RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 PARP3Q9Y6F1 533 aa18.51■□□□□ 0.55
CTSB-217ENST00000530296 CEMIPQ8WUJ3 1361 aa18.51■□□□□ 0.55
CTSB-217ENST00000530296 C10orf71Q711Q0 1435 aa18.5■□□□□ 0.55
CTSB-217ENST00000530296 CCER2I3L3R5 266 aa18.5■□□□□ 0.55
CTSB-217ENST00000530296 ARHGEF1Q92888 912 aaKnown RBP18.5■□□□□ 0.55
CTSB-217ENST00000530296 BCS1LQ9Y276 419 aa18.5■□□□□ 0.55
CTSB-217ENST00000530296 TMPOP42166 694 aaKnown RBP18.49■□□□□ 0.55
CTSB-217ENST00000530296 RIPK4P57078 832 aa18.49■□□□□ 0.55
CTSB-217ENST00000530296 CCDC146Q8IYE0 955 aa18.49■□□□□ 0.55
CTSB-217ENST00000530296 WWC3Q9ULE0 1092 aa18.49■□□□□ 0.55
CTSB-217ENST00000530296 GYS1P13807 737 aa18.48■□□□□ 0.55
CTSB-217ENST00000530296 COL5A3P25940 1745 aaPredicted RBP18.48■□□□□ 0.55
CTSB-217ENST00000530296 VIRMAQ69YN4 1812 aaKnown RBP18.47■□□□□ 0.55
CTSB-217ENST00000530296 C4AP0C0L4 1744 aa18.47■□□□□ 0.55
CTSB-217ENST00000530296 A0A0G2JLW4 131 aa18.47■□□□□ 0.55
CTSB-217ENST00000530296 ARHGAP27Q6ZUM4 889 aa18.47■□□□□ 0.55
CTSB-217ENST00000530296 MCM10Q7L590 875 aa18.47■□□□□ 0.55
CTSB-217ENST00000530296 TTC5Q8N0Z6 440 aa18.47■□□□□ 0.55
CTSB-217ENST00000530296 N4BP2Q86UW6 1770 aaPredicted RBP18.47■□□□□ 0.55
CTSB-217ENST00000530296 KIAA1551Q9HCM1 1747 aa18.46■□□□□ 0.55
CTSB-217ENST00000530296 SLC4A9Q96Q91 983 aa18.45■□□□□ 0.54
CTSB-217ENST00000530296 PIM2Q9P1W9 311 aa18.45■□□□□ 0.54
CTSB-217ENST00000530296 BRCA1P38398 1863 aaKnown RBP18.44■□□□□ 0.54
CTSB-217ENST00000530296 BTBD11A6QL63 1104 aa18.44■□□□□ 0.54
CTSB-217ENST00000530296 TAF7Q15545 349 aaPredicted RBP18.44■□□□□ 0.54
CTSB-217ENST00000530296 DLG5Q8TDM6 1919 aa18.44■□□□□ 0.54
CTSB-217ENST00000530296 ARFGEF1Q9Y6D6 1849 aa18.44■□□□□ 0.54
CTSB-217ENST00000530296 DPEP1P16444 411 aa18.43■□□□□ 0.54
CTSB-217ENST00000530296 CALD1Q05682 793 aaKnown RBP18.43■□□□□ 0.54
CTSB-217ENST00000530296 NEUROD2Q15784 382 aa18.43■□□□□ 0.54
CTSB-217ENST00000530296 C16orf71Q8IYS4 520 aaPredicted RBP18.43■□□□□ 0.54
CTSB-217ENST00000530296 RBM46Q8TBY0 533 aaKnown RBP18.43■□□□□ 0.54
CTSB-217ENST00000530296 APAF1O14727 1248 aa18.42■□□□□ 0.54
CTSB-217ENST00000530296 PTCD1O75127 700 aaKnown RBP18.42■□□□□ 0.54
CTSB-217ENST00000530296 CRKLP46109 303 aaKnown RBP18.42■□□□□ 0.54
CTSB-217ENST00000530296 DCTN1Q14203 1278 aa18.42■□□□□ 0.54
CTSB-217ENST00000530296 NCBP3Q53F19 620 aaKnown RBP18.42■□□□□ 0.54
CTSB-217ENST00000530296 ZNF790Q6PG37 636 aa18.42■□□□□ 0.54
CTSB-217ENST00000530296 FAM9BQ8IZU0 186 aa18.42■□□□□ 0.54
CTSB-217ENST00000530296 VSIG10Q8N0Z9 540 aa18.42■□□□□ 0.54
CTSB-217ENST00000530296 NGEFQ8N5V2 710 aa18.42■□□□□ 0.54
CTSB-217ENST00000530296 RRP7AQ9Y3A4 280 aaKnown RBP18.42■□□□□ 0.54
CTSB-217ENST00000530296 KDM2BQ8NHM5 1336 aa18.42■□□□□ 0.54
CTSB-217ENST00000530296 MYH14Q7Z406 1995 aaKnown RBP18.41■□□□□ 0.54
CTSB-217ENST00000530296 SIPA1L3O60292 1781 aaPredicted RBP18.41■□□□□ 0.54
CTSB-217ENST00000530296 DALRD3Q5D0E6 543 aaKnown RBP18.41■□□□□ 0.54
CTSB-217ENST00000530296 BABAM1Q9NWV8 329 aa18.41■□□□□ 0.54
CTSB-217ENST00000530296 USP42Q9H9J4 1324 aaKnown RBP18.41■□□□□ 0.54
CTSB-217ENST00000530296 FSTL1Q12841 308 aa18.4■□□□□ 0.54
CTSB-217ENST00000530296 SLC39A6Q13433 755 aa18.4■□□□□ 0.54
CTSB-217ENST00000530296 FMNL2Q96PY5 1086 aa18.4■□□□□ 0.54
CTSB-217ENST00000530296 TEX13AQ9BXU3 409 aaPredicted RBP18.4■□□□□ 0.54
CTSB-217ENST00000530296 KCNA3P22001 575 aa18.39■□□□□ 0.53
CTSB-217ENST00000530296 C9orf131Q5VYM1 1079 aa18.39■□□□□ 0.53
CTSB-217ENST00000530296 ZPR1O75312 459 aa18.38■□□□□ 0.53
CTSB-217ENST00000530296 DNAJC5GQ8N7S2 189 aa18.38■□□□□ 0.53
CTSB-217ENST00000530296 TRIM35Q9UPQ4 493 aa18.38■□□□□ 0.53
CTSB-217ENST00000530296 ZC3H4Q9UPT8 1303 aaKnown RBP18.38■□□□□ 0.53
CTSB-217ENST00000530296 CCDC27Q2M243 656 aa18.37■□□□□ 0.53
CTSB-217ENST00000530296 MIER1Q8N108 512 aa18.37■□□□□ 0.53
CTSB-217ENST00000530296 NMRK2Q9NPI5 230 aa18.37■□□□□ 0.53
CTSB-217ENST00000530296 KCPQ6ZWJ8 1503 aa18.36■□□□□ 0.53
CTSB-217ENST00000530296 UBR2Q8IWV8 1755 aa18.36■□□□□ 0.53
CTSB-217ENST00000530296 THUMPD2Q9BTF0 503 aaKnown RBP18.36■□□□□ 0.53
CTSB-217ENST00000530296 HEG1Q9ULI3 1381 aa18.35■□□□□ 0.53
CTSB-217ENST00000530296 STARD3NLO95772 234 aa18.35■□□□□ 0.53
CTSB-217ENST00000530296 FKBP8Q14318 412 aa18.35■□□□□ 0.53
CTSB-217ENST00000530296 ZNF496Q96IT1 587 aaPredicted RBP18.35■□□□□ 0.53
CTSB-217ENST00000530296 TSPYL4Q9UJ04 414 aa18.35■□□□□ 0.53
CTSB-217ENST00000530296 TM4SF1P30408 202 aa18.34■□□□□ 0.53
CTSB-217ENST00000530296 RNF181Q9P0P0 153 aa18.34■□□□□ 0.53
CTSB-217ENST00000530296 TJP1Q07157 1748 aa18.33■□□□□ 0.52
CTSB-217ENST00000530296 WDR90Q96KV7 1748 aa18.33■□□□□ 0.52
CTSB-217ENST00000530296 POLRMTO00411 1230 aaKnown RBP18.33■□□□□ 0.52
CTSB-217ENST00000530296 SNRPA1P09661 255 aaKnown RBP18.33■□□□□ 0.52
CTSB-217ENST00000530296 INTS5Q6P9B9 1019 aaKnown RBP18.33■□□□□ 0.52
CTSB-217ENST00000530296 SRP68Q9UHB9 627 aaKnown RBP18.33■□□□□ 0.52
CTSB-217ENST00000530296 TNRC6CQ9HCJ0 1690 aaKnown RBP18.33■□□□□ 0.52
CTSB-217ENST00000530296 GNAI1P63096 354 aa18.32■□□□□ 0.52
CTSB-217ENST00000530296 DDR1Q08345 913 aa18.32■□□□□ 0.52
CTSB-217ENST00000530296 DNAJC10Q8IXB1 793 aa18.32■□□□□ 0.52
CTSB-217ENST00000530296 CFAP44Q96MT7 982 aa18.32■□□□□ 0.52
CTSB-217ENST00000530296 CHL1O00533 1208 aa18.31■□□□□ 0.52
CTSB-217ENST00000530296 KLRG1Q96E93 195 aa18.31■□□□□ 0.52
CTSB-217ENST00000530296 IFT57Q9NWB7 429 aa18.31■□□□□ 0.52
CTSB-217ENST00000530296 MIS18AQ9NYP9 233 aa18.31■□□□□ 0.52
CTSB-217ENST00000530296 KDM3BQ7LBC6 1761 aa18.3■□□□□ 0.52
CTSB-217ENST00000530296 SOS1Q07889 1333 aaPredicted RBP18.3■□□□□ 0.52
CTSB-217ENST00000530296 KCNQ3O43525 872 aa18.3■□□□□ 0.52
CTSB-217ENST00000530296 CYP19A1P11511 503 aaPredicted RBP18.3■□□□□ 0.52
CTSB-217ENST00000530296 WWC1Q8IX03 1113 aa18.3■□□□□ 0.52
CTSB-217ENST00000530296 SMC1BQ8NDV3 1235 aa18.3■□□□□ 0.52
CTSB-217ENST00000530296 NARFQ9UHQ1 456 aa18.3■□□□□ 0.52
CTSB-217ENST00000530296 LAS1LQ9Y4W2 734 aaKnown RBP18.3■□□□□ 0.52
CTSB-217ENST00000530296 SBF1O95248 1867 aa18.3■□□□□ 0.52
CTSB-217ENST00000530296 IL16Q14005 1332 aa18.29■□□□□ 0.52
CTSB-217ENST00000530296 EIF4A1P60842 406 aaKnown RBP18.29■□□□□ 0.52
CTSB-217ENST00000530296 USPL1Q5W0Q7 1092 aa18.29■□□□□ 0.52
CTSB-217ENST00000530296 JMYQ8N9B5 988 aa18.29■□□□□ 0.52
CTSB-217ENST00000530296 PDZRN3Q9UPQ7 1066 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms