RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 RNF181Q9P0P0 153 aa18.12■□□□□ 0.49
HIF3A-214ENST00000531043 NFIXQ14938 502 aa18.11■□□□□ 0.49
HIF3A-214ENST00000531043 MTHFSDQ2M296 383 aaKnown RBP18.11■□□□□ 0.49
HIF3A-214ENST00000531043 BCL2L12Q9HB09 334 aa18.11■□□□□ 0.49
HIF3A-214ENST00000531043 ZBTB1Q9Y2K1 713 aa18.11■□□□□ 0.49
HIF3A-214ENST00000531043 ZPR1O75312 459 aa18.1■□□□□ 0.49
HIF3A-214ENST00000531043 RASSF7Q02833 373 aa18.1■□□□□ 0.49
HIF3A-214ENST00000531043 KIF7Q2M1P5 1343 aa18.09■□□□□ 0.49
HIF3A-214ENST00000531043 PRELPP51888 382 aa18.09■□□□□ 0.49
HIF3A-214ENST00000531043 CCDC88AQ3V6T2 1871 aa18.09■□□□□ 0.49
HIF3A-214ENST00000531043 WDR90Q96KV7 1748 aa18.09■□□□□ 0.49
HIF3A-214ENST00000531043 NRXN2Q9P2S2 1712 aa18.09■□□□□ 0.49
HIF3A-214ENST00000531043 RBM46Q8TBY0 533 aaKnown RBP18.08■□□□□ 0.48
HIF3A-214ENST00000531043 RRAGCQ9HB90 399 aa18.08■□□□□ 0.48
HIF3A-214ENST00000531043 NARFQ9UHQ1 456 aa18.08■□□□□ 0.48
HIF3A-214ENST00000531043 COL15A1P39059 1388 aa18.07■□□□□ 0.48
HIF3A-214ENST00000531043 CARMIL3Q8ND23 1372 aa18.07■□□□□ 0.48
HIF3A-214ENST00000531043 UBR2Q8IWV8 1755 aa18.07■□□□□ 0.48
HIF3A-214ENST00000531043 PER1O15534 1290 aaPredicted RBP18.06■□□□□ 0.48
HIF3A-214ENST00000531043 CC2D1BQ5T0F9 858 aaKnown RBP18.06■□□□□ 0.48
HIF3A-214ENST00000531043 DLEC1Q9Y238 1755 aa18.05■□□□□ 0.48
HIF3A-214ENST00000531043 SERPINB2P05120 415 aa18.05■□□□□ 0.48
HIF3A-214ENST00000531043 CANXP27824 592 aaKnown RBP18.05■□□□□ 0.48
HIF3A-214ENST00000531043 C16orf71Q8IYS4 520 aaPredicted RBP18.05■□□□□ 0.48
HIF3A-214ENST00000531043 CCER1Q8TC90 406 aaPredicted RBP18.05■□□□□ 0.48
HIF3A-214ENST00000531043 ANKRD31Q8N7Z5 1873 aa18.03■□□□□ 0.48
HIF3A-214ENST00000531043 KDM2BQ8NHM5 1336 aa18.03■□□□□ 0.48
HIF3A-214ENST00000531043 TNRC6CQ9HCJ0 1690 aaKnown RBP18.03■□□□□ 0.48
HIF3A-214ENST00000531043 DIAPH1O60610 1272 aaKnown RBP18.03■□□□□ 0.48
HIF3A-214ENST00000531043 CNGB1Q14028 1251 aaPredicted RBP18.03■□□□□ 0.48
HIF3A-214ENST00000531043 BICDL1Q6ZP65 573 aa18.03■□□□□ 0.48
HIF3A-214ENST00000531043 COL3A1P02461 1466 aaPredicted RBP18.02■□□□□ 0.48
HIF3A-214ENST00000531043 EIF5P55010 431 aaKnown RBP18.02■□□□□ 0.48
HIF3A-214ENST00000531043 C2CD5Q86YS7 1000 aa18.02■□□□□ 0.48
HIF3A-214ENST00000531043 CCDC24Q8N4L8 307 aa18.02■□□□□ 0.48
HIF3A-214ENST00000531043 IL17REQ8NFR9 667 aa18.02■□□□□ 0.48
HIF3A-214ENST00000531043 PCNTO95613 3336 aa18.01■□□□□ 0.47
HIF3A-214ENST00000531043 FSTL1Q12841 308 aa18.01■□□□□ 0.47
HIF3A-214ENST00000531043 VSIG10Q8N0Z9 540 aa18.01■□□□□ 0.47
HIF3A-214ENST00000531043 ZNF496Q96IT1 587 aaPredicted RBP18.01■□□□□ 0.47
HIF3A-214ENST00000531043 SIPA1L3O60292 1781 aaPredicted RBP18■□□□□ 0.47
HIF3A-214ENST00000531043 NFKBIEO00221 500 aa18■□□□□ 0.47
HIF3A-214ENST00000531043 TBC1D9BQ66K14 1250 aa18■□□□□ 0.47
HIF3A-214ENST00000531043 TTLL6Q8N841 843 aa18■□□□□ 0.47
HIF3A-214ENST00000531043 KLRG1Q96E93 195 aa18■□□□□ 0.47
HIF3A-214ENST00000531043 LMNB1P20700 586 aa17.99■□□□□ 0.47
HIF3A-214ENST00000531043 COL11A2P13942 1736 aaPredicted RBP17.98■□□□□ 0.47
HIF3A-214ENST00000531043 TIAM2Q8IVF5 1701 aa17.98■□□□□ 0.47
HIF3A-214ENST00000531043 KCNQ3O43525 872 aa17.98■□□□□ 0.47
HIF3A-214ENST00000531043 TBC1D2BQ9UPU7 963 aa17.98■□□□□ 0.47
HIF3A-214ENST00000531043 HEG1Q9ULI3 1381 aa17.97■□□□□ 0.47
HIF3A-214ENST00000531043 GLTPD2A6NH11 291 aa17.97■□□□□ 0.47
HIF3A-214ENST00000531043 U2SURPO15042 1029 aaKnown RBP17.97■□□□□ 0.47
HIF3A-214ENST00000531043 STARD3NLO95772 234 aa17.97■□□□□ 0.47
HIF3A-214ENST00000531043 JMYQ8N9B5 988 aa17.97■□□□□ 0.47
HIF3A-214ENST00000531043 SCN7AQ01118 1682 aa17.96■□□□□ 0.47
HIF3A-214ENST00000531043 H0YIN7 160 aa17.96■□□□□ 0.47
HIF3A-214ENST00000531043 A1BGP04217 495 aa17.96■□□□□ 0.47
HIF3A-214ENST00000531043 ZNF790Q6PG37 636 aa17.96■□□□□ 0.47
HIF3A-214ENST00000531043 TTC5Q8N0Z6 440 aa17.96■□□□□ 0.47
HIF3A-214ENST00000531043 ZNF219Q9P2Y4 722 aaPredicted RBP17.96■□□□□ 0.47
HIF3A-214ENST00000531043 ZNF330Q9Y3S2 320 aaPredicted RBP17.96■□□□□ 0.47
HIF3A-214ENST00000531043 POTECB2RU33 542 aa17.95■□□□□ 0.46
HIF3A-214ENST00000531043 COL13A1Q5TAT6 717 aaPredicted RBP17.95■□□□□ 0.46
HIF3A-214ENST00000531043 PRR5LQ6MZQ0 368 aa17.95■□□□□ 0.46
HIF3A-214ENST00000531043 SMC1BQ8NDV3 1235 aa17.95■□□□□ 0.46
HIF3A-214ENST00000531043 ZNF622Q969S3 477 aaKnown RBP eCLIP17.95■□□□□ 0.46
HIF3A-214ENST00000531043 ZC3H4Q9UPT8 1303 aaKnown RBP17.95■□□□□ 0.46
HIF3A-214ENST00000531043 CACNA1SQ13698 1873 aa17.95■□□□□ 0.46
HIF3A-214ENST00000531043 FER1L6Q2WGJ9 1857 aa17.95■□□□□ 0.46
HIF3A-214ENST00000531043 DICER1Q9UPY3 1922 aaKnown RBP17.94■□□□□ 0.46
HIF3A-214ENST00000531043 SLX4Q8IY92 1834 aa17.94■□□□□ 0.46
HIF3A-214ENST00000531043 GNAT3A8MTJ3 354 aa17.94■□□□□ 0.46
HIF3A-214ENST00000531043 TEFQ10587 303 aa17.94■□□□□ 0.46
HIF3A-214ENST00000531043 PHACTR3Q96KR7 559 aa17.94■□□□□ 0.46
HIF3A-214ENST00000531043 A0A087WZG4 1122 aa17.93■□□□□ 0.46
HIF3A-214ENST00000531043 C21orf2O43822 256 aa17.93■□□□□ 0.46
HIF3A-214ENST00000531043 CAMTA2O94983 1202 aa17.93■□□□□ 0.46
HIF3A-214ENST00000531043 VEGFAP15692 232 aaPredicted RBP17.93■□□□□ 0.46
HIF3A-214ENST00000531043 PIP4K2AP48426 406 aaPredicted RBP17.93■□□□□ 0.46
HIF3A-214ENST00000531043 PRAMEF22A3QJZ6 481 aa17.92■□□□□ 0.46
HIF3A-214ENST00000531043 GAS2L2Q8NHY3 880 aa17.92■□□□□ 0.46
HIF3A-214ENST00000531043 BRIP1Q9BX63 1249 aa17.92■□□□□ 0.46
HIF3A-214ENST00000531043 CEMIPQ8WUJ3 1361 aa17.91■□□□□ 0.46
HIF3A-214ENST00000531043 NPC1L1Q9UHC9 1359 aa17.91■□□□□ 0.46
HIF3A-214ENST00000531043 BCORQ6W2J9 1755 aa17.9■□□□□ 0.46
HIF3A-214ENST00000531043 IL6STP40189 918 aaPredicted RBP17.9■□□□□ 0.46
HIF3A-214ENST00000531043 FMNL2Q96PY5 1086 aa17.9■□□□□ 0.46
HIF3A-214ENST00000531043 USP16Q9Y5T5 823 aa17.9■□□□□ 0.46
HIF3A-214ENST00000531043 PRKAR2BP31323 418 aa17.89■□□□□ 0.45
HIF3A-214ENST00000531043 TEX13AQ9BXU3 409 aaPredicted RBP17.89■□□□□ 0.45
HIF3A-214ENST00000531043 RSPH6AQ9H0K4 717 aa17.89■□□□□ 0.45
HIF3A-214ENST00000531043 PDE6BP35913 854 aa17.88■□□□□ 0.45
HIF3A-214ENST00000531043 ERFEQ4G0M1 354 aa17.88■□□□□ 0.45
HIF3A-214ENST00000531043 SETDB2Q96T68 719 aa17.88■□□□□ 0.45
HIF3A-214ENST00000531043 BTBD11A6QL63 1104 aa17.87■□□□□ 0.45
HIF3A-214ENST00000531043 DZIP3Q86Y13 1208 aaKnown RBP17.87■□□□□ 0.45
HIF3A-214ENST00000531043 CNBD1Q8NA66 436 aa17.87■□□□□ 0.45
HIF3A-214ENST00000531043 POTEIP0CG38 1075 aa17.86■□□□□ 0.45
HIF3A-214ENST00000531043 POTEJP0CG39 1038 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms