RNA–Protein interactions for RNA: ENST00000531749.1

LINC02548-201, Transcript of long intergenic non-protein coding RNA 2548, humanhuman

TSL 3 BASIC

Gene LINC02548, Length 484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02548-201ENST00000531749 SLC52A2Q9HAB3 445 aa13.05□□□□□ -0.32
LINC02548-201ENST00000531749 SOS1Q07889 1333 aaPredicted RBP13.05□□□□□ -0.32
LINC02548-201ENST00000531749 RNMTO43148 476 aaKnown RBP13.04□□□□□ -0.32
LINC02548-201ENST00000531749 AKAP4Q5JQC9 854 aa13.04□□□□□ -0.32
LINC02548-201ENST00000531749 KLRG1Q96E93 195 aa13.04□□□□□ -0.32
LINC02548-201ENST00000531749 ZBTB1Q9Y2K1 713 aa13.04□□□□□ -0.32
LINC02548-201ENST00000531749 NRXN2Q9P2S2 1712 aa13.03□□□□□ -0.32
LINC02548-201ENST00000531749 POTECB2RU33 542 aa13.03□□□□□ -0.32
LINC02548-201ENST00000531749 EIF4G2P78344 907 aaKnown RBP eCLIP13.03□□□□□ -0.32
LINC02548-201ENST00000531749 AMER1Q5JTC6 1135 aaPredicted RBP13.03□□□□□ -0.32
LINC02548-201ENST00000531749 NARFQ9UHQ1 456 aa13.03□□□□□ -0.32
LINC02548-201ENST00000531749 SERPINB2P05120 415 aa13.02□□□□□ -0.33
LINC02548-201ENST00000531749 HMOX1P09601 288 aa13.02□□□□□ -0.33
LINC02548-201ENST00000531749 FSTL1Q12841 308 aa13.02□□□□□ -0.33
LINC02548-201ENST00000531749 MTHFSDQ2M296 383 aaKnown RBP13.02□□□□□ -0.33
LINC02548-201ENST00000531749 PCGF6Q9BYE7 350 aa13.02□□□□□ -0.33
LINC02548-201ENST00000531749 ZPR1O75312 459 aa13.01□□□□□ -0.33
LINC02548-201ENST00000531749 CARMIL3Q8ND23 1372 aa13.01□□□□□ -0.33
LINC02548-201ENST00000531749 KDM2BQ8NHM5 1336 aa13□□□□□ -0.33
LINC02548-201ENST00000531749 NFKBIEO00221 500 aa13□□□□□ -0.33
LINC02548-201ENST00000531749 MRC1P22897 1456 aa12.99□□□□□ -0.33
LINC02548-201ENST00000531749 GLTPD2A6NH11 291 aa12.99□□□□□ -0.33
LINC02548-201ENST00000531749 PER1O15534 1290 aaPredicted RBP12.99□□□□□ -0.33
LINC02548-201ENST00000531749 EIF5P55010 431 aaKnown RBP12.99□□□□□ -0.33
LINC02548-201ENST00000531749 C16orf71Q8IYS4 520 aaPredicted RBP12.99□□□□□ -0.33
LINC02548-201ENST00000531749 CCDC24Q8N4L8 307 aa12.99□□□□□ -0.33
LINC02548-201ENST00000531749 ANKRD31Q8N7Z5 1873 aa12.99□□□□□ -0.33
LINC02548-201ENST00000531749 DLEC1Q9Y238 1755 aa12.99□□□□□ -0.33
LINC02548-201ENST00000531749 COL15A1P39059 1388 aa12.98□□□□□ -0.33
LINC02548-201ENST00000531749 CANXP27824 592 aaKnown RBP12.98□□□□□ -0.33
LINC02548-201ENST00000531749 IL17REQ8NFR9 667 aa12.98□□□□□ -0.33
LINC02548-201ENST00000531749 KNSTRNQ9Y448 316 aa12.98□□□□□ -0.33
LINC02548-201ENST00000531749 TNRC6CQ9HCJ0 1690 aaKnown RBP12.98□□□□□ -0.33
LINC02548-201ENST00000531749 CLSPNQ9HAW4 1339 aa12.97□□□□□ -0.33
LINC02548-201ENST00000531749 LMNB1P20700 586 aa12.97□□□□□ -0.33
LINC02548-201ENST00000531749 TBC1D9BQ66K14 1250 aa12.97□□□□□ -0.33
LINC02548-201ENST00000531749 BICDL1Q6ZP65 573 aa12.97□□□□□ -0.33
LINC02548-201ENST00000531749 C2CD5Q86YS7 1000 aa12.97□□□□□ -0.33
LINC02548-201ENST00000531749 TTLL6Q8N841 843 aa12.97□□□□□ -0.33
LINC02548-201ENST00000531749 UBR2Q8IWV8 1755 aa12.97□□□□□ -0.33
LINC02548-201ENST00000531749 VEGFAP15692 232 aaPredicted RBP12.96□□□□□ -0.33
LINC02548-201ENST00000531749 VSIG10Q8N0Z9 540 aa12.96□□□□□ -0.33
LINC02548-201ENST00000531749 SMC1BQ8NDV3 1235 aa12.96□□□□□ -0.33
LINC02548-201ENST00000531749 ZNF496Q96IT1 587 aaPredicted RBP12.96□□□□□ -0.33
LINC02548-201ENST00000531749 KCNQ3O43525 872 aa12.95□□□□□ -0.34
LINC02548-201ENST00000531749 ZNF219Q9P2Y4 722 aaPredicted RBP12.95□□□□□ -0.34
LINC02548-201ENST00000531749 TBC1D2BQ9UPU7 963 aa12.95□□□□□ -0.34
LINC02548-201ENST00000531749 FER1L6Q2WGJ9 1857 aa12.95□□□□□ -0.34
LINC02548-201ENST00000531749 KIF7Q2M1P5 1343 aa12.94□□□□□ -0.34
LINC02548-201ENST00000531749 DICER1Q9UPY3 1922 aaKnown RBP12.94□□□□□ -0.34
LINC02548-201ENST00000531749 PRR5LQ6MZQ0 368 aa12.94□□□□□ -0.34
LINC02548-201ENST00000531749 SLX4Q8IY92 1834 aa12.94□□□□□ -0.34
LINC02548-201ENST00000531749 PCNTO95613 3336 aa12.94□□□□□ -0.34
LINC02548-201ENST00000531749 ZC3H4Q9UPT8 1303 aaKnown RBP12.93□□□□□ -0.34
LINC02548-201ENST00000531749 H0YIN7 160 aa12.93□□□□□ -0.34
LINC02548-201ENST00000531749 C21orf2O43822 256 aa12.93□□□□□ -0.34
LINC02548-201ENST00000531749 DIAPH1O60610 1272 aaKnown RBP12.93□□□□□ -0.34
LINC02548-201ENST00000531749 A1BGP04217 495 aa12.93□□□□□ -0.34
LINC02548-201ENST00000531749 POTEIP0CG38 1075 aa12.93□□□□□ -0.34
LINC02548-201ENST00000531749 POTEJP0CG39 1038 aa12.93□□□□□ -0.34
LINC02548-201ENST00000531749 COL11A2P13942 1736 aaPredicted RBP12.93□□□□□ -0.34
LINC02548-201ENST00000531749 SIPA1L3O60292 1781 aaPredicted RBP12.92□□□□□ -0.34
LINC02548-201ENST00000531749 CAPN15O75808 1086 aa12.92□□□□□ -0.34
LINC02548-201ENST00000531749 CC2D1BQ5T0F9 858 aaKnown RBP12.92□□□□□ -0.34
LINC02548-201ENST00000531749 TIAM2Q8IVF5 1701 aa12.92□□□□□ -0.34
LINC02548-201ENST00000531749 ZNF622Q969S3 477 aaKnown RBP eCLIP12.92□□□□□ -0.34
LINC02548-201ENST00000531749 COL3A1P02461 1466 aaPredicted RBP12.91□□□□□ -0.34
LINC02548-201ENST00000531749 CAMTA2O94983 1202 aa12.91□□□□□ -0.34
LINC02548-201ENST00000531749 HSPA1AP0DMV8 641 aaKnown RBP12.91□□□□□ -0.34
LINC02548-201ENST00000531749 HSPA1BP0DMV9 641 aaKnown RBP12.91□□□□□ -0.34
LINC02548-201ENST00000531749 ZNF790Q6PG37 636 aa12.91□□□□□ -0.34
LINC02548-201ENST00000531749 PHACTR3Q96KR7 559 aa12.91□□□□□ -0.34
LINC02548-201ENST00000531749 BRIP1Q9BX63 1249 aa12.91□□□□□ -0.34
LINC02548-201ENST00000531749 USP16Q9Y5T5 823 aa12.91□□□□□ -0.34
LINC02548-201ENST00000531749 HEG1Q9ULI3 1381 aa12.91□□□□□ -0.34
LINC02548-201ENST00000531749 PRAMEF22A3QJZ6 481 aa12.9□□□□□ -0.34
LINC02548-201ENST00000531749 DDNO94850 711 aaPredicted RBP12.9□□□□□ -0.34
LINC02548-201ENST00000531749 STARD3NLO95772 234 aa12.9□□□□□ -0.34
LINC02548-201ENST00000531749 PIP4K2AP48426 406 aaPredicted RBP12.9□□□□□ -0.34
LINC02548-201ENST00000531749 CACNA1SQ13698 1873 aa12.89□□□□□ -0.35
LINC02548-201ENST00000531749 IL6STP40189 918 aaPredicted RBP12.89□□□□□ -0.35
LINC02548-201ENST00000531749 TNS4Q8IZW8 715 aa12.89□□□□□ -0.35
LINC02548-201ENST00000531749 C7orf43Q8WVR3 580 aa12.89□□□□□ -0.35
LINC02548-201ENST00000531749 A0A087WZG4 1122 aa12.88□□□□□ -0.35
LINC02548-201ENST00000531749 GNAT3A8MTJ3 354 aa12.88□□□□□ -0.35
LINC02548-201ENST00000531749 SRGNP10124 158 aa12.88□□□□□ -0.35
LINC02548-201ENST00000531749 CNGB1Q14028 1251 aaPredicted RBP12.88□□□□□ -0.35
LINC02548-201ENST00000531749 ERFEQ4G0M1 354 aa12.88□□□□□ -0.35
LINC02548-201ENST00000531749 TTC5Q8N0Z6 440 aa12.88□□□□□ -0.35
LINC02548-201ENST00000531749 ZNF330Q9Y3S2 320 aaPredicted RBP12.88□□□□□ -0.35
LINC02548-201ENST00000531749 SCN7AQ01118 1682 aa12.87□□□□□ -0.35
LINC02548-201ENST00000531749 PDE6BP35913 854 aa12.87□□□□□ -0.35
LINC02548-201ENST00000531749 DPY19L2Q6NUT2 758 aa12.87□□□□□ -0.35
LINC02548-201ENST00000531749 OLFM4Q6UX06 510 aa12.87□□□□□ -0.35
LINC02548-201ENST00000531749 LTBP3Q9NS15 1303 aa12.87□□□□□ -0.35
LINC02548-201ENST00000531749 CEMIPQ8WUJ3 1361 aa12.86□□□□□ -0.35
LINC02548-201ENST00000531749 U2SURPO15042 1029 aaKnown RBP12.86□□□□□ -0.35
LINC02548-201ENST00000531749 TEFQ10587 303 aa12.86□□□□□ -0.35
LINC02548-201ENST00000531749 TEX13AQ9BXU3 409 aaPredicted RBP12.86□□□□□ -0.35
LINC02548-201ENST00000531749 STYK1Q6J9G0 422 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms