RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 ARHGEF12Q9NZN5 1544 aa9.54□□□□□ -0.88
CTNND1-230ENST00000532245 XBP1P17861 261 aa9.54□□□□□ -0.88
CTNND1-230ENST00000532245 ANO8Q9HCE9 1232 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-230ENST00000532245 ATP6V1DQ9Y5K8 247 aa9.54□□□□□ -0.88
CTNND1-230ENST00000532245 PLEKHG3A1L390 1219 aa9.54□□□□□ -0.88
CTNND1-230ENST00000532245 TPD52L1Q16890 204 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-230ENST00000532245 FAM182BQ5T319 152 aa9.54□□□□□ -0.88
CTNND1-230ENST00000532245 ANKRD18AQ8IVF6 992 aa9.54□□□□□ -0.88
CTNND1-230ENST00000532245 PREX2Q70Z35 1606 aa9.54□□□□□ -0.88
CTNND1-230ENST00000532245 SBNO1A3KN83 1393 aa9.54□□□□□ -0.88
CTNND1-230ENST00000532245 CHD1LQ86WJ1 897 aa9.54□□□□□ -0.88
CTNND1-230ENST00000532245 C22orf23Q9BZE7 217 aa9.53□□□□□ -0.88
CTNND1-230ENST00000532245 PTPRCP08575 1304 aa9.53□□□□□ -0.88
CTNND1-230ENST00000532245 MINDY4BA8MYZ0 360 aa9.53□□□□□ -0.88
CTNND1-230ENST00000532245 NYXQ9GZU5 481 aa9.53□□□□□ -0.88
CTNND1-230ENST00000532245 F8W031 263 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-230ENST00000532245 KIAA2012Q0VF49 1180 aa9.53□□□□□ -0.88
CTNND1-230ENST00000532245 C8orf58Q8NAV2 365 aa9.53□□□□□ -0.88
CTNND1-230ENST00000532245 PTMSP20962 102 aa9.52□□□□□ -0.88
CTNND1-230ENST00000532245 KRT24Q2M2I5 525 aa9.52□□□□□ -0.88
CTNND1-230ENST00000532245 SNRKQ9NRH2 765 aa9.52□□□□□ -0.88
CTNND1-230ENST00000532245 IQSEC3Q9UPP2 1182 aaPredicted RBP9.52□□□□□ -0.88
CTNND1-230ENST00000532245 PIK3C2GO75747 1445 aa9.52□□□□□ -0.89
CTNND1-230ENST00000532245 CCDC69A6NI79 296 aa9.52□□□□□ -0.89
CTNND1-230ENST00000532245 MAP3K12Q12852 859 aa9.52□□□□□ -0.89
CTNND1-230ENST00000532245 PIBF1Q8WXW3 757 aa9.52□□□□□ -0.89
CTNND1-230ENST00000532245 ADCY10Q96PN6 1610 aa9.52□□□□□ -0.89
CTNND1-230ENST00000532245 ROBO2Q9HCK4 1378 aa9.52□□□□□ -0.89
CTNND1-230ENST00000532245 CLASP1Q7Z460 1538 aa9.52□□□□□ -0.89
CTNND1-230ENST00000532245 SLC4A8Q2Y0W8 1093 aa9.52□□□□□ -0.89
CTNND1-230ENST00000532245 UBAC1Q9BSL1 405 aa9.52□□□□□ -0.89
CTNND1-230ENST00000532245 ADGBQ8N7X0 1667 aa9.52□□□□□ -0.89
CTNND1-230ENST00000532245 WDHD1O75717 1129 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-230ENST00000532245 TRIM27P14373 513 aa9.51□□□□□ -0.89
CTNND1-230ENST00000532245 STK3Q13188 491 aa9.51□□□□□ -0.89
CTNND1-230ENST00000532245 LGR6Q9HBX8 967 aa9.51□□□□□ -0.89
CTNND1-230ENST00000532245 PDE4CQ08493 712 aa9.51□□□□□ -0.89
CTNND1-230ENST00000532245 MKNK2Q9HBH9 465 aa9.51□□□□□ -0.89
CTNND1-230ENST00000532245 NSFL1CQ9UNZ2 370 aaKnown RBP9.51□□□□□ -0.89
CTNND1-230ENST00000532245 RAB11FIP3O75154 756 aa9.51□□□□□ -0.89
CTNND1-230ENST00000532245 ZFYVE9O95405 1425 aa9.51□□□□□ -0.89
CTNND1-230ENST00000532245 NKTRP30414 1462 aaKnown RBP9.51□□□□□ -0.89
CTNND1-230ENST00000532245 NEK4P51957 841 aa9.51□□□□□ -0.89
CTNND1-230ENST00000532245 RBM26Q5T8P6 1007 aaKnown RBP9.51□□□□□ -0.89
CTNND1-230ENST00000532245 MSL1Q68DK7 614 aa9.51□□□□□ -0.89
CTNND1-230ENST00000532245 C16orf71Q8IYS4 520 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-230ENST00000532245 KIAA0232Q92628 1395 aa9.51□□□□□ -0.89
CTNND1-230ENST00000532245 RIMBP2O15034 1052 aa9.51□□□□□ -0.89
CTNND1-230ENST00000532245 TRIM37O94972 964 aa9.51□□□□□ -0.89
CTNND1-230ENST00000532245 WDR78Q5VTH9 848 aa9.51□□□□□ -0.89
CTNND1-230ENST00000532245 ZNF790Q6PG37 636 aa9.51□□□□□ -0.89
CTNND1-230ENST00000532245 SLF2Q8IX21 1173 aa9.51□□□□□ -0.89
CTNND1-230ENST00000532245 CNBD1Q8NA66 436 aa9.51□□□□□ -0.89
CTNND1-230ENST00000532245 JDP2Q8WYK2 163 aa9.51□□□□□ -0.89
CTNND1-230ENST00000532245 IPO9Q96P70 1041 aaKnown RBP9.51□□□□□ -0.89
CTNND1-230ENST00000532245 CCDC24Q8N4L8 307 aa9.5□□□□□ -0.89
CTNND1-230ENST00000532245 MX1P20591 662 aa9.5□□□□□ -0.89
CTNND1-230ENST00000532245 KSR2Q6VAB6 950 aa9.5□□□□□ -0.89
CTNND1-230ENST00000532245 MYO1BO43795 1136 aa9.5□□□□□ -0.89
CTNND1-230ENST00000532245 LMBR1LQ6UX01 489 aa9.5□□□□□ -0.89
CTNND1-230ENST00000532245 BICD2Q8TD16 824 aa9.5□□□□□ -0.89
CTNND1-230ENST00000532245 IRS4O14654 1257 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-230ENST00000532245 BRINP3Q76B58 766 aa9.5□□□□□ -0.89
CTNND1-230ENST00000532245 IL16Q14005 1332 aa9.5□□□□□ -0.89
CTNND1-230ENST00000532245 C20orf194Q5TEA3 1177 aa9.49□□□□□ -0.89
CTNND1-230ENST00000532245 CERKQ8TCT0 537 aa9.49□□□□□ -0.89
CTNND1-230ENST00000532245 CCDC47Q96A33 483 aaKnown RBP9.49□□□□□ -0.89
CTNND1-230ENST00000532245 RSPH6AQ9H0K4 717 aa9.49□□□□□ -0.89
CTNND1-230ENST00000532245 CTNNA3Q9UI47 895 aa9.49□□□□□ -0.89
CTNND1-230ENST00000532245 IL13P35225 146 aa9.49□□□□□ -0.89
CTNND1-230ENST00000532245 GLRX3O76003 335 aaKnown RBP9.49□□□□□ -0.89
CTNND1-230ENST00000532245 CWF19L2Q2TBE0 894 aaKnown RBP9.49□□□□□ -0.89
CTNND1-230ENST00000532245 OGFOD1Q8N543 542 aa9.49□□□□□ -0.89
CTNND1-230ENST00000532245 SLC52A2Q9HAB3 445 aa9.49□□□□□ -0.89
CTNND1-230ENST00000532245 A1BGP04217 495 aa9.49□□□□□ -0.89
CTNND1-230ENST00000532245 TMEM132AQ24JP5 1023 aa9.49□□□□□ -0.89
CTNND1-230ENST00000532245 ZC3H12CQ9C0D7 883 aaKnown RBP9.49□□□□□ -0.89
CTNND1-230ENST00000532245 NAPBQ9H115 298 aa9.49□□□□□ -0.89
CTNND1-230ENST00000532245 DNAJC10Q8IXB1 793 aa9.48□□□□□ -0.89
CTNND1-230ENST00000532245 CYP46A1Q9Y6A2 500 aa9.48□□□□□ -0.89
CTNND1-230ENST00000532245 GOLIM4O00461 696 aa9.48□□□□□ -0.89
CTNND1-230ENST00000532245 IMMTQ16891 758 aaKnown RBP9.48□□□□□ -0.89
CTNND1-230ENST00000532245 SOGA3Q5TF21 947 aa9.48□□□□□ -0.89
CTNND1-230ENST00000532245 HELBQ8NG08 1087 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-230ENST00000532245 NOC3LQ8WTT2 800 aaKnown RBP9.48□□□□□ -0.89
CTNND1-230ENST00000532245 ZNF287Q9HBT7 754 aa9.48□□□□□ -0.89
CTNND1-230ENST00000532245 ABCC3O15438 1527 aa9.48□□□□□ -0.89
CTNND1-230ENST00000532245 POLR3AO14802 1390 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-230ENST00000532245 GRM8O00222 908 aa9.48□□□□□ -0.89
CTNND1-230ENST00000532245 CNKSR2Q8WXI2 1034 aa9.48□□□□□ -0.89
CTNND1-230ENST00000532245 CCDC87Q9NVE4 849 aa9.48□□□□□ -0.89
CTNND1-230ENST00000532245 KRT27Q7Z3Y8 459 aa9.48□□□□□ -0.89
CTNND1-230ENST00000532245 TSPYL6Q8N831 410 aa9.47□□□□□ -0.89
CTNND1-230ENST00000532245 HDAC9Q9UKV0 1011 aa9.47□□□□□ -0.89
CTNND1-230ENST00000532245 GJA3Q9Y6H8 435 aa9.47□□□□□ -0.89
CTNND1-230ENST00000532245 MYCNP04198 464 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-230ENST00000532245 TRIM22Q8IYM9 498 aa9.47□□□□□ -0.89
CTNND1-230ENST00000532245 PRDM15P57071 1507 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-230ENST00000532245 RANBP6O60518 1105 aaKnown RBP9.47□□□□□ -0.89
CTNND1-230ENST00000532245 PHAXQ9H814 394 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms