BDNF-216ENST00000532997 AK2P54819 239 aa11.16□□□□□ -0.62
BDNF-216ENST00000532997 KRT32Q14532 448 aa11.16□□□□□ -0.62
BDNF-216ENST00000532997 TPD52L1Q16890 204 aaPredicted RBP11.16□□□□□ -0.62
BDNF-216ENST00000532997 FAM200AQ8TCP9 573 aa11.16□□□□□ -0.62
BDNF-216ENST00000532997 TTC12Q9H892 705 aaPredicted RBP11.16□□□□□ -0.62
BDNF-216ENST00000532997 ECHDC1Q9NTX5 307 aa11.16□□□□□ -0.62
BDNF-216ENST00000532997 CCDC112Q8NEF3 446 aa11.16□□□□□ -0.62
BDNF-216ENST00000532997 DNAAF4Q8WXU2 420 aa11.16□□□□□ -0.62
BDNF-216ENST00000532997 SGSM2O43147 1006 aa11.16□□□□□ -0.62
BDNF-216ENST00000532997 DHX8Q14562 1220 aaKnown RBP11.16□□□□□ -0.62
BDNF-216ENST00000532997 EVI5LQ96CN4 794 aa11.16□□□□□ -0.62
BDNF-216ENST00000532997 AK9Q5TCS8 1911 aa11.15□□□□□ -0.62
BDNF-216ENST00000532997 VPS53Q5VIR6 699 aa11.15□□□□□ -0.62
BDNF-216ENST00000532997 GIMAP6Q6P9H5 292 aa11.15□□□□□ -0.62
BDNF-216ENST00000532997 PLPPR3Q6T4P5 718 aa11.15□□□□□ -0.62
BDNF-216ENST00000532997 NAT10Q9H0A0 1025 aaKnown RBP11.15□□□□□ -0.62
BDNF-216ENST00000532997 PALD1Q9ULE6 856 aa11.15□□□□□ -0.62
BDNF-216ENST00000532997 CD163L1Q9NR16 1453 aa11.15□□□□□ -0.62
BDNF-216ENST00000532997 MAP2P11137 1827 aaKnown RBP11.15□□□□□ -0.62
BDNF-216ENST00000532997 GADD45BO75293 160 aaPredicted RBP11.15□□□□□ -0.62
BDNF-216ENST00000532997 ZNF771Q7L3S4 317 aaPredicted RBP11.15□□□□□ -0.62
BDNF-216ENST00000532997 CFAP45Q9UL16 551 aa11.15□□□□□ -0.62
BDNF-216ENST00000532997 TMEM87AQ8NBN3 555 aa11.15□□□□□ -0.63
BDNF-216ENST00000532997 ZNF592Q92610 1267 aa11.15□□□□□ -0.63
BDNF-216ENST00000532997 ZNF830Q96NB3 372 aaPredicted RBP11.15□□□□□ -0.63
BDNF-216ENST00000532997 SPG7Q9UQ90 795 aa11.14□□□□□ -0.63
BDNF-216ENST00000532997 SBNO1A3KN83 1393 aa11.14□□□□□ -0.63
BDNF-216ENST00000532997 PNMA6EA0A0J9YXQ4 647 aa11.14□□□□□ -0.63
BDNF-216ENST00000532997 NEMFO60524 1076 aa11.14□□□□□ -0.63
BDNF-216ENST00000532997 SF3A1Q15459 793 aaKnown RBP11.14□□□□□ -0.63
BDNF-216ENST00000532997 AACSQ86V21 672 aa11.14□□□□□ -0.63
BDNF-216ENST00000532997 SNX14Q9Y5W7 946 aa11.14□□□□□ -0.63
BDNF-216ENST00000532997 PLEKHO1Q53GL0 409 aaPredicted RBP11.13□□□□□ -0.63
BDNF-216ENST00000532997 CLTCQ00610 1675 aaKnown RBP11.13□□□□□ -0.63
BDNF-216ENST00000532997 KINO60870 393 aaKnown RBP11.13□□□□□ -0.63
BDNF-216ENST00000532997 DNM1Q05193 864 aaKnown RBP11.13□□□□□ -0.63
BDNF-216ENST00000532997 SSH3Q8TE77 659 aa11.13□□□□□ -0.63
BDNF-216ENST00000532997 PPP4R3BQ5MIZ7 849 aa11.13□□□□□ -0.63
BDNF-216ENST00000532997 ZNF396Q96N95 335 aaPredicted RBP11.13□□□□□ -0.63
BDNF-216ENST00000532997 TM6SF1Q9BZW5 370 aa11.13□□□□□ -0.63
BDNF-216ENST00000532997 DIP2CQ9Y2E4 1556 aa11.12□□□□□ -0.63
BDNF-216ENST00000532997 YEATS2Q9ULM3 1422 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms