RNA–Protein interactions for RNA: ENST00000530311.6

TRIM49D1-202, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 2,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-202ENST00000530311 SOS1Q07889 1333 aaPredicted RBP11.23□□□□□ -0.61
TRIM49D1-202ENST00000530311 SLIT1O75093 1534 aa11.22□□□□□ -0.61
TRIM49D1-202ENST00000530311 SRGAP3O43295 1099 aa11.22□□□□□ -0.61
TRIM49D1-202ENST00000530311 MCM2P49736 904 aa11.22□□□□□ -0.61
TRIM49D1-202ENST00000530311 NBPF6Q5VWK0 638 aa11.22□□□□□ -0.61
TRIM49D1-202ENST00000530311 PI4K2BQ8TCG2 481 aa11.22□□□□□ -0.61
TRIM49D1-202ENST00000530311 RHPN1Q8TCX5 695 aa11.22□□□□□ -0.61
TRIM49D1-202ENST00000530311 NBPF4Q96M43 638 aa11.22□□□□□ -0.61
TRIM49D1-202ENST00000530311 SRCIN1Q9C0H9 1055 aa11.22□□□□□ -0.61
TRIM49D1-202ENST00000530311 ARHGAP23Q9P227 1491 aa11.22□□□□□ -0.61
TRIM49D1-202ENST00000530311 PI4KAP2A4QPH2 592 aa11.21□□□□□ -0.61
TRIM49D1-202ENST00000530311 GADD45BO75293 160 aaPredicted RBP11.21□□□□□ -0.61
TRIM49D1-202ENST00000530311 ANAPC15P60006 121 aa11.21□□□□□ -0.61
TRIM49D1-202ENST00000530311 POLA2Q14181 598 aa11.21□□□□□ -0.61
TRIM49D1-202ENST00000530311 LRSAM1Q6UWE0 723 aa11.21□□□□□ -0.61
TRIM49D1-202ENST00000530311 ZSCAN30Q86W11 494 aa11.21□□□□□ -0.61
TRIM49D1-202ENST00000530311 PI4KAP1Q8N8J0 262 aa11.21□□□□□ -0.61
TRIM49D1-202ENST00000530311 RNF214Q8ND24 703 aa11.21□□□□□ -0.61
TRIM49D1-202ENST00000530311 TUBGCP6Q96RT7 1819 aa11.21□□□□□ -0.61
TRIM49D1-202ENST00000530311 FAM208AQ9UK61 1670 aaKnown RBP11.21□□□□□ -0.62
TRIM49D1-202ENST00000530311 HSPA4P34932 840 aa11.21□□□□□ -0.62
TRIM49D1-202ENST00000530311 EIF4A1P60842 406 aaKnown RBP11.21□□□□□ -0.62
TRIM49D1-202ENST00000530311 TPRNQ4KMQ1 711 aa11.21□□□□□ -0.62
TRIM49D1-202ENST00000530311 LRRC37A3O60309 1634 aa11.2□□□□□ -0.62
TRIM49D1-202ENST00000530311 BEND3Q5T5X7 828 aa11.2□□□□□ -0.62
TRIM49D1-202ENST00000530311 RASEFQ8IZ41 740 aa11.2□□□□□ -0.62
TRIM49D1-202ENST00000530311 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.2□□□□□ -0.62
TRIM49D1-202ENST00000530311 SETD1BQ9UPS6 1966 aaKnown RBP11.2□□□□□ -0.62
TRIM49D1-202ENST00000530311 CPA1P15085 419 aa11.2□□□□□ -0.62
TRIM49D1-202ENST00000530311 LRRC59Q96AG4 307 aaKnown RBP11.2□□□□□ -0.62
TRIM49D1-202ENST00000530311 INTS4Q96HW7 963 aaKnown RBP11.2□□□□□ -0.62
TRIM49D1-202ENST00000530311 SPG7Q9UQ90 795 aa11.2□□□□□ -0.62
TRIM49D1-202ENST00000530311 MARF1Q9Y4F3 1742 aaKnown RBP11.2□□□□□ -0.62
TRIM49D1-202ENST00000530311 SGSM2O43147 1006 aa11.19□□□□□ -0.62
TRIM49D1-202ENST00000530311 RAB11FIP3O75154 756 aa11.19□□□□□ -0.62
TRIM49D1-202ENST00000530311 CWC27Q6UX04 472 aaKnown RBP11.19□□□□□ -0.62
TRIM49D1-202ENST00000530311 MPRIPQ6WCQ1 1025 aa11.19□□□□□ -0.62
TRIM49D1-202ENST00000530311 THEMISQ8N1K5 641 aaPredicted RBP11.19□□□□□ -0.62
TRIM49D1-202ENST00000530311 DNAAF4Q8WXU2 420 aa11.19□□□□□ -0.62
TRIM49D1-202ENST00000530311 PDLIM2Q96JY6 352 aa11.19□□□□□ -0.62
TRIM49D1-202ENST00000530311 BABAM1Q9NWV8 329 aa11.19□□□□□ -0.62
TRIM49D1-202ENST00000530311 SNX14Q9Y5W7 946 aa11.19□□□□□ -0.62
TRIM49D1-202ENST00000530311 USP48Q86UV5 1035 aa11.18□□□□□ -0.62
TRIM49D1-202ENST00000530311 IL17RAQ96F46 866 aa11.18□□□□□ -0.62
TRIM49D1-202ENST00000530311 LSG1Q9H089 658 aaKnown RBP11.18□□□□□ -0.62
TRIM49D1-202ENST00000530311 AOX1Q06278 1338 aa11.18□□□□□ -0.62
TRIM49D1-202ENST00000530311 IP6K1Q92551 441 aa11.18□□□□□ -0.62
TRIM49D1-202ENST00000530311 KIF1BPQ96EK5 621 aa11.18□□□□□ -0.62
TRIM49D1-202ENST00000530311 CEMIPQ8WUJ3 1361 aa11.18□□□□□ -0.62
TRIM49D1-202ENST00000530311 PRAMEF22A3QJZ6 481 aa11.17□□□□□ -0.62
TRIM49D1-202ENST00000530311 MSNP26038 577 aaKnown RBP11.17□□□□□ -0.62
TRIM49D1-202ENST00000530311 PROSER3Q2NL68 480 aa11.17□□□□□ -0.62
TRIM49D1-202ENST00000530311 PHF8Q9UPP1 1060 aa11.17□□□□□ -0.62
TRIM49D1-202ENST00000530311 PA2G4Q9UQ80 394 aaKnown RBP11.17□□□□□ -0.62
TRIM49D1-202ENST00000530311 BTBD11A6QL63 1104 aa11.17□□□□□ -0.62
TRIM49D1-202ENST00000530311 MBD3O95983 291 aa11.17□□□□□ -0.62
TRIM49D1-202ENST00000530311 AK2P54819 239 aa11.17□□□□□ -0.62
TRIM49D1-202ENST00000530311 KIAA1211Q6ZU35 1233 aa11.17□□□□□ -0.62
TRIM49D1-202ENST00000530311 RUFY3Q7L099 469 aa11.17□□□□□ -0.62
TRIM49D1-202ENST00000530311 DDX54Q8TDD1 881 aaKnown RBP11.17□□□□□ -0.62
TRIM49D1-202ENST00000530311 RAD50Q92878 1312 aa11.16□□□□□ -0.62
TRIM49D1-202ENST00000530311 PXDNLA1KZ92 1463 aa11.16□□□□□ -0.62
TRIM49D1-202ENST00000530311 PTH1RQ03431 593 aa11.16□□□□□ -0.62
TRIM49D1-202ENST00000530311 OS9Q13438 667 aaPredicted RBP11.16□□□□□ -0.62
TRIM49D1-202ENST00000530311 TTC14Q96N46 770 aa11.16□□□□□ -0.62
TRIM49D1-202ENST00000530311 NOL7Q9UMY1 257 aaKnown RBP11.16□□□□□ -0.62
TRIM49D1-202ENST00000530311 ADCY9O60503 1353 aa11.16□□□□□ -0.62
TRIM49D1-202ENST00000530311 RPAP1Q9BWH6 1393 aaPredicted RBP11.16□□□□□ -0.62
TRIM49D1-202ENST00000530311 OFD1O75665 1012 aa11.16□□□□□ -0.62
TRIM49D1-202ENST00000530311 LARGE1O95461 756 aa11.16□□□□□ -0.62
TRIM49D1-202ENST00000530311 XPCQ01831 940 aaPredicted RBP11.16□□□□□ -0.62
TRIM49D1-202ENST00000530311 ZNF530Q6P9A1 599 aaPredicted RBP11.16□□□□□ -0.62
TRIM49D1-202ENST00000530311 CNTROBQ8N137 903 aa11.16□□□□□ -0.62
TRIM49D1-202ENST00000530311 CNPY2Q9Y2B0 182 aa11.16□□□□□ -0.62
TRIM49D1-202ENST00000530311 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.16□□□□□ -0.62
TRIM49D1-202ENST00000530311 CACNA1FO60840 1977 aa11.15□□□□□ -0.62
TRIM49D1-202ENST00000530311 ANKARQ7Z5J8 1434 aa11.15□□□□□ -0.62
TRIM49D1-202ENST00000530311 TEFQ10587 303 aa11.15□□□□□ -0.62
TRIM49D1-202ENST00000530311 CWF19L2Q2TBE0 894 aaKnown RBP11.15□□□□□ -0.62
TRIM49D1-202ENST00000530311 MPNDQ8N594 471 aa11.15□□□□□ -0.62
TRIM49D1-202ENST00000530311 MAP3K2Q9Y2U5 619 aa11.15□□□□□ -0.62
TRIM49D1-202ENST00000530311 WDR33Q9C0J8 1336 aaKnown RBP11.15□□□□□ -0.63
TRIM49D1-202ENST00000530311 CASTP20810 708 aaKnown RBP11.14□□□□□ -0.63
TRIM49D1-202ENST00000530311 ADCK5Q3MIX3 580 aa11.14□□□□□ -0.63
TRIM49D1-202ENST00000530311 ESCO1Q5FWF5 840 aa11.14□□□□□ -0.63
TRIM49D1-202ENST00000530311 UBE2Q2Q8WVN8 375 aa11.14□□□□□ -0.63
TRIM49D1-202ENST00000530311 TSPY26PQ9H489 355 aa11.14□□□□□ -0.63
TRIM49D1-202ENST00000530311 TCHHQ07283 1943 aa11.14□□□□□ -0.63
TRIM49D1-202ENST00000530311 PSME1Q06323 249 aa11.14□□□□□ -0.63
TRIM49D1-202ENST00000530311 COL9A3Q14050 684 aaPredicted RBP11.14□□□□□ -0.63
TRIM49D1-202ENST00000530311 HS1BP3Q53T59 392 aa11.14□□□□□ -0.63
TRIM49D1-202ENST00000530311 SYT1P21579 422 aa11.13□□□□□ -0.63
TRIM49D1-202ENST00000530311 HSP90AA2PQ14568 343 aaPredicted RBP11.13□□□□□ -0.63
TRIM49D1-202ENST00000530311 PRPF40BQ6NWY9 871 aaKnown RBP11.13□□□□□ -0.63
TRIM49D1-202ENST00000530311 C9orf78Q9NZ63 289 aaPredicted RBP11.13□□□□□ -0.63
TRIM49D1-202ENST00000530311 LIMCH1Q9UPQ0 1083 aa11.13□□□□□ -0.63
TRIM49D1-202ENST00000530311 ZSCAN22P10073 491 aaPredicted RBP11.13□□□□□ -0.63
TRIM49D1-202ENST00000530311 AKAP4Q5JQC9 854 aa11.13□□□□□ -0.63
TRIM49D1-202ENST00000530311 CCDC83Q8IWF9 413 aa11.13□□□□□ -0.63
TRIM49D1-202ENST00000530311 DIAPH3Q9NSV4 1193 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms