RNA–Protein interactions for RNA: ENST00000529938.1

AP002884.3-204, humanhuman

TSL 1 (best)

Gene AP002884.3, Length 1,166 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002884.3-204ENST00000529938 FKBP8Q14318 412 aa20.17■□□□□ 0.82
AP002884.3-204ENST00000529938 ZNF831Q5JPB2 1677 aa20.16■□□□□ 0.82
AP002884.3-204ENST00000529938 RASSF7Q02833 373 aa20.16■□□□□ 0.82
AP002884.3-204ENST00000529938 SRP68Q9UHB9 627 aaKnown RBP20.16■□□□□ 0.82
AP002884.3-204ENST00000529938 U2SURPO15042 1029 aaKnown RBP20.15■□□□□ 0.82
AP002884.3-204ENST00000529938 LMNB1P20700 586 aa20.15■□□□□ 0.82
AP002884.3-204ENST00000529938 CABP4P57796 275 aa20.15■□□□□ 0.82
AP002884.3-204ENST00000529938 KDM6AO15550 1401 aaPredicted RBP20.15■□□□□ 0.82
AP002884.3-204ENST00000529938 MYH14Q7Z406 1995 aaKnown RBP20.15■□□□□ 0.82
AP002884.3-204ENST00000529938 COL5A3P25940 1745 aaPredicted RBP20.13■□□□□ 0.81
AP002884.3-204ENST00000529938 USP42Q9H9J4 1324 aaKnown RBP20.13■□□□□ 0.81
AP002884.3-204ENST00000529938 POLRMTO00411 1230 aaKnown RBP20.12■□□□□ 0.81
AP002884.3-204ENST00000529938 TM4SF1P30408 202 aa20.12■□□□□ 0.81
AP002884.3-204ENST00000529938 NFATC2IPQ8NCF5 419 aa20.12■□□□□ 0.81
AP002884.3-204ENST00000529938 POTECB2RU33 542 aa20.11■□□□□ 0.81
AP002884.3-204ENST00000529938 PPP2R1AP30153 589 aa20.11■□□□□ 0.81
AP002884.3-204ENST00000529938 CRKLP46109 303 aaKnown RBP20.11■□□□□ 0.81
AP002884.3-204ENST00000529938 MTHFSDQ2M296 383 aaKnown RBP20.11■□□□□ 0.81
AP002884.3-204ENST00000529938 AKAP4Q5JQC9 854 aa20.11■□□□□ 0.81
AP002884.3-204ENST00000529938 LGR6Q9HBX8 967 aa20.11■□□□□ 0.81
AP002884.3-204ENST00000529938 COL3A1P02461 1466 aaPredicted RBP20.11■□□□□ 0.81
AP002884.3-204ENST00000529938 PRDM10Q9NQV6 1147 aa20.1■□□□□ 0.81
AP002884.3-204ENST00000529938 CREBZFQ9NS37 354 aa20.1■□□□□ 0.81
AP002884.3-204ENST00000529938 CFAP53Q96M91 514 aa20.09■□□□□ 0.81
AP002884.3-204ENST00000529938 MKRN1Q9UHC7 482 aaKnown RBP20.09■□□□□ 0.81
AP002884.3-204ENST00000529938 FOXN1O15353 648 aa20.08■□□□□ 0.81
AP002884.3-204ENST00000529938 PTCD1O75127 700 aaKnown RBP20.08■□□□□ 0.81
AP002884.3-204ENST00000529938 DPY19L2Q6NUT2 758 aa20.07■□□□□ 0.8
AP002884.3-204ENST00000529938 RNMTO43148 476 aaKnown RBP20.06■□□□□ 0.8
AP002884.3-204ENST00000529938 TTLL6Q8N841 843 aa20.06■□□□□ 0.8
AP002884.3-204ENST00000529938 INTS5Q6P9B9 1019 aaKnown RBP20.05■□□□□ 0.8
AP002884.3-204ENST00000529938 NFKBIEO00221 500 aa20.04■□□□□ 0.8
AP002884.3-204ENST00000529938 ZPR1O75312 459 aa20.04■□□□□ 0.8
AP002884.3-204ENST00000529938 SLC52A2Q9HAB3 445 aa20.04■□□□□ 0.8
AP002884.3-204ENST00000529938 CCDC88AQ3V6T2 1871 aa20.03■□□□□ 0.8
AP002884.3-204ENST00000529938 USPL1Q5W0Q7 1092 aa20.03■□□□□ 0.8
AP002884.3-204ENST00000529938 CHADLQ6NUI6 762 aa20.03■□□□□ 0.8
AP002884.3-204ENST00000529938 NUDCQ9Y266 331 aa20.03■□□□□ 0.8
AP002884.3-204ENST00000529938 U2AF1L5P0DN76 240 aaPredicted RBP20.02■□□□□ 0.8
AP002884.3-204ENST00000529938 PRKAR2BP31323 418 aa20.02■□□□□ 0.8
AP002884.3-204ENST00000529938 CTCFP49711 727 aaPredicted RBP20.02■□□□□ 0.8
AP002884.3-204ENST00000529938 U2AF1Q01081 240 aaKnown RBP eCLIP20.02■□□□□ 0.8
AP002884.3-204ENST00000529938 SLC39A6Q13433 755 aa20.02■□□□□ 0.8
AP002884.3-204ENST00000529938 NFIXQ14938 502 aa20.02■□□□□ 0.8
AP002884.3-204ENST00000529938 PHACTR3Q96KR7 559 aa20.02■□□□□ 0.8
AP002884.3-204ENST00000529938 CNTNAP1P78357 1384 aa20.01■□□□□ 0.79
AP002884.3-204ENST00000529938 DDX10Q13206 875 aaKnown RBP20.01■□□□□ 0.79
AP002884.3-204ENST00000529938 RSPH6AQ9H0K4 717 aa20.01■□□□□ 0.79
AP002884.3-204ENST00000529938 TIAM2Q8IVF5 1701 aa20■□□□□ 0.79
AP002884.3-204ENST00000529938 C2CD5Q86YS7 1000 aa20■□□□□ 0.79
AP002884.3-204ENST00000529938 GAS2L2Q8NHY3 880 aa20■□□□□ 0.79
AP002884.3-204ENST00000529938 AIDAQ96BJ3 306 aa20■□□□□ 0.79
AP002884.3-204ENST00000529938 ADAMTS7Q9UKP4 1686 aa20■□□□□ 0.79
AP002884.3-204ENST00000529938 IL17REQ8NFR9 667 aa19.99■□□□□ 0.79
AP002884.3-204ENST00000529938 GNAT3A8MTJ3 354 aa19.98■□□□□ 0.79
AP002884.3-204ENST00000529938 H0YIN7 160 aa19.98■□□□□ 0.79
AP002884.3-204ENST00000529938 SERPINB2P05120 415 aa19.98■□□□□ 0.79
AP002884.3-204ENST00000529938 POTEIP0CG38 1075 aa19.98■□□□□ 0.79
AP002884.3-204ENST00000529938 POTEJP0CG39 1038 aa19.98■□□□□ 0.79
AP002884.3-204ENST00000529938 ERFEQ4G0M1 354 aa19.98■□□□□ 0.79
AP002884.3-204ENST00000529938 SOS1Q07889 1333 aaPredicted RBP19.98■□□□□ 0.79
AP002884.3-204ENST00000529938 SCN11AQ9UI33 1791 aa19.98■□□□□ 0.79
AP002884.3-204ENST00000529938 AFDNP55196 1824 aaKnown RBP19.97■□□□□ 0.79
AP002884.3-204ENST00000529938 FAM161AQ3B820 660 aa19.97■□□□□ 0.79
AP002884.3-204ENST00000529938 PCDH10Q9P2E7 1040 aa19.97■□□□□ 0.79
AP002884.3-204ENST00000529938 NARFQ9UHQ1 456 aa19.97■□□□□ 0.79
AP002884.3-204ENST00000529938 DLEC1Q9Y238 1755 aa19.96■□□□□ 0.79
AP002884.3-204ENST00000529938 VEGFBP49765 207 aa19.96■□□□□ 0.79
AP002884.3-204ENST00000529938 LBX1P52954 281 aa19.96■□□□□ 0.79
AP002884.3-204ENST00000529938 DNAJC10Q8IXB1 793 aa19.96■□□□□ 0.79
AP002884.3-204ENST00000529938 WBP1LQ9NX94 342 aa19.96■□□□□ 0.79
AP002884.3-204ENST00000529938 TJP1Q07157 1748 aa19.96■□□□□ 0.79
AP002884.3-204ENST00000529938 NRXN2Q9P2S2 1712 aa19.96■□□□□ 0.79
AP002884.3-204ENST00000529938 ABHD8Q96I13 439 aa19.95■□□□□ 0.78
AP002884.3-204ENST00000529938 BCL2L12Q9HB09 334 aa19.95■□□□□ 0.78
AP002884.3-204ENST00000529938 PASKQ96RG2 1323 aa19.95■□□□□ 0.78
AP002884.3-204ENST00000529938 DDNO94850 711 aaPredicted RBP19.94■□□□□ 0.78
AP002884.3-204ENST00000529938 TEFQ10587 303 aa19.94■□□□□ 0.78
AP002884.3-204ENST00000529938 MRC1P22897 1456 aa19.93■□□□□ 0.78
AP002884.3-204ENST00000529938 CYP19A1P11511 503 aaPredicted RBP19.93■□□□□ 0.78
AP002884.3-204ENST00000529938 C21orf2O43822 256 aa19.92■□□□□ 0.78
AP002884.3-204ENST00000529938 ZNF622Q969S3 477 aaKnown RBP eCLIP19.92■□□□□ 0.78
AP002884.3-204ENST00000529938 CARMIL3Q8ND23 1372 aa19.92■□□□□ 0.78
AP002884.3-204ENST00000529938 DICER1Q9UPY3 1922 aaKnown RBP19.92■□□□□ 0.78
AP002884.3-204ENST00000529938 TMEM88BA6NKF7 163 aa19.91■□□□□ 0.78
AP002884.3-204ENST00000529938 LDHDQ86WU2 507 aa19.91■□□□□ 0.78
AP002884.3-204ENST00000529938 ZNF219Q9P2Y4 722 aaPredicted RBP19.91■□□□□ 0.78
AP002884.3-204ENST00000529938 RALBP1Q15311 655 aa19.9■□□□□ 0.78
AP002884.3-204ENST00000529938 TTC5Q8N0Z6 440 aa19.9■□□□□ 0.78
AP002884.3-204ENST00000529938 PDZRN3Q9UPQ7 1066 aa19.9■□□□□ 0.78
AP002884.3-204ENST00000529938 LTBP3Q9NS15 1303 aa19.9■□□□□ 0.78
AP002884.3-204ENST00000529938 COL15A1P39059 1388 aa19.9■□□□□ 0.78
AP002884.3-204ENST00000529938 IQCA1LA6NCM1 817 aa19.89■□□□□ 0.77
AP002884.3-204ENST00000529938 ITGBL1O95965 494 aaPredicted RBP19.89■□□□□ 0.77
AP002884.3-204ENST00000529938 HSPA8P11142 646 aaKnown RBP19.89■□□□□ 0.77
AP002884.3-204ENST00000529938 MCM10Q7L590 875 aa19.89■□□□□ 0.77
AP002884.3-204ENST00000529938 ZBTB1Q9Y2K1 713 aa19.89■□□□□ 0.77
AP002884.3-204ENST00000529938 FER1L6Q2WGJ9 1857 aa19.88■□□□□ 0.77
AP002884.3-204ENST00000529938 DCTN1Q14203 1278 aa19.88■□□□□ 0.77
AP002884.3-204ENST00000529938 ZNF790Q6PG37 636 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms