RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 KCNA3P22001 575 aa21.17■□□□□ 0.98
CPSF1-205ENST00000531042 PPP2R1AP30153 589 aa21.17■□□□□ 0.98
CPSF1-205ENST00000531042 PRKAR2BP31323 418 aa21.17■□□□□ 0.98
CPSF1-205ENST00000531042 PHACTR3Q96KR7 559 aa21.17■□□□□ 0.98
CPSF1-205ENST00000531042 NARFQ9UHQ1 456 aa21.17■□□□□ 0.98
CPSF1-205ENST00000531042 NUDCQ9Y266 331 aa21.17■□□□□ 0.98
CPSF1-205ENST00000531042 COL15A1P39059 1388 aa21.17■□□□□ 0.98
CPSF1-205ENST00000531042 POLRMTO00411 1230 aaKnown RBP21.16■□□□□ 0.98
CPSF1-205ENST00000531042 ZNF790Q6PG37 636 aa21.16■□□□□ 0.98
CPSF1-205ENST00000531042 GPBP1L1Q9HC44 474 aaPredicted RBP21.16■□□□□ 0.98
CPSF1-205ENST00000531042 CEMIPQ8WUJ3 1361 aa21.15■□□□□ 0.98
CPSF1-205ENST00000531042 ZNF496Q96IT1 587 aaPredicted RBP21.15■□□□□ 0.98
CPSF1-205ENST00000531042 FCHSD2O94868 740 aa21.14■□□□□ 0.97
CPSF1-205ENST00000531042 STARD3NLO95772 234 aa21.14■□□□□ 0.97
CPSF1-205ENST00000531042 ARFGEF1Q9Y6D6 1849 aa21.13■□□□□ 0.97
CPSF1-205ENST00000531042 HEG1Q9ULI3 1381 aa21.13■□□□□ 0.97
CPSF1-205ENST00000531042 CANXP27824 592 aaKnown RBP21.13■□□□□ 0.97
CPSF1-205ENST00000531042 ZNF526Q8TF50 670 aaPredicted RBP21.13■□□□□ 0.97
CPSF1-205ENST00000531042 PIM2Q9P1W9 311 aa21.13■□□□□ 0.97
CPSF1-205ENST00000531042 U2AF1L5P0DN76 240 aaPredicted RBP21.12■□□□□ 0.97
CPSF1-205ENST00000531042 U2AF1Q01081 240 aaKnown RBP eCLIP21.12■□□□□ 0.97
CPSF1-205ENST00000531042 NFIXQ14938 502 aa21.12■□□□□ 0.97
CPSF1-205ENST00000531042 ARHGAP27Q6ZUM4 889 aa21.12■□□□□ 0.97
CPSF1-205ENST00000531042 TEX13AQ9BXU3 409 aaPredicted RBP21.12■□□□□ 0.97
CPSF1-205ENST00000531042 BCL2L12Q9HB09 334 aa21.12■□□□□ 0.97
CPSF1-205ENST00000531042 AFDNP55196 1824 aaKnown RBP21.12■□□□□ 0.97
CPSF1-205ENST00000531042 EIF5P55010 431 aaKnown RBP21.11■□□□□ 0.97
CPSF1-205ENST00000531042 NRXN2Q9P2S2 1712 aa21.1■□□□□ 0.97
CPSF1-205ENST00000531042 CHRNA5P30532 468 aa21.1■□□□□ 0.97
CPSF1-205ENST00000531042 FMNL2Q96PY5 1086 aa21.1■□□□□ 0.97
CPSF1-205ENST00000531042 BTBD11A6QL63 1104 aa21.09■□□□□ 0.97
CPSF1-205ENST00000531042 DALRD3Q5D0E6 543 aaKnown RBP21.09■□□□□ 0.97
CPSF1-205ENST00000531042 A0A087WZG4 1122 aa21.08■□□□□ 0.97
CPSF1-205ENST00000531042 KCNQ3O43525 872 aa21.08■□□□□ 0.97
CPSF1-205ENST00000531042 SERPINB2P05120 415 aa21.07■□□□□ 0.96
CPSF1-205ENST00000531042 IL6STP40189 918 aaPredicted RBP21.06■□□□□ 0.96
CPSF1-205ENST00000531042 RTF1Q92541 710 aaKnown RBP21.06■□□□□ 0.96
CPSF1-205ENST00000531042 MCM10Q7L590 875 aa21.05■□□□□ 0.96
CPSF1-205ENST00000531042 SCN7AQ01118 1682 aa21.05■□□□□ 0.96
CPSF1-205ENST00000531042 A1BGP04217 495 aa21.04■□□□□ 0.96
CPSF1-205ENST00000531042 TBC1D2BQ9UPU7 963 aa21.04■□□□□ 0.96
CPSF1-205ENST00000531042 DLEC1Q9Y238 1755 aa21.03■□□□□ 0.96
CPSF1-205ENST00000531042 KIF3CO14782 793 aa21.03■□□□□ 0.96
CPSF1-205ENST00000531042 HTATSF1O43719 755 aaKnown RBP21.03■□□□□ 0.96
CPSF1-205ENST00000531042 BICDL1Q6ZP65 573 aa21.03■□□□□ 0.96
CPSF1-205ENST00000531042 ZNF330Q9Y3S2 320 aaPredicted RBP21.03■□□□□ 0.96
CPSF1-205ENST00000531042 CEP350Q5VT06 3117 aa21.03■□□□□ 0.96
CPSF1-205ENST00000531042 DCTN1Q14203 1278 aa21.02■□□□□ 0.96
CPSF1-205ENST00000531042 C9orf131Q5VYM1 1079 aa21.02■□□□□ 0.96
CPSF1-205ENST00000531042 TBC1D9BQ66K14 1250 aa21.02■□□□□ 0.96
CPSF1-205ENST00000531042 USP16Q9Y5T5 823 aa21.02■□□□□ 0.96
CPSF1-205ENST00000531042 CARMIL3Q8ND23 1372 aa21■□□□□ 0.95
CPSF1-205ENST00000531042 PRAMEF22A3QJZ6 481 aa21■□□□□ 0.95
CPSF1-205ENST00000531042 NPM2Q86SE8 214 aaKnown RBP21■□□□□ 0.95
CPSF1-205ENST00000531042 SBF1O95248 1867 aa20.99■□□□□ 0.95
CPSF1-205ENST00000531042 SNRPA1P09661 255 aaKnown RBP20.99■□□□□ 0.95
CPSF1-205ENST00000531042 C2CD5Q86YS7 1000 aa20.99■□□□□ 0.95
CPSF1-205ENST00000531042 ANKRD31Q8N7Z5 1873 aa20.98■□□□□ 0.95
CPSF1-205ENST00000531042 DLG5Q8TDM6 1919 aa20.98■□□□□ 0.95
CPSF1-205ENST00000531042 BCORQ6W2J9 1755 aa20.98■□□□□ 0.95
CPSF1-205ENST00000531042 CAMTA2O94983 1202 aa20.98■□□□□ 0.95
CPSF1-205ENST00000531042 H0YIN7 160 aa20.97■□□□□ 0.95
CPSF1-205ENST00000531042 PIP4K2AP48426 406 aaPredicted RBP20.97■□□□□ 0.95
CPSF1-205ENST00000531042 TAF7Q15545 349 aaPredicted RBP20.97■□□□□ 0.95
CPSF1-205ENST00000531042 DZIP3Q86Y13 1208 aaKnown RBP20.97■□□□□ 0.95
CPSF1-205ENST00000531042 TTLL6Q8N841 843 aa20.97■□□□□ 0.95
CPSF1-205ENST00000531042 RNF181Q9P0P0 153 aa20.97■□□□□ 0.95
CPSF1-205ENST00000531042 NEFMP07197 916 aa20.96■□□□□ 0.95
CPSF1-205ENST00000531042 HSPA6P17066 643 aa20.96■□□□□ 0.95
CPSF1-205ENST00000531042 PRR5LQ6MZQ0 368 aa20.96■□□□□ 0.95
CPSF1-205ENST00000531042 PLEKHF1Q96S99 279 aa20.96■□□□□ 0.95
CPSF1-205ENST00000531042 SETDB2Q96T68 719 aa20.95■□□□□ 0.94
CPSF1-205ENST00000531042 BRIP1Q9BX63 1249 aa20.95■□□□□ 0.94
CPSF1-205ENST00000531042 NMRK2Q9NPI5 230 aa20.95■□□□□ 0.94
CPSF1-205ENST00000531042 PDZRN3Q9UPQ7 1066 aa20.95■□□□□ 0.94
CPSF1-205ENST00000531042 PDE6BP35913 854 aa20.94■□□□□ 0.94
CPSF1-205ENST00000531042 MIS18AQ9NYP9 233 aa20.94■□□□□ 0.94
CPSF1-205ENST00000531042 TOMM70O94826 608 aa20.93■□□□□ 0.94
CPSF1-205ENST00000531042 RASSF7Q02833 373 aa20.93■□□□□ 0.94
CPSF1-205ENST00000531042 CCDC24Q8N4L8 307 aa20.93■□□□□ 0.94
CPSF1-205ENST00000531042 COL11A2P13942 1736 aaPredicted RBP20.92■□□□□ 0.94
CPSF1-205ENST00000531042 NBPF26B4DH59 902 aa20.92■□□□□ 0.94
CPSF1-205ENST00000531042 NBPF10Q6P3W6 841 aaKnown RBP20.92■□□□□ 0.94
CPSF1-205ENST00000531042 CLEC4GQ6UXB4 293 aa20.92■□□□□ 0.94
CPSF1-205ENST00000531042 NBPF15Q8N660 670 aa20.92■□□□□ 0.94
CPSF1-205ENST00000531042 KDM3BQ7LBC6 1761 aa20.92■□□□□ 0.94
CPSF1-205ENST00000531042 NFE2L2Q16236 605 aa20.91■□□□□ 0.94
CPSF1-205ENST00000531042 CNBD1Q8NA66 436 aa20.91■□□□□ 0.94
CPSF1-205ENST00000531042 KDM2BQ8NHM5 1336 aa20.91■□□□□ 0.94
CPSF1-205ENST00000531042 PNISRQ8TF01 805 aaKnown RBP20.91■□□□□ 0.94
CPSF1-205ENST00000531042 ZNF622Q969S3 477 aaKnown RBP eCLIP20.91■□□□□ 0.948e-8■■□□□ 13.1
CPSF1-205ENST00000531042 LAMB4A4D0S4 1761 aa20.9■□□□□ 0.94
CPSF1-205ENST00000531042 LMNB1P20700 586 aa20.9■□□□□ 0.94
CPSF1-205ENST00000531042 PRELPP51888 382 aa20.9■□□□□ 0.94
CPSF1-205ENST00000531042 PNNQ9H307 717 aaKnown RBP20.9■□□□□ 0.94
CPSF1-205ENST00000531042 NPHP1O15259 732 aa20.89■□□□□ 0.93
CPSF1-205ENST00000531042 ST5P78524 1137 aa20.89■□□□□ 0.93
CPSF1-205ENST00000531042 ZNF652Q9Y2D9 606 aa20.89■□□□□ 0.93
CPSF1-205ENST00000531042 CCDC88AQ3V6T2 1871 aa20.89■□□□□ 0.93
CPSF1-205ENST00000531042 MAPK8IP3Q9UPT6 1336 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms