RNA–Protein interactions for RNA: ENST00000531173.1

GSDMD-210, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-210ENST00000531173 ATP10DQ9P241 1426 aa22.3■■□□□ 1.16
GSDMD-210ENST00000531173 AFDNP55196 1824 aaKnown RBP22.29■■□□□ 1.16
GSDMD-210ENST00000531173 NRXN2Q9P2S2 1712 aa22.29■■□□□ 1.16
GSDMD-210ENST00000531173 POLRMTO00411 1230 aaKnown RBP22.29■■□□□ 1.16
GSDMD-210ENST00000531173 DPEP1P16444 411 aa22.29■■□□□ 1.16
GSDMD-210ENST00000531173 ARFGEF1Q9Y6D6 1849 aa22.29■■□□□ 1.16
GSDMD-210ENST00000531173 C1QTNF8P60827 252 aa22.28■■□□□ 1.16
GSDMD-210ENST00000531173 USPL1Q5W0Q7 1092 aa22.28■■□□□ 1.16
GSDMD-210ENST00000531173 BCL2L12Q9HB09 334 aa22.28■■□□□ 1.16
GSDMD-210ENST00000531173 NARFQ9UHQ1 456 aa22.28■■□□□ 1.16
GSDMD-210ENST00000531173 HEG1Q9ULI3 1381 aa22.27■■□□□ 1.16
GSDMD-210ENST00000531173 FCHSD2O94868 740 aa22.27■■□□□ 1.16
GSDMD-210ENST00000531173 TEFQ10587 303 aa22.27■■□□□ 1.16
GSDMD-210ENST00000531173 NUDCQ9Y266 331 aa22.27■■□□□ 1.16
GSDMD-210ENST00000531173 U2AF1L5P0DN76 240 aaPredicted RBP22.26■■□□□ 1.15
GSDMD-210ENST00000531173 EIF5P55010 431 aaKnown RBP22.26■■□□□ 1.15
GSDMD-210ENST00000531173 U2AF1Q01081 240 aaKnown RBP eCLIP22.26■■□□□ 1.15
GSDMD-210ENST00000531173 TTC5Q8N0Z6 440 aa22.26■■□□□ 1.15
GSDMD-210ENST00000531173 ZPR1O75312 459 aa22.25■■□□□ 1.15
GSDMD-210ENST00000531173 KCNQ3O43525 872 aa22.24■■□□□ 1.15
GSDMD-210ENST00000531173 NFIXQ14938 502 aa22.24■■□□□ 1.15
GSDMD-210ENST00000531173 GIGYF1O75420 1035 aaPredicted RBP22.23■■□□□ 1.15
GSDMD-210ENST00000531173 STARD3NLO95772 234 aa22.23■■□□□ 1.15
GSDMD-210ENST00000531173 SCN7AQ01118 1682 aa22.23■■□□□ 1.15
GSDMD-210ENST00000531173 BCS1LQ9Y276 419 aa22.22■■□□□ 1.15
GSDMD-210ENST00000531173 DLG5Q8TDM6 1919 aa22.21■■□□□ 1.15
GSDMD-210ENST00000531173 CANXP27824 592 aaKnown RBP22.21■■□□□ 1.15
GSDMD-210ENST00000531173 TEX13AQ9BXU3 409 aaPredicted RBP22.21■■□□□ 1.15
GSDMD-210ENST00000531173 BTBD11A6QL63 1104 aa22.2■■□□□ 1.14
GSDMD-210ENST00000531173 MCM10Q7L590 875 aa22.2■■□□□ 1.14
GSDMD-210ENST00000531173 FMNL2Q96PY5 1086 aa22.2■■□□□ 1.14
GSDMD-210ENST00000531173 DLEC1Q9Y238 1755 aa22.2■■□□□ 1.14
GSDMD-210ENST00000531173 HTATSF1O43719 755 aaKnown RBP22.18■■□□□ 1.14
GSDMD-210ENST00000531173 CHRNA5P30532 468 aa22.18■■□□□ 1.14
GSDMD-210ENST00000531173 PIM2Q9P1W9 311 aa22.18■■□□□ 1.14
GSDMD-210ENST00000531173 IL6STP40189 918 aaPredicted RBP22.17■■□□□ 1.14
GSDMD-210ENST00000531173 PLEKHF1Q96S99 279 aa22.17■■□□□ 1.14
GSDMD-210ENST00000531173 ANKRD31Q8N7Z5 1873 aa22.16■■□□□ 1.14
GSDMD-210ENST00000531173 A0A087WZG4 1122 aa22.16■■□□□ 1.14
GSDMD-210ENST00000531173 DCTN1Q14203 1278 aa22.16■■□□□ 1.14
GSDMD-210ENST00000531173 GPBP1L1Q9HC44 474 aaPredicted RBP22.16■■□□□ 1.14
GSDMD-210ENST00000531173 BCORQ6W2J9 1755 aa22.16■■□□□ 1.14
GSDMD-210ENST00000531173 SBF1O95248 1867 aa22.15■■□□□ 1.14
GSDMD-210ENST00000531173 CARMIL3Q8ND23 1372 aa22.15■■□□□ 1.14
GSDMD-210ENST00000531173 PRAMEF22A3QJZ6 481 aa22.15■■□□□ 1.14
GSDMD-210ENST00000531173 A1BGP04217 495 aa22.15■■□□□ 1.14
GSDMD-210ENST00000531173 SERPINB2P05120 415 aa22.15■■□□□ 1.14
GSDMD-210ENST00000531173 DALRD3Q5D0E6 543 aaKnown RBP22.15■■□□□ 1.14
GSDMD-210ENST00000531173 USP16Q9Y5T5 823 aa22.15■■□□□ 1.14
GSDMD-210ENST00000531173 ARHGAP27Q6ZUM4 889 aa22.14■■□□□ 1.13
GSDMD-210ENST00000531173 RTF1Q92541 710 aaKnown RBP22.14■■□□□ 1.13
GSDMD-210ENST00000531173 TBC1D9BQ66K14 1250 aa22.13■■□□□ 1.13
GSDMD-210ENST00000531173 TBC1D2BQ9UPU7 963 aa22.13■■□□□ 1.13
GSDMD-210ENST00000531173 KDM3BQ7LBC6 1761 aa22.12■■□□□ 1.13
GSDMD-210ENST00000531173 CAMTA2O94983 1202 aa22.12■■□□□ 1.13
GSDMD-210ENST00000531173 ZNF526Q8TF50 670 aaPredicted RBP22.12■■□□□ 1.13
GSDMD-210ENST00000531173 SENP3-EIF4A1A0A087X0R7 540 aa22.11■■□□□ 1.13
GSDMD-210ENST00000531173 KIF3CO14782 793 aa22.1■■□□□ 1.13
GSDMD-210ENST00000531173 SNRPA1P09661 255 aaKnown RBP22.1■■□□□ 1.13
GSDMD-210ENST00000531173 TAF7Q15545 349 aaPredicted RBP22.1■■□□□ 1.13
GSDMD-210ENST00000531173 LAMB4A4D0S4 1761 aa22.1■■□□□ 1.13
GSDMD-210ENST00000531173 COL11A2P13942 1736 aaPredicted RBP22.09■■□□□ 1.13
GSDMD-210ENST00000531173 NBPF26B4DH59 902 aa22.09■■□□□ 1.13
GSDMD-210ENST00000531173 NBPF10Q6P3W6 841 aaKnown RBP22.09■■□□□ 1.13
GSDMD-210ENST00000531173 BICDL1Q6ZP65 573 aa22.09■■□□□ 1.13
GSDMD-210ENST00000531173 NBPF15Q8N660 670 aa22.09■■□□□ 1.13
GSDMD-210ENST00000531173 PIP4K2AP48426 406 aaPredicted RBP22.08■■□□□ 1.13
GSDMD-210ENST00000531173 ZNF330Q9Y3S2 320 aaPredicted RBP22.08■■□□□ 1.13
GSDMD-210ENST00000531173 RALBP1Q15311 655 aa22.07■■□□□ 1.12
GSDMD-210ENST00000531173 NFE2L2Q16236 605 aa22.07■■□□□ 1.12
GSDMD-210ENST00000531173 C9orf131Q5VYM1 1079 aa22.07■■□□□ 1.12
GSDMD-210ENST00000531173 PRR5LQ6MZQ0 368 aa22.07■■□□□ 1.12
GSDMD-210ENST00000531173 MIS18AQ9NYP9 233 aa22.07■■□□□ 1.12
GSDMD-210ENST00000531173 DZIP3Q86Y13 1208 aaKnown RBP22.05■■□□□ 1.12
GSDMD-210ENST00000531173 C2CD5Q86YS7 1000 aa22.05■■□□□ 1.12
GSDMD-210ENST00000531173 BRIP1Q9BX63 1249 aa22.05■■□□□ 1.12
GSDMD-210ENST00000531173 THUMPD2Q9BTF0 503 aaKnown RBP22.04■■□□□ 1.12
GSDMD-210ENST00000531173 RGL2O15211 777 aa22.03■■□□□ 1.12
GSDMD-210ENST00000531173 PRELPP51888 382 aa22.03■■□□□ 1.12
GSDMD-210ENST00000531173 CLEC4GQ6UXB4 293 aa22.03■■□□□ 1.12
GSDMD-210ENST00000531173 TTLL6Q8N841 843 aa22.03■■□□□ 1.12
GSDMD-210ENST00000531173 H0YIN7 160 aa22.02■■□□□ 1.12
GSDMD-210ENST00000531173 SETDB2Q96T68 719 aa22.02■■□□□ 1.12
GSDMD-210ENST00000531173 CCDC88AQ3V6T2 1871 aa22.01■■□□□ 1.11
GSDMD-210ENST00000531173 DDX10Q13206 875 aaKnown RBP22.01■■□□□ 1.11
GSDMD-210ENST00000531173 CCDC24Q8N4L8 307 aa22.01■■□□□ 1.11
GSDMD-210ENST00000531173 FER1L6Q2WGJ9 1857 aa22■■□□□ 1.11
GSDMD-210ENST00000531173 NEFMP07197 916 aa22■■□□□ 1.11
GSDMD-210ENST00000531173 PDE6BP35913 854 aa22■■□□□ 1.11
GSDMD-210ENST00000531173 EIF4A1P60842 406 aaKnown RBP22■■□□□ 1.11
GSDMD-210ENST00000531173 RASSF7Q02833 373 aa22■■□□□ 1.11
GSDMD-210ENST00000531173 CNBD1Q8NA66 436 aa22■■□□□ 1.11
GSDMD-210ENST00000531173 PNISRQ8TF01 805 aaKnown RBP22■■□□□ 1.11
GSDMD-210ENST00000531173 NMRK2Q9NPI5 230 aa22■■□□□ 1.11
GSDMD-210ENST00000531173 RNF181Q9P0P0 153 aa22■■□□□ 1.11
GSDMD-210ENST00000531173 PDZRN3Q9UPQ7 1066 aa22■■□□□ 1.11
GSDMD-210ENST00000531173 ARFGEF2Q9Y6D5 1785 aa21.99■■□□□ 1.11
GSDMD-210ENST00000531173 SLX4Q8IY92 1834 aa21.99■■□□□ 1.11
GSDMD-210ENST00000531173 ZNF316A6NFI3 1004 aaPredicted RBP21.99■■□□□ 1.11
GSDMD-210ENST00000531173 NPM2Q86SE8 214 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms