RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 MRC1P22897 1456 aa21.9■■□□□ 1.1
COL16A1-216ENST00000529928 CYP19A1P11511 503 aaPredicted RBP21.89■■□□□ 1.09
COL16A1-216ENST00000529928 HTRA3P83110 453 aa21.89■■□□□ 1.09
COL16A1-216ENST00000529928 JMYQ8N9B5 988 aa21.89■■□□□ 1.09
COL16A1-216ENST00000529928 NARFQ9UHQ1 456 aa21.89■■□□□ 1.09
COL16A1-216ENST00000529928 COL15A1P39059 1388 aa21.88■■□□□ 1.09
COL16A1-216ENST00000529928 SMC1BQ8NDV3 1235 aa21.88■■□□□ 1.09
COL16A1-216ENST00000529928 LGR6Q9HBX8 967 aa21.88■■□□□ 1.09
COL16A1-216ENST00000529928 NFIXQ14938 502 aa21.87■■□□□ 1.09
COL16A1-216ENST00000529928 NRXN2Q9P2S2 1712 aa21.86■■□□□ 1.09
COL16A1-216ENST00000529928 RNMTO43148 476 aaKnown RBP21.86■■□□□ 1.09
COL16A1-216ENST00000529928 LMNB1P20700 586 aa21.86■■□□□ 1.09
COL16A1-216ENST00000529928 SLC39A6Q13433 755 aa21.86■■□□□ 1.09
COL16A1-216ENST00000529928 AFDNP55196 1824 aaKnown RBP21.85■■□□□ 1.09
COL16A1-216ENST00000529928 RASSF7Q02833 373 aa21.85■■□□□ 1.09
COL16A1-216ENST00000529928 VSIG10Q8N0Z9 540 aa21.85■■□□□ 1.09
COL16A1-216ENST00000529928 ZBTB1Q9Y2K1 713 aa21.85■■□□□ 1.09
COL16A1-216ENST00000529928 SERPINB2P05120 415 aa21.84■■□□□ 1.09
COL16A1-216ENST00000529928 TTLL6Q8N841 843 aa21.84■■□□□ 1.09
COL16A1-216ENST00000529928 DLEC1Q9Y238 1755 aa21.84■■□□□ 1.09
COL16A1-216ENST00000529928 PCGF6Q9BYE7 350 aa21.83■■□□□ 1.09
COL16A1-216ENST00000529928 GLTPD2A6NH11 291 aa21.82■■□□□ 1.08
COL16A1-216ENST00000529928 HMOX1P09601 288 aa21.82■■□□□ 1.08
COL16A1-216ENST00000529928 BCL2L12Q9HB09 334 aa21.82■■□□□ 1.08
COL16A1-216ENST00000529928 VIRMAQ69YN4 1812 aaKnown RBP21.81■■□□□ 1.08
COL16A1-216ENST00000529928 VEGFAP15692 232 aaPredicted RBP21.81■■□□□ 1.08
COL16A1-216ENST00000529928 AMER1Q5JTC6 1135 aaPredicted RBP21.81■■□□□ 1.08
COL16A1-216ENST00000529928 H0YIN7 160 aa21.8■■□□□ 1.08
COL16A1-216ENST00000529928 MTHFSDQ2M296 383 aaKnown RBP21.8■■□□□ 1.08
COL16A1-216ENST00000529928 COL13A1Q5TAT6 717 aaPredicted RBP21.8■■□□□ 1.08
COL16A1-216ENST00000529928 C2CD5Q86YS7 1000 aa21.8■■□□□ 1.08
COL16A1-216ENST00000529928 PRELPP51888 382 aa21.79■■□□□ 1.08
COL16A1-216ENST00000529928 UBR2Q8IWV8 1755 aa21.79■■□□□ 1.08
COL16A1-216ENST00000529928 STARD3NLO95772 234 aa21.78■■□□□ 1.08
COL16A1-216ENST00000529928 CANXP27824 592 aaKnown RBP21.78■■□□□ 1.08
COL16A1-216ENST00000529928 TTC5Q8N0Z6 440 aa21.78■■□□□ 1.08
COL16A1-216ENST00000529928 TIAM2Q8IVF5 1701 aa21.77■■□□□ 1.08
COL16A1-216ENST00000529928 CARMIL3Q8ND23 1372 aa21.77■■□□□ 1.08
COL16A1-216ENST00000529928 A0A087WZG4 1122 aa21.77■■□□□ 1.08
COL16A1-216ENST00000529928 NFKBIEO00221 500 aa21.76■■□□□ 1.07
COL16A1-216ENST00000529928 DIAPH1O60610 1272 aaKnown RBP21.76■■□□□ 1.07
COL16A1-216ENST00000529928 EIF5P55010 431 aaKnown RBP21.76■■□□□ 1.07
COL16A1-216ENST00000529928 BICDL1Q6ZP65 573 aa21.76■■□□□ 1.07
COL16A1-216ENST00000529928 PDZRN3Q9UPQ7 1066 aa21.76■■□□□ 1.07
COL16A1-216ENST00000529928 DPY19L2Q6NUT2 758 aa21.75■■□□□ 1.07
COL16A1-216ENST00000529928 PDE6BP35913 854 aa21.73■■□□□ 1.07
COL16A1-216ENST00000529928 BRIP1Q9BX63 1249 aa21.73■■□□□ 1.07
COL16A1-216ENST00000529928 TEX13AQ9BXU3 409 aaPredicted RBP21.73■■□□□ 1.07
COL16A1-216ENST00000529928 CCDC88AQ3V6T2 1871 aa21.73■■□□□ 1.07
COL16A1-216ENST00000529928 TBC1D9BQ66K14 1250 aa21.72■■□□□ 1.07
COL16A1-216ENST00000529928 TNS4Q8IZW8 715 aa21.72■■□□□ 1.07
COL16A1-216ENST00000529928 TEFQ10587 303 aa21.71■■□□□ 1.07
COL16A1-216ENST00000529928 ZNF790Q6PG37 636 aa21.71■■□□□ 1.07
COL16A1-216ENST00000529928 ZNF622Q969S3 477 aaKnown RBP eCLIP21.71■■□□□ 1.07
COL16A1-216ENST00000529928 ZNF496Q96IT1 587 aaPredicted RBP21.71■■□□□ 1.07
COL16A1-216ENST00000529928 SCN7AQ01118 1682 aa21.71■■□□□ 1.07
COL16A1-216ENST00000529928 HEG1Q9ULI3 1381 aa21.71■■□□□ 1.07
COL16A1-216ENST00000529928 ERFEQ4G0M1 354 aa21.7■■□□□ 1.06
COL16A1-216ENST00000529928 KIF7Q2M1P5 1343 aa21.7■■□□□ 1.06
COL16A1-216ENST00000529928 ANKRD31Q8N7Z5 1873 aa21.7■■□□□ 1.06
COL16A1-216ENST00000529928 GNAT3A8MTJ3 354 aa21.69■■□□□ 1.06
COL16A1-216ENST00000529928 POTECB2RU33 542 aa21.69■■□□□ 1.06
COL16A1-216ENST00000529928 C21orf2O43822 256 aa21.69■■□□□ 1.06
COL16A1-216ENST00000529928 IL6STP40189 918 aaPredicted RBP21.69■■□□□ 1.06
COL16A1-216ENST00000529928 PRR5LQ6MZQ0 368 aa21.69■■□□□ 1.06
COL16A1-216ENST00000529928 ZNF330Q9Y3S2 320 aaPredicted RBP21.69■■□□□ 1.06
COL16A1-216ENST00000529928 HSPA1AP0DMV8 641 aaKnown RBP21.68■■□□□ 1.06
COL16A1-216ENST00000529928 HSPA1BP0DMV9 641 aaKnown RBP21.68■■□□□ 1.06
COL16A1-216ENST00000529928 NPM2Q86SE8 214 aaKnown RBP21.68■■□□□ 1.06
COL16A1-216ENST00000529928 GAS2L2Q8NHY3 880 aa21.68■■□□□ 1.06
COL16A1-216ENST00000529928 TBC1D2BQ9UPU7 963 aa21.68■■□□□ 1.06
COL16A1-216ENST00000529928 FER1L6Q2WGJ9 1857 aa21.67■■□□□ 1.06
COL16A1-216ENST00000529928 COL11A2P13942 1736 aaPredicted RBP21.67■■□□□ 1.06
COL16A1-216ENST00000529928 LTBP3Q9NS15 1303 aa21.67■■□□□ 1.06
COL16A1-216ENST00000529928 PER1O15534 1290 aaPredicted RBP21.67■■□□□ 1.06
COL16A1-216ENST00000529928 CAPN15O75808 1086 aa21.67■■□□□ 1.06
COL16A1-216ENST00000529928 CC2D1BQ5T0F9 858 aaKnown RBP21.67■■□□□ 1.06
COL16A1-216ENST00000529928 ZNF219Q9P2Y4 722 aaPredicted RBP21.67■■□□□ 1.06
COL16A1-216ENST00000529928 PCNTO95613 3336 aa21.66■■□□□ 1.06
COL16A1-216ENST00000529928 NPHP1O15259 732 aa21.66■■□□□ 1.06
COL16A1-216ENST00000529928 IL17REQ8NFR9 667 aa21.66■■□□□ 1.06
COL16A1-216ENST00000529928 FMNL2Q96PY5 1086 aa21.66■■□□□ 1.06
COL16A1-216ENST00000529928 SETDB2Q96T68 719 aa21.66■■□□□ 1.06
COL16A1-216ENST00000529928 TAOK3Q9H2K8 898 aa21.66■■□□□ 1.06
COL16A1-216ENST00000529928 DICER1Q9UPY3 1922 aaKnown RBP21.66■■□□□ 1.06
COL16A1-216ENST00000529928 U2SURPO15042 1029 aaKnown RBP21.65■■□□□ 1.06
COL16A1-216ENST00000529928 CNBD1Q8NA66 436 aa21.65■■□□□ 1.06
COL16A1-216ENST00000529928 CNKSR1Q969H4 720 aa21.65■■□□□ 1.06
COL16A1-216ENST00000529928 SIPA1L3O60292 1781 aaPredicted RBP21.65■■□□□ 1.06
COL16A1-216ENST00000529928 COL3A1P02461 1466 aaPredicted RBP21.64■■□□□ 1.06
COL16A1-216ENST00000529928 ST5P78524 1137 aa21.64■■□□□ 1.05
COL16A1-216ENST00000529928 SOGA3Q5TF21 947 aa21.64■■□□□ 1.05
COL16A1-216ENST00000529928 CCDC24Q8N4L8 307 aa21.64■■□□□ 1.05
COL16A1-216ENST00000529928 STYK1Q6J9G0 422 aa21.63■■□□□ 1.05
COL16A1-216ENST00000529928 CAMTA2O94983 1202 aa21.62■■□□□ 1.05
COL16A1-216ENST00000529928 A1BGP04217 495 aa21.62■■□□□ 1.05
COL16A1-216ENST00000529928 CHADLQ6NUI6 762 aa21.62■■□□□ 1.05
COL16A1-216ENST00000529928 PRPF40BQ6NWY9 871 aaKnown RBP21.62■■□□□ 1.05
COL16A1-216ENST00000529928 CCER1Q8TC90 406 aaPredicted RBP21.62■■□□□ 1.05
COL16A1-216ENST00000529928 CREBZFQ9NS37 354 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms