RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 N4BP2Q86UW6 1770 aaPredicted RBP22■■□□□ 1.11
UBXN1-213ENST00000532904 REC8O95072 547 aa22■■□□□ 1.11
UBXN1-213ENST00000532904 ZC3H6P61129 1189 aaKnown RBP22■■□□□ 1.11
UBXN1-213ENST00000532904 BRINP3Q76B58 766 aa21.99■■□□□ 1.11
UBXN1-213ENST00000532904 C1orf141Q5JVX7 400 aa21.99■■□□□ 1.11
UBXN1-213ENST00000532904 AK9Q5TCS8 1911 aa21.99■■□□□ 1.11
UBXN1-213ENST00000532904 SIPA1L3O60292 1781 aaPredicted RBP21.98■■□□□ 1.11
UBXN1-213ENST00000532904 OSBPL3Q9H4L5 887 aa21.98■■□□□ 1.11
UBXN1-213ENST00000532904 LGR6Q9HBX8 967 aa21.98■■□□□ 1.11
UBXN1-213ENST00000532904 ERC2O15083 957 aa21.97■■□□□ 1.11
UBXN1-213ENST00000532904 HMMRO75330 724 aa21.97■■□□□ 1.11
UBXN1-213ENST00000532904 CCT4P50991 539 aaKnown RBP21.97■■□□□ 1.11
UBXN1-213ENST00000532904 ANP32BQ92688 251 aaKnown RBP21.97■■□□□ 1.11
UBXN1-213ENST00000532904 RNMTO43148 476 aaKnown RBP21.97■■□□□ 1.11
UBXN1-213ENST00000532904 PLEKHG5O94827 1062 aa21.96■■□□□ 1.11
UBXN1-213ENST00000532904 TEFQ10587 303 aa21.96■■□□□ 1.11
UBXN1-213ENST00000532904 PKP1Q13835 747 aa21.96■■□□□ 1.11
UBXN1-213ENST00000532904 G2E3Q7L622 706 aa21.96■■□□□ 1.11
UBXN1-213ENST00000532904 APBB1O00213 710 aa21.95■■□□□ 1.11
UBXN1-213ENST00000532904 EIF4A1P60842 406 aaKnown RBP21.95■■□□□ 1.11
UBXN1-213ENST00000532904 ZSCAN23Q3MJ62 389 aa21.95■■□□□ 1.11
UBXN1-213ENST00000532904 ZNF335Q9H4Z2 1342 aaPredicted RBP21.95■■□□□ 1.11
UBXN1-213ENST00000532904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.95■■□□□ 1.1
UBXN1-213ENST00000532904 PXDNLA1KZ92 1463 aa21.95■■□□□ 1.1
UBXN1-213ENST00000532904 FLIIQ13045 1269 aa21.94■■□□□ 1.1
UBXN1-213ENST00000532904 CAVIN1Q6NZI2 390 aaKnown RBP21.94■■□□□ 1.1
UBXN1-213ENST00000532904 ZGPATQ8N5A5 531 aaKnown RBP21.94■■□□□ 1.1
UBXN1-213ENST00000532904 SLAIN2Q9P270 581 aa21.94■■□□□ 1.1
UBXN1-213ENST00000532904 SOS2Q07890 1332 aaPredicted RBP21.94■■□□□ 1.1
UBXN1-213ENST00000532904 ZSCAN30Q86W11 494 aa21.94■■□□□ 1.1
UBXN1-213ENST00000532904 ZDHHC9Q9Y397 364 aa21.94■■□□□ 1.1
UBXN1-213ENST00000532904 PDE1AP54750 535 aa21.93■■□□□ 1.1
UBXN1-213ENST00000532904 MPRIPQ6WCQ1 1025 aa21.92■■□□□ 1.1
UBXN1-213ENST00000532904 RAPGEF4Q8WZA2 1011 aa21.92■■□□□ 1.1
UBXN1-213ENST00000532904 SCN11AQ9UI33 1791 aa21.92■■□□□ 1.1
UBXN1-213ENST00000532904 NCLP19338 710 aaKnown RBP21.92■■□□□ 1.1
UBXN1-213ENST00000532904 BTBD11A6QL63 1104 aa21.91■■□□□ 1.1
UBXN1-213ENST00000532904 HDGFL1Q5TGJ6 251 aa21.91■■□□□ 1.1
UBXN1-213ENST00000532904 NLRP2Q9NX02 1062 aa21.91■■□□□ 1.1
UBXN1-213ENST00000532904 PKD1L3Q7Z443 1732 aa21.9■■□□□ 1.1
UBXN1-213ENST00000532904 TATP17735 454 aaPredicted RBP21.9■■□□□ 1.1
UBXN1-213ENST00000532904 CABLES1Q8TDN4 633 aa21.9■■□□□ 1.1
UBXN1-213ENST00000532904 HEG1Q9ULI3 1381 aa21.9■■□□□ 1.1
UBXN1-213ENST00000532904 HS1BP3Q53T59 392 aa21.89■■□□□ 1.1
UBXN1-213ENST00000532904 SALL3Q9BXA9 1300 aa21.89■■□□□ 1.09
UBXN1-213ENST00000532904 RRP9O43818 475 aaKnown RBP21.89■■□□□ 1.09
UBXN1-213ENST00000532904 PRPF40AO75400 957 aaKnown RBP21.89■■□□□ 1.09
UBXN1-213ENST00000532904 FKBP5Q13451 457 aaPredicted RBP21.89■■□□□ 1.09
UBXN1-213ENST00000532904 GPT2Q8TD30 523 aa21.89■■□□□ 1.09
UBXN1-213ENST00000532904 SPG7Q9UQ90 795 aa21.89■■□□□ 1.09
UBXN1-213ENST00000532904 NHSL1Q5SYE7 1610 aa21.88■■□□□ 1.09
UBXN1-213ENST00000532904 TPM2P07951 284 aa21.88■■□□□ 1.09
UBXN1-213ENST00000532904 RBSNQ9H1K0 784 aa21.88■■□□□ 1.09
UBXN1-213ENST00000532904 F6X3S4 739 aa21.87■■□□□ 1.09
UBXN1-213ENST00000532904 ABCA3Q99758 1704 aa21.87■■□□□ 1.09
UBXN1-213ENST00000532904 GNAI2P04899 355 aa21.87■■□□□ 1.09
UBXN1-213ENST00000532904 MCM2P49736 904 aa21.87■■□□□ 1.09
UBXN1-213ENST00000532904 MEGF6O75095 1541 aa21.86■■□□□ 1.09
UBXN1-213ENST00000532904 SLC4A10Q6U841 1118 aa21.86■■□□□ 1.09
UBXN1-213ENST00000532904 PDLIM2Q96JY6 352 aa21.86■■□□□ 1.09
UBXN1-213ENST00000532904 TUBGCP6Q96RT7 1819 aa21.86■■□□□ 1.09
UBXN1-213ENST00000532904 CSB-PGBD3P0DP91 1061 aa21.86■■□□□ 1.09
UBXN1-213ENST00000532904 ESYT1Q9BSJ8 1104 aa21.86■■□□□ 1.09
UBXN1-213ENST00000532904 GNAI3P08754 354 aa21.85■■□□□ 1.09
UBXN1-213ENST00000532904 PRIM1P49642 420 aaKnown RBP21.85■■□□□ 1.09
UBXN1-213ENST00000532904 HSP90AA2PQ14568 343 aaPredicted RBP21.85■■□□□ 1.09
UBXN1-213ENST00000532904 TMX3Q96JJ7 454 aa21.85■■□□□ 1.09
UBXN1-213ENST00000532904 NEK4P51957 841 aa21.84■■□□□ 1.09
UBXN1-213ENST00000532904 CHRNA2Q15822 529 aa21.84■■□□□ 1.09
UBXN1-213ENST00000532904 KCNQ3O43525 872 aa21.84■■□□□ 1.09
UBXN1-213ENST00000532904 MSNP26038 577 aaKnown RBP21.84■■□□□ 1.09
UBXN1-213ENST00000532904 CUL4AQ13619 759 aa21.84■■□□□ 1.09
UBXN1-213ENST00000532904 NECTIN2Q92692 538 aa21.84■■□□□ 1.09
UBXN1-213ENST00000532904 RBM27Q9P2N5 1060 aaKnown RBP21.84■■□□□ 1.09
UBXN1-213ENST00000532904 OFD1O75665 1012 aa21.83■■□□□ 1.09
UBXN1-213ENST00000532904 PHKG2P15735 406 aa21.83■■□□□ 1.09
UBXN1-213ENST00000532904 LRRCC1Q9C099 1032 aa21.83■■□□□ 1.09
UBXN1-213ENST00000532904 MRC1P22897 1456 aa21.83■■□□□ 1.09
UBXN1-213ENST00000532904 PARP4Q9UKK3 1724 aaKnown RBP21.83■■□□□ 1.08
UBXN1-213ENST00000532904 KDM6AO15550 1401 aaPredicted RBP21.83■■□□□ 1.08
UBXN1-213ENST00000532904 ANAPC15P60006 121 aa21.83■■□□□ 1.08
UBXN1-213ENST00000532904 LRSAM1Q6UWE0 723 aa21.83■■□□□ 1.08
UBXN1-213ENST00000532904 IFNL2Q8IZJ0 200 aa21.83■■□□□ 1.08
UBXN1-213ENST00000532904 EXOC6BQ9Y2D4 811 aa21.83■■□□□ 1.08
UBXN1-213ENST00000532904 MCCP23508 829 aa21.82■■□□□ 1.08
UBXN1-213ENST00000532904 IL17RAQ96F46 866 aa21.82■■□□□ 1.08
UBXN1-213ENST00000532904 GIGYF1O75420 1035 aaPredicted RBP21.81■■□□□ 1.08
UBXN1-213ENST00000532904 BRD1O95696 1058 aa21.81■■□□□ 1.08
UBXN1-213ENST00000532904 TMEM63CQ9P1W3 806 aa21.81■■□□□ 1.08
UBXN1-213ENST00000532904 MBD3O95983 291 aa21.81■■□□□ 1.08
UBXN1-213ENST00000532904 MX1P20591 662 aa21.81■■□□□ 1.08
UBXN1-213ENST00000532904 ATP8B2P98198 1209 aa21.81■■□□□ 1.08
UBXN1-213ENST00000532904 SLC52A2Q9HAB3 445 aa21.81■■□□□ 1.08
UBXN1-213ENST00000532904 DBF4Q9UBU7 674 aaPredicted RBP21.81■■□□□ 1.08
UBXN1-213ENST00000532904 EIF2S2P20042 333 aaKnown RBP21.8■■□□□ 1.08
UBXN1-213ENST00000532904 INTS4Q96HW7 963 aaKnown RBP21.8■■□□□ 1.08
UBXN1-213ENST00000532904 PHAXQ9H814 394 aaKnown RBP21.8■■□□□ 1.08
UBXN1-213ENST00000532904 CHPF2Q9P2E5 772 aa21.8■■□□□ 1.08
UBXN1-213ENST00000532904 STAP2Q9UGK3 403 aa21.8■■□□□ 1.08
UBXN1-213ENST00000532904 NOL7Q9UMY1 257 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms