RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 UBR2Q8IWV8 1755 aa23.58■■□□□ 1.37
PKP3-208ENST00000531857 ZPR1O75312 459 aa23.58■■□□□ 1.37
PKP3-208ENST00000531857 HMOX1P09601 288 aa23.58■■□□□ 1.37
PKP3-208ENST00000531857 CYP19A1P11511 503 aaPredicted RBP23.58■■□□□ 1.37
PKP3-208ENST00000531857 RNMTO43148 476 aaKnown RBP23.57■■□□□ 1.36
PKP3-208ENST00000531857 RNF181Q9P0P0 153 aa23.57■■□□□ 1.36
PKP3-208ENST00000531857 TNRC6CQ9HCJ0 1690 aaKnown RBP23.57■■□□□ 1.36
PKP3-208ENST00000531857 RBM46Q8TBY0 533 aaKnown RBP23.55■■□□□ 1.36
PKP3-208ENST00000531857 ZEB1P37275 1124 aaPredicted RBP23.54■■□□□ 1.36
PKP3-208ENST00000531857 NFIXQ14938 502 aa23.54■■□□□ 1.36
PKP3-208ENST00000531857 MTHFSDQ2M296 383 aaKnown RBP23.54■■□□□ 1.36
PKP3-208ENST00000531857 NARFQ9UHQ1 456 aa23.54■■□□□ 1.36
PKP3-208ENST00000531857 ZBTB1Q9Y2K1 713 aa23.54■■□□□ 1.36
PKP3-208ENST00000531857 COL15A1P39059 1388 aa23.53■■□□□ 1.36
PKP3-208ENST00000531857 C16orf71Q8IYS4 520 aaPredicted RBP23.53■■□□□ 1.36
PKP3-208ENST00000531857 HTRA3P83110 453 aa23.52■■□□□ 1.36
PKP3-208ENST00000531857 BCL2L12Q9HB09 334 aa23.52■■□□□ 1.36
PKP3-208ENST00000531857 RRAGCQ9HB90 399 aa23.52■■□□□ 1.36
PKP3-208ENST00000531857 KDM2BQ8NHM5 1336 aa23.52■■□□□ 1.36
PKP3-208ENST00000531857 KIF7Q2M1P5 1343 aa23.51■■□□□ 1.35
PKP3-208ENST00000531857 RASSF7Q02833 373 aa23.5■■□□□ 1.35
PKP3-208ENST00000531857 SIPA1L3O60292 1781 aaPredicted RBP23.5■■□□□ 1.35
PKP3-208ENST00000531857 ANKRD31Q8N7Z5 1873 aa23.49■■□□□ 1.35
PKP3-208ENST00000531857 TIAM2Q8IVF5 1701 aa23.49■■□□□ 1.35
PKP3-208ENST00000531857 DIAPH1O60610 1272 aaKnown RBP23.48■■□□□ 1.35
PKP3-208ENST00000531857 SERPINB2P05120 415 aa23.48■■□□□ 1.35
PKP3-208ENST00000531857 PRELPP51888 382 aa23.48■■□□□ 1.35
PKP3-208ENST00000531857 FSTL1Q12841 308 aa23.48■■□□□ 1.35
PKP3-208ENST00000531857 VSIG10Q8N0Z9 540 aa23.48■■□□□ 1.35
PKP3-208ENST00000531857 CCER1Q8TC90 406 aaPredicted RBP23.48■■□□□ 1.35
PKP3-208ENST00000531857 PER1O15534 1290 aaPredicted RBP23.47■■□□□ 1.35
PKP3-208ENST00000531857 CANXP27824 592 aaKnown RBP23.47■■□□□ 1.35
PKP3-208ENST00000531857 CARMIL3Q8ND23 1372 aa23.47■■□□□ 1.35
PKP3-208ENST00000531857 CC2D1BQ5T0F9 858 aaKnown RBP23.46■■□□□ 1.35
PKP3-208ENST00000531857 SCN7AQ01118 1682 aa23.44■■□□□ 1.34
PKP3-208ENST00000531857 C2CD5Q86YS7 1000 aa23.44■■□□□ 1.34
PKP3-208ENST00000531857 COL3A1P02461 1466 aaPredicted RBP23.43■■□□□ 1.34
PKP3-208ENST00000531857 COL11A2P13942 1736 aaPredicted RBP23.43■■□□□ 1.34
PKP3-208ENST00000531857 EIF5P55010 431 aaKnown RBP23.43■■□□□ 1.34
PKP3-208ENST00000531857 BICDL1Q6ZP65 573 aa23.43■■□□□ 1.34
PKP3-208ENST00000531857 TTLL6Q8N841 843 aa23.43■■□□□ 1.34
PKP3-208ENST00000531857 KLRG1Q96E93 195 aa23.43■■□□□ 1.34
PKP3-208ENST00000531857 CACNA1SQ13698 1873 aa23.43■■□□□ 1.34
PKP3-208ENST00000531857 DICER1Q9UPY3 1922 aaKnown RBP23.42■■□□□ 1.34
PKP3-208ENST00000531857 LMNB1P20700 586 aa23.42■■□□□ 1.34
PKP3-208ENST00000531857 ZC3H4Q9UPT8 1303 aaKnown RBP23.41■■□□□ 1.34
PKP3-208ENST00000531857 TTC5Q8N0Z6 440 aa23.41■■□□□ 1.34
PKP3-208ENST00000531857 IL17REQ8NFR9 667 aa23.41■■□□□ 1.34
PKP3-208ENST00000531857 ZNF496Q96IT1 587 aaPredicted RBP23.41■■□□□ 1.34
PKP3-208ENST00000531857 FER1L6Q2WGJ9 1857 aa23.41■■□□□ 1.34
PKP3-208ENST00000531857 H0YIN7 160 aa23.4■■□□□ 1.34
PKP3-208ENST00000531857 STARD3NLO95772 234 aa23.4■■□□□ 1.34
PKP3-208ENST00000531857 TBC1D9BQ66K14 1250 aa23.4■■□□□ 1.34
PKP3-208ENST00000531857 GLTPD2A6NH11 291 aa23.39■■□□□ 1.33
PKP3-208ENST00000531857 NFKBIEO00221 500 aa23.39■■□□□ 1.33
PKP3-208ENST00000531857 CNGB1Q14028 1251 aaPredicted RBP23.39■■□□□ 1.33
PKP3-208ENST00000531857 JMYQ8N9B5 988 aa23.39■■□□□ 1.33
PKP3-208ENST00000531857 SMC1BQ8NDV3 1235 aa23.39■■□□□ 1.33
PKP3-208ENST00000531857 HEG1Q9ULI3 1381 aa23.39■■□□□ 1.33
PKP3-208ENST00000531857 A0A087WZG4 1122 aa23.37■■□□□ 1.33
PKP3-208ENST00000531857 U2SURPO15042 1029 aaKnown RBP23.37■■□□□ 1.33
PKP3-208ENST00000531857 TEFQ10587 303 aa23.37■■□□□ 1.33
PKP3-208ENST00000531857 ZNF790Q6PG37 636 aa23.37■■□□□ 1.33
PKP3-208ENST00000531857 CCDC24Q8N4L8 307 aa23.37■■□□□ 1.33
PKP3-208ENST00000531857 TBC1D2BQ9UPU7 963 aa23.37■■□□□ 1.33
PKP3-208ENST00000531857 GNAT3A8MTJ3 354 aa23.36■■□□□ 1.33
PKP3-208ENST00000531857 VEGFAP15692 232 aaPredicted RBP23.36■■□□□ 1.33
PKP3-208ENST00000531857 ZNF330Q9Y3S2 320 aaPredicted RBP23.36■■□□□ 1.33
PKP3-208ENST00000531857 BCORQ6W2J9 1755 aa23.36■■□□□ 1.33
PKP3-208ENST00000531857 ZNF622Q969S3 477 aaKnown RBP eCLIP23.35■■□□□ 1.33
PKP3-208ENST00000531857 SLX4Q8IY92 1834 aa23.35■■□□□ 1.33
PKP3-208ENST00000531857 PRR5LQ6MZQ0 368 aa23.34■■□□□ 1.33
PKP3-208ENST00000531857 GAS2L2Q8NHY3 880 aa23.34■■□□□ 1.33
PKP3-208ENST00000531857 ZNF219Q9P2Y4 722 aaPredicted RBP23.34■■□□□ 1.33
PKP3-208ENST00000531857 PCNTO95613 3336 aa23.33■■□□□ 1.33
PKP3-208ENST00000531857 ARFGEF2Q9Y6D5 1785 aa23.33■■□□□ 1.33
PKP3-208ENST00000531857 POTECB2RU33 542 aa23.33■■□□□ 1.33
PKP3-208ENST00000531857 A1BGP04217 495 aa23.33■■□□□ 1.33
PKP3-208ENST00000531857 COL13A1Q5TAT6 717 aaPredicted RBP23.33■■□□□ 1.33
PKP3-208ENST00000531857 BRIP1Q9BX63 1249 aa23.33■■□□□ 1.33
PKP3-208ENST00000531857 TEX13AQ9BXU3 409 aaPredicted RBP23.33■■□□□ 1.33
PKP3-208ENST00000531857 KCNQ3O43525 872 aa23.32■■□□□ 1.32
PKP3-208ENST00000531857 C21orf2O43822 256 aa23.32■■□□□ 1.32
PKP3-208ENST00000531857 IL6STP40189 918 aaPredicted RBP23.32■■□□□ 1.32
PKP3-208ENST00000531857 NPC1L1Q9UHC9 1359 aa23.31■■□□□ 1.32
PKP3-208ENST00000531857 PDE6BP35913 854 aa23.31■■□□□ 1.32
PKP3-208ENST00000531857 PHACTR3Q96KR7 559 aa23.31■■□□□ 1.32
PKP3-208ENST00000531857 FMNL2Q96PY5 1086 aa23.31■■□□□ 1.32
PKP3-208ENST00000531857 CEMIPQ8WUJ3 1361 aa23.3■■□□□ 1.32
PKP3-208ENST00000531857 CAMTA2O94983 1202 aa23.29■■□□□ 1.32
PKP3-208ENST00000531857 PDZRN3Q9UPQ7 1066 aa23.28■■□□□ 1.32
PKP3-208ENST00000531857 PIP4K2AP48426 406 aaPredicted RBP23.27■■□□□ 1.32
PKP3-208ENST00000531857 ERFEQ4G0M1 354 aa23.27■■□□□ 1.32
PKP3-208ENST00000531857 CNBD1Q8NA66 436 aa23.27■■□□□ 1.32
PKP3-208ENST00000531857 SETDB2Q96T68 719 aa23.27■■□□□ 1.32
PKP3-208ENST00000531857 BTBD11A6QL63 1104 aa23.26■■□□□ 1.31
PKP3-208ENST00000531857 PRKAR2BP31323 418 aa23.26■■□□□ 1.31
PKP3-208ENST00000531857 DPY19L2Q6NUT2 758 aa23.26■■□□□ 1.31
PKP3-208ENST00000531857 USP16Q9Y5T5 823 aa23.26■■□□□ 1.31
PKP3-208ENST00000531857 PRAMEF22A3QJZ6 481 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms