RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 HEG1Q9ULI3 1381 aa30.71■■■□□ 2.51
LTBP3-220ENST00000532661 DPEP1P16444 411 aa30.71■■■□□ 2.51
LTBP3-220ENST00000532661 TM4SF1P30408 202 aa30.71■■■□□ 2.51
LTBP3-220ENST00000532661 MCM10Q7L590 875 aa30.71■■■□□ 2.51
LTBP3-220ENST00000532661 KIF13BQ9NQT8 1826 aa30.7■■■□□ 2.51
LTBP3-220ENST00000532661 STARD3NLO95772 234 aa30.7■■■□□ 2.51
LTBP3-220ENST00000532661 NARFQ9UHQ1 456 aa30.7■■■□□ 2.51
LTBP3-220ENST00000532661 KIAA1551Q9HCM1 1747 aa30.7■■■□□ 2.5
LTBP3-220ENST00000532661 SIPA1L3O60292 1781 aaPredicted RBP30.69■■■□□ 2.5
LTBP3-220ENST00000532661 BTBD11A6QL63 1104 aa30.69■■■□□ 2.5
LTBP3-220ENST00000532661 DCTN1Q14203 1278 aa30.69■■■□□ 2.5
LTBP3-220ENST00000532661 POLRMTO00411 1230 aaKnown RBP30.68■■■□□ 2.5
LTBP3-220ENST00000532661 N4BP2Q86UW6 1770 aaPredicted RBP30.67■■■□□ 2.5
LTBP3-220ENST00000532661 RTF1Q92541 710 aaKnown RBP30.67■■■□□ 2.5
LTBP3-220ENST00000532661 FMNL2Q96PY5 1086 aa30.67■■■□□ 2.5
LTBP3-220ENST00000532661 BCL2L12Q9HB09 334 aa30.67■■■□□ 2.5
LTBP3-220ENST00000532661 EIF5P55010 431 aaKnown RBP30.66■■■□□ 2.5
LTBP3-220ENST00000532661 BCS1LQ9Y276 419 aa30.66■■■□□ 2.5
LTBP3-220ENST00000532661 KCNA3P22001 575 aa30.65■■■□□ 2.5
LTBP3-220ENST00000532661 TEX13AQ9BXU3 409 aaPredicted RBP30.65■■■□□ 2.5
LTBP3-220ENST00000532661 NFIXQ14938 502 aa30.64■■■□□ 2.5
LTBP3-220ENST00000532661 A1BGP04217 495 aa30.62■■■□□ 2.49
LTBP3-220ENST00000532661 DDX10Q13206 875 aaKnown RBP30.62■■■□□ 2.49
LTBP3-220ENST00000532661 ATP10DQ9P241 1426 aa30.61■■■□□ 2.49
LTBP3-220ENST00000532661 PRAMEF22A3QJZ6 481 aa30.6■■■□□ 2.49
LTBP3-220ENST00000532661 HTATSF1O43719 755 aaKnown RBP30.6■■■□□ 2.49
LTBP3-220ENST00000532661 ZNF330Q9Y3S2 320 aaPredicted RBP30.6■■■□□ 2.49
LTBP3-220ENST00000532661 CHRNA5P30532 468 aa30.59■■■□□ 2.49
LTBP3-220ENST00000532661 PLEKHF1Q96S99 279 aa30.59■■■□□ 2.49
LTBP3-220ENST00000532661 USP16Q9Y5T5 823 aa30.59■■■□□ 2.49
LTBP3-220ENST00000532661 A0A087WZG4 1122 aa30.58■■■□□ 2.49
LTBP3-220ENST00000532661 TBC1D2BQ9UPU7 963 aa30.58■■■□□ 2.49
LTBP3-220ENST00000532661 ADCY9O60503 1353 aa30.57■■■□□ 2.48
LTBP3-220ENST00000532661 SERPINB2P05120 415 aa30.57■■■□□ 2.48
LTBP3-220ENST00000532661 IL6STP40189 918 aaPredicted RBP30.57■■■□□ 2.48
LTBP3-220ENST00000532661 BICDL1Q6ZP65 573 aa30.57■■■□□ 2.48
LTBP3-220ENST00000532661 GIGYF1O75420 1035 aaPredicted RBP30.56■■■□□ 2.48
LTBP3-220ENST00000532661 C1QTNF8P60827 252 aa30.56■■■□□ 2.48
LTBP3-220ENST00000532661 ARHGAP27Q6ZUM4 889 aa30.56■■■□□ 2.48
LTBP3-220ENST00000532661 PIM2Q9P1W9 311 aa30.56■■■□□ 2.48
LTBP3-220ENST00000532661 NEFMP07197 916 aa30.55■■■□□ 2.48
LTBP3-220ENST00000532661 PIP4K2AP48426 406 aaPredicted RBP30.55■■■□□ 2.48
LTBP3-220ENST00000532661 MIS18AQ9NYP9 233 aa30.55■■■□□ 2.48
LTBP3-220ENST00000532661 RALBP1Q15311 655 aa30.54■■■□□ 2.48
LTBP3-220ENST00000532661 TAF7Q15545 349 aaPredicted RBP30.54■■■□□ 2.48
LTBP3-220ENST00000532661 ZNF526Q8TF50 670 aaPredicted RBP30.54■■■□□ 2.48
LTBP3-220ENST00000532661 TBC1D9BQ66K14 1250 aa30.53■■■□□ 2.48
LTBP3-220ENST00000532661 SNRPA1P09661 255 aaKnown RBP30.52■■■□□ 2.48
LTBP3-220ENST00000532661 NFE2L2Q16236 605 aa30.51■■■□□ 2.47
LTBP3-220ENST00000532661 DALRD3Q5D0E6 543 aaKnown RBP30.51■■■□□ 2.47
LTBP3-220ENST00000532661 THUMPD2Q9BTF0 503 aaKnown RBP30.51■■■□□ 2.47
LTBP3-220ENST00000532661 BRCA1P38398 1863 aaKnown RBP30.5■■■□□ 2.47
LTBP3-220ENST00000532661 CAMTA2O94983 1202 aa30.49■■■□□ 2.47
LTBP3-220ENST00000532661 GPBP1L1Q9HC44 474 aaPredicted RBP30.49■■■□□ 2.47
LTBP3-220ENST00000532661 AFDNP55196 1824 aaKnown RBP30.49■■■□□ 2.47
LTBP3-220ENST00000532661 NPM2Q86SE8 214 aaKnown RBP30.48■■■□□ 2.47
LTBP3-220ENST00000532661 CARMIL3Q8ND23 1372 aa30.48■■■□□ 2.47
LTBP3-220ENST00000532661 NRXN2Q9P2S2 1712 aa30.47■■■□□ 2.47
LTBP3-220ENST00000532661 DZIP3Q86Y13 1208 aaKnown RBP30.47■■■□□ 2.47
LTBP3-220ENST00000532661 MAPK8IP3Q9UPT6 1336 aa30.47■■■□□ 2.47
LTBP3-220ENST00000532661 PNNQ9H307 717 aaKnown RBP30.46■■■□□ 2.47
LTBP3-220ENST00000532661 NBPF26B4DH59 902 aa30.45■■■□□ 2.47
LTBP3-220ENST00000532661 NBPF10Q6P3W6 841 aaKnown RBP30.45■■■□□ 2.47
LTBP3-220ENST00000532661 CCDC24Q8N4L8 307 aa30.45■■■□□ 2.47
LTBP3-220ENST00000532661 NBPF15Q8N660 670 aa30.45■■■□□ 2.47
LTBP3-220ENST00000532661 SCN7AQ01118 1682 aa30.44■■■□□ 2.46
LTBP3-220ENST00000532661 DLG5Q8TDM6 1919 aa30.43■■■□□ 2.46
LTBP3-220ENST00000532661 C2CD5Q86YS7 1000 aa30.43■■■□□ 2.46
LTBP3-220ENST00000532661 PNISRQ8TF01 805 aaKnown RBP30.42■■■□□ 2.46
LTBP3-220ENST00000532661 MYBBP1AQ9BQG0 1328 aaKnown RBP30.42■■■□□ 2.46
LTBP3-220ENST00000532661 PRR5LQ6MZQ0 368 aa30.41■■■□□ 2.46
LTBP3-220ENST00000532661 SENP3-EIF4A1A0A087X0R7 540 aa30.4■■■□□ 2.46
LTBP3-220ENST00000532661 C9orf131Q5VYM1 1079 aa30.4■■■□□ 2.46
LTBP3-220ENST00000532661 SETDB2Q96T68 719 aa30.4■■■□□ 2.46
LTBP3-220ENST00000532661 ARFGEF1Q9Y6D6 1849 aa30.4■■■□□ 2.46
LTBP3-220ENST00000532661 EIF4A1P60842 406 aaKnown RBP30.39■■■□□ 2.46
LTBP3-220ENST00000532661 H0YIN7 160 aa30.38■■■□□ 2.45
LTBP3-220ENST00000532661 RIPK4P57078 832 aa30.38■■■□□ 2.45
LTBP3-220ENST00000532661 BRIP1Q9BX63 1249 aa30.37■■■□□ 2.45
LTBP3-220ENST00000532661 TTLL6Q8N841 843 aa30.36■■■□□ 2.45
LTBP3-220ENST00000532661 CCDC146Q8IYE0 955 aa30.35■■■□□ 2.45
LTBP3-220ENST00000532661 KDM3BQ7LBC6 1761 aa30.34■■■□□ 2.45
LTBP3-220ENST00000532661 TMPOP42166 694 aaKnown RBP30.34■■■□□ 2.45
LTBP3-220ENST00000532661 CLEC4GQ6UXB4 293 aa30.34■■■□□ 2.45
LTBP3-220ENST00000532661 CNBD1Q8NA66 436 aa30.34■■■□□ 2.45
LTBP3-220ENST00000532661 BCORQ6W2J9 1755 aa30.33■■■□□ 2.45
LTBP3-220ENST00000532661 KIF3CO14782 793 aa30.33■■■□□ 2.45
LTBP3-220ENST00000532661 RRP7AQ9Y3A4 280 aaKnown RBP30.33■■■□□ 2.45
LTBP3-220ENST00000532661 NPHP1O15259 732 aa30.32■■■□□ 2.44
LTBP3-220ENST00000532661 PDE6BP35913 854 aa30.32■■■□□ 2.44
LTBP3-220ENST00000532661 RASSF7Q02833 373 aa30.32■■■□□ 2.44
LTBP3-220ENST00000532661 NGEFQ8N5V2 710 aa30.32■■■□□ 2.44
LTBP3-220ENST00000532661 ZNF622Q969S3 477 aaKnown RBP eCLIP30.32■■■□□ 2.44
LTBP3-220ENST00000532661 RNF181Q9P0P0 153 aa30.32■■■□□ 2.44
LTBP3-220ENST00000532661 ANKRD31Q8N7Z5 1873 aa30.31■■■□□ 2.44
LTBP3-220ENST00000532661 ZNF652Q9Y2D9 606 aa30.31■■■□□ 2.44
LTBP3-220ENST00000532661 HLFQ16534 295 aa30.3■■■□□ 2.44
LTBP3-220ENST00000532661 TSPYL4Q9UJ04 414 aa30.3■■■□□ 2.44
LTBP3-220ENST00000532661 DLEC1Q9Y238 1755 aa30.3■■■□□ 2.44
LTBP3-220ENST00000532661 ST5P78524 1137 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms