RNA–Protein interactions for RNA: ENST00000531598.6

NPIPA3-202, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPA3, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-202ENST00000531598 ATP8B2P98198 1209 aa12.01□□□□□ -0.49
NPIPA3-202ENST00000531598 LARP1Q6PKG0 1096 aaKnown RBP12.01□□□□□ -0.49
NPIPA3-202ENST00000531598 SIRT2Q8IXJ6 389 aa12.01□□□□□ -0.49
NPIPA3-202ENST00000531598 TEX13AQ9BXU3 409 aaPredicted RBP12.01□□□□□ -0.49
NPIPA3-202ENST00000531598 THRAP3Q9Y2W1 955 aaKnown RBP12.01□□□□□ -0.49
NPIPA3-202ENST00000531598 RGPD5Q99666 1765 aa12□□□□□ -0.49
NPIPA3-202ENST00000531598 SCN11AQ9UI33 1791 aa12□□□□□ -0.49
NPIPA3-202ENST00000531598 F6X3S4 739 aa12□□□□□ -0.49
NPIPA3-202ENST00000531598 NEXNQ0ZGT2 675 aa12□□□□□ -0.49
NPIPA3-202ENST00000531598 NFATC2IPQ8NCF5 419 aa12□□□□□ -0.49
NPIPA3-202ENST00000531598 LINS1Q8NG48 757 aa12□□□□□ -0.49
NPIPA3-202ENST00000531598 LNPKQ9C0E8 428 aa12□□□□□ -0.49
NPIPA3-202ENST00000531598 C1orf115Q9H7X2 142 aa12□□□□□ -0.49
NPIPA3-202ENST00000531598 BECN1Q14457 450 aa11.99□□□□□ -0.49
NPIPA3-202ENST00000531598 BEND3Q5T5X7 828 aa11.99□□□□□ -0.49
NPIPA3-202ENST00000531598 CASC1Q6TDU7 716 aa11.99□□□□□ -0.49
NPIPA3-202ENST00000531598 ROBO1Q9Y6N7 1651 aa11.99□□□□□ -0.49
NPIPA3-202ENST00000531598 PI4KAP2A4QPH2 592 aa11.98□□□□□ -0.49
NPIPA3-202ENST00000531598 KCNQ3O43525 872 aa11.98□□□□□ -0.49
NPIPA3-202ENST00000531598 VSIG10Q8N0Z9 540 aa11.98□□□□□ -0.49
NPIPA3-202ENST00000531598 PI4KAP1Q8N8J0 262 aa11.98□□□□□ -0.49
NPIPA3-202ENST00000531598 NECTIN2Q92692 538 aa11.98□□□□□ -0.49
NPIPA3-202ENST00000531598 USP44Q9H0E7 712 aa11.98□□□□□ -0.49
NPIPA3-202ENST00000531598 PHAXQ9H814 394 aaKnown RBP11.98□□□□□ -0.49
NPIPA3-202ENST00000531598 AOX1Q06278 1338 aa11.97□□□□□ -0.49
NPIPA3-202ENST00000531598 MTX1Q13505 466 aa11.97□□□□□ -0.49
NPIPA3-202ENST00000531598 NPM2Q86SE8 214 aaKnown RBP11.97□□□□□ -0.49
NPIPA3-202ENST00000531598 SKAP1Q86WV1 359 aa11.97□□□□□ -0.49
NPIPA3-202ENST00000531598 ERC1Q8IUD2 1116 aa11.97□□□□□ -0.49
NPIPA3-202ENST00000531598 IL27Q8NEV9 243 aa11.97□□□□□ -0.49
NPIPA3-202ENST00000531598 SSH3Q8TE77 659 aa11.97□□□□□ -0.49
NPIPA3-202ENST00000531598 LRRCC1Q9C099 1032 aa11.97□□□□□ -0.49
NPIPA3-202ENST00000531598 OSBPL3Q9H4L5 887 aa11.97□□□□□ -0.49
NPIPA3-202ENST00000531598 STRN4Q9NRL3 753 aa11.97□□□□□ -0.49
NPIPA3-202ENST00000531598 BTG4Q9NY30 223 aa11.97□□□□□ -0.49
NPIPA3-202ENST00000531598 ADCY9O60503 1353 aa11.96□□□□□ -0.49
NPIPA3-202ENST00000531598 UTYO14607 1347 aa11.96□□□□□ -0.49
NPIPA3-202ENST00000531598 VIRMAQ69YN4 1812 aaKnown RBP11.96□□□□□ -0.49
NPIPA3-202ENST00000531598 ZNF496Q96IT1 587 aaPredicted RBP11.96□□□□□ -0.49
NPIPA3-202ENST00000531598 C9orf78Q9NZ63 289 aaPredicted RBP11.96□□□□□ -0.49
NPIPA3-202ENST00000531598 DISP2A7MBM2 1401 aa11.95□□□□□ -0.5
NPIPA3-202ENST00000531598 COL15A1P39059 1388 aa11.95□□□□□ -0.5
NPIPA3-202ENST00000531598 CDC45O75419 566 aa11.95□□□□□ -0.5
NPIPA3-202ENST00000531598 RIC3Q7Z5B4 369 aa11.95□□□□□ -0.5
NPIPA3-202ENST00000531598 TBC1D32Q96NH3 1257 aa11.95□□□□□ -0.5
NPIPA3-202ENST00000531598 TMOD3Q9NYL9 352 aa11.95□□□□□ -0.5
NPIPA3-202ENST00000531598 MAP3K2Q9Y2U5 619 aa11.95□□□□□ -0.5
NPIPA3-202ENST00000531598 LRRFIP2Q9Y608 721 aaKnown RBP11.95□□□□□ -0.5
NPIPA3-202ENST00000531598 LRP6O75581 1613 aa11.95□□□□□ -0.5
NPIPA3-202ENST00000531598 TNS2Q63HR2 1409 aa11.94□□□□□ -0.5
NPIPA3-202ENST00000531598 PLCH1Q4KWH8 1693 aa11.94□□□□□ -0.5
NPIPA3-202ENST00000531598 EXOC5O00471 708 aa11.94□□□□□ -0.5
NPIPA3-202ENST00000531598 POLA2Q14181 598 aa11.94□□□□□ -0.5
NPIPA3-202ENST00000531598 PDIA6Q15084 440 aa11.94□□□□□ -0.5
NPIPA3-202ENST00000531598 PLEKHM2Q8IWE5 1019 aa11.94□□□□□ -0.5
NPIPA3-202ENST00000531598 METTL22Q9BUU2 404 aaPredicted RBP11.94□□□□□ -0.5
NPIPA3-202ENST00000531598 GRM8O00222 908 aa11.93□□□□□ -0.5
NPIPA3-202ENST00000531598 SLC39A6Q13433 755 aa11.93□□□□□ -0.5
NPIPA3-202ENST00000531598 TTC22Q5TAA0 569 aa11.93□□□□□ -0.5
NPIPA3-202ENST00000531598 ANKRD13DQ6ZTN6 518 aa11.93□□□□□ -0.5
NPIPA3-202ENST00000531598 PLBD2Q8NHP8 589 aa11.93□□□□□ -0.5
NPIPA3-202ENST00000531598 KIF1BPQ96EK5 621 aa11.93□□□□□ -0.5
NPIPA3-202ENST00000531598 MYT1Q01538 1121 aa11.92□□□□□ -0.5
NPIPA3-202ENST00000531598 DDX54Q8TDD1 881 aaKnown RBP11.92□□□□□ -0.5
NPIPA3-202ENST00000531598 STAP2Q9UGK3 403 aa11.92□□□□□ -0.5
NPIPA3-202ENST00000531598 U3KPZ7 1027 aaPredicted RBP11.92□□□□□ -0.5
NPIPA3-202ENST00000531598 COL16A1Q07092 1604 aaPredicted RBP11.91□□□□□ -0.5
NPIPA3-202ENST00000531598 SRGAP3O43295 1099 aa11.91□□□□□ -0.5
NPIPA3-202ENST00000531598 EPB41L2O43491 1005 aaKnown RBP11.91□□□□□ -0.5
NPIPA3-202ENST00000531598 STARD3NLO95772 234 aa11.91□□□□□ -0.5
NPIPA3-202ENST00000531598 COPS6Q7L5N1 327 aa11.91□□□□□ -0.5
NPIPA3-202ENST00000531598 PPP1R42Q7Z4L9 355 aa11.91□□□□□ -0.5
NPIPA3-202ENST00000531598 XAGE3Q8WTP9 111 aa11.91□□□□□ -0.5
NPIPA3-202ENST00000531598 GPATCH3Q96I76 525 aa11.91□□□□□ -0.5
NPIPA3-202ENST00000531598 ANP32EQ9BTT0 268 aa11.91□□□□□ -0.5
NPIPA3-202ENST00000531598 C22orf23Q9BZE7 217 aa11.91□□□□□ -0.5
NPIPA3-202ENST00000531598 LAMB4A4D0S4 1761 aa11.91□□□□□ -0.5
NPIPA3-202ENST00000531598 PAPPAQ13219 1627 aa11.9□□□□□ -0.5
NPIPA3-202ENST00000531598 PHLPP1O60346 1717 aa11.9□□□□□ -0.5
NPIPA3-202ENST00000531598 RBM25P49756 843 aaKnown RBP11.9□□□□□ -0.5
NPIPA3-202ENST00000531598 BARGINQ6ZT62 677 aa11.9□□□□□ -0.5
NPIPA3-202ENST00000531598 PNMA6EA0A0J9YXQ4 647 aa11.89□□□□□ -0.51
NPIPA3-202ENST00000531598 NEURL1BA8MQ27 555 aa11.89□□□□□ -0.51
NPIPA3-202ENST00000531598 SURF6O75683 361 aaKnown RBP11.89□□□□□ -0.51
NPIPA3-202ENST00000531598 REC8O95072 547 aa11.89□□□□□ -0.51
NPIPA3-202ENST00000531598 MX1P20591 662 aa11.89□□□□□ -0.51
NPIPA3-202ENST00000531598 PDE1AP54750 535 aa11.89□□□□□ -0.51
NPIPA3-202ENST00000531598 PROSER3Q2NL68 480 aa11.89□□□□□ -0.51
NPIPA3-202ENST00000531598 LRP10Q7Z4F1 713 aa11.89□□□□□ -0.51
NPIPA3-202ENST00000531598 USP16Q9Y5T5 823 aa11.89□□□□□ -0.51
NPIPA3-202ENST00000531598 KCPQ6ZWJ8 1503 aa11.89□□□□□ -0.51
NPIPA3-202ENST00000531598 JCADQ9P266 1359 aa11.89□□□□□ -0.51
NPIPA3-202ENST00000531598 SPATA31A1Q5TZJ5 1347 aa11.88□□□□□ -0.51
NPIPA3-202ENST00000531598 TTC41PQ6P2S7 1318 aa11.88□□□□□ -0.51
NPIPA3-202ENST00000531598 UBR2Q8IWV8 1755 aa11.88□□□□□ -0.51
NPIPA3-202ENST00000531598 ERC2O15083 957 aa11.88□□□□□ -0.51
NPIPA3-202ENST00000531598 NBPF7P0C2Y1 421 aaPredicted RBP11.88□□□□□ -0.51
NPIPA3-202ENST00000531598 MYL6BP14649 208 aa11.88□□□□□ -0.51
NPIPA3-202ENST00000531598 AIMP1Q12904 312 aaKnown RBP11.88□□□□□ -0.51
NPIPA3-202ENST00000531598 GCKRQ14397 625 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms