RNA–Protein interactions for RNA: ENST00000529851.5

APLF-206, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,863 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-206ENST00000529851 PXDNLA1KZ92 1463 aa19.38■□□□□ 0.69
APLF-206ENST00000529851 ONECUT3O60422 494 aaPredicted RBP19.38■□□□□ 0.69
APLF-206ENST00000529851 VAMP4O75379 141 aa19.38■□□□□ 0.69
APLF-206ENST00000529851 IGHDP01880 384 aa19.38■□□□□ 0.69
APLF-206ENST00000529851 CANXP27824 592 aaKnown RBP19.38■□□□□ 0.69
APLF-206ENST00000529851 PDIA4P13667 645 aaKnown RBP19.38■□□□□ 0.69
APLF-206ENST00000529851 TSR2Q969E8 191 aaKnown RBP19.37■□□□□ 0.69
APLF-206ENST00000529851 SLC52A2Q9HAB3 445 aa19.37■□□□□ 0.69
APLF-206ENST00000529851 GAS2L3Q86XJ1 694 aa19.37■□□□□ 0.69
APLF-206ENST00000529851 RREB1Q92766 1687 aa19.37■□□□□ 0.69
APLF-206ENST00000529851 ZBTB7CA1YPR0 619 aa19.36■□□□□ 0.69
APLF-206ENST00000529851 HSPA1LP34931 641 aa19.36■□□□□ 0.69
APLF-206ENST00000529851 EXOSC9Q06265 439 aaKnown RBP19.36■□□□□ 0.69
APLF-206ENST00000529851 R3HCC1Q9Y3T6 440 aaKnown RBP19.36■□□□□ 0.69
APLF-206ENST00000529851 NHSQ6T4R5 1651 aa19.36■□□□□ 0.69
APLF-206ENST00000529851 CYP27B1O15528 508 aa19.35■□□□□ 0.69
APLF-206ENST00000529851 IPO8O15397 1037 aaKnown RBP19.35■□□□□ 0.69
APLF-206ENST00000529851 RLBP1P12271 317 aa19.35■□□□□ 0.69
APLF-206ENST00000529851 SMAP1Q8IYB5 467 aaPredicted RBP19.34■□□□□ 0.69
APLF-206ENST00000529851 MCM10Q7L590 875 aa19.34■□□□□ 0.69
APLF-206ENST00000529851 PTPRCP08575 1304 aa19.34■□□□□ 0.69
APLF-206ENST00000529851 KCPQ6ZWJ8 1503 aa19.34■□□□□ 0.69
APLF-206ENST00000529851 DOT1LQ8TEK3 1739 aa19.34■□□□□ 0.69
APLF-206ENST00000529851 TEFQ10587 303 aa19.33■□□□□ 0.69
APLF-206ENST00000529851 CHMP4BQ9H444 224 aaKnown RBP19.33■□□□□ 0.69
APLF-206ENST00000529851 TSPYL4Q9UJ04 414 aa19.33■□□□□ 0.69
APLF-206ENST00000529851 OFD1O75665 1012 aa19.33■□□□□ 0.68
APLF-206ENST00000529851 GTF2E1P29083 439 aaPredicted RBP19.33■□□□□ 0.68
APLF-206ENST00000529851 TWISTNBQ3B726 338 aaPredicted RBP19.33■□□□□ 0.68
APLF-206ENST00000529851 C5P01031 1676 aa19.32■□□□□ 0.68
APLF-206ENST00000529851 EIF4A1P60842 406 aaKnown RBP19.31■□□□□ 0.68
APLF-206ENST00000529851 MRPL50Q8N5N7 158 aaKnown RBP19.3■□□□□ 0.68
APLF-206ENST00000529851 MAP7D2Q96T17 732 aa19.3■□□□□ 0.68
APLF-206ENST00000529851 EXOC5O00471 708 aa19.29■□□□□ 0.68
APLF-206ENST00000529851 HMGB2P26583 209 aaKnown RBP19.29■□□□□ 0.68
APLF-206ENST00000529851 STRN4Q9NRL3 753 aa19.29■□□□□ 0.68
APLF-206ENST00000529851 MSNP26038 577 aaKnown RBP19.28■□□□□ 0.68
APLF-206ENST00000529851 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.28■□□□□ 0.68
APLF-206ENST00000529851 UPF2Q9HAU5 1272 aaKnown RBP19.28■□□□□ 0.68
APLF-206ENST00000529851 RGS12O14924 1447 aa19.28■□□□□ 0.68
APLF-206ENST00000529851 DCTN1Q14203 1278 aa19.28■□□□□ 0.68
APLF-206ENST00000529851 CCDC30Q5VVM6 783 aa19.28■□□□□ 0.68
APLF-206ENST00000529851 ZKSCAN2Q63HK3 967 aa19.28■□□□□ 0.68
APLF-206ENST00000529851 ZSCAN30Q86W11 494 aa19.28■□□□□ 0.68
APLF-206ENST00000529851 LGR6Q9HBX8 967 aa19.28■□□□□ 0.68
APLF-206ENST00000529851 TRPC5Q9UL62 973 aaPredicted RBP19.28■□□□□ 0.68
APLF-206ENST00000529851 NAP1L2Q9ULW6 460 aaPredicted RBP19.28■□□□□ 0.68
APLF-206ENST00000529851 RGPD3A6NKT7 1758 aaPredicted RBP19.28■□□□□ 0.68
APLF-206ENST00000529851 RGPD4Q7Z3J3 1758 aa19.28■□□□□ 0.68
APLF-206ENST00000529851 BTBD11A6QL63 1104 aa19.27■□□□□ 0.68
APLF-206ENST00000529851 UQCRHLA0A096LP55 91 aa19.27■□□□□ 0.68
APLF-206ENST00000529851 UQCRHP07919 91 aa19.27■□□□□ 0.68
APLF-206ENST00000529851 THUMPD2Q9BTF0 503 aaKnown RBP19.27■□□□□ 0.68
APLF-206ENST00000529851 API5Q9BZZ5 524 aaKnown RBP19.27■□□□□ 0.68
APLF-206ENST00000529851 CHMP5Q9NZZ3 219 aa19.27■□□□□ 0.68
APLF-206ENST00000529851 SBF2Q86WG5 1849 aa19.27■□□□□ 0.67
APLF-206ENST00000529851 C8orf58Q8NAV2 365 aa19.26■□□□□ 0.67
APLF-206ENST00000529851 SSH1Q8WYL5 1049 aa19.26■□□□□ 0.67
APLF-206ENST00000529851 NGLY1Q96IV0 654 aa19.26■□□□□ 0.67
APLF-206ENST00000529851 TBC1D32Q96NH3 1257 aa19.26■□□□□ 0.67
APLF-206ENST00000529851 ABCC4O15439 1325 aa19.25■□□□□ 0.67
APLF-206ENST00000529851 ADAMTS2O95450 1211 aa19.25■□□□□ 0.67
APLF-206ENST00000529851 ZNF790Q6PG37 636 aa19.25■□□□□ 0.67
APLF-206ENST00000529851 TEX13AQ9BXU3 409 aaPredicted RBP19.25■□□□□ 0.67
APLF-206ENST00000529851 USP21Q9UK80 565 aa19.25■□□□□ 0.67
APLF-206ENST00000529851 TJP1Q07157 1748 aa19.24■□□□□ 0.67
APLF-206ENST00000529851 MPRIPQ6WCQ1 1025 aa19.24■□□□□ 0.67
APLF-206ENST00000529851 PCDHB15Q9Y5E8 787 aa19.24■□□□□ 0.67
APLF-206ENST00000529851 ATF7IPQ6VMQ6 1270 aa19.24■□□□□ 0.67
APLF-206ENST00000529851 ATP10DQ9P241 1426 aa19.23■□□□□ 0.67
APLF-206ENST00000529851 COL5A3P25940 1745 aaPredicted RBP19.23■□□□□ 0.67
APLF-206ENST00000529851 LY75O60449 1722 aa19.23■□□□□ 0.67
APLF-206ENST00000529851 DDX11L8A8MPP1 907 aa19.22■□□□□ 0.67
APLF-206ENST00000529851 CABP4P57796 275 aa19.22■□□□□ 0.67
APLF-206ENST00000529851 DDB1Q16531 1140 aa19.22■□□□□ 0.67
APLF-206ENST00000529851 ZNF772Q68DY9 489 aaPredicted RBP19.22■□□□□ 0.67
APLF-206ENST00000529851 SMC4Q9NTJ3 1288 aa19.22■□□□□ 0.67
APLF-206ENST00000529851 RGL2O15211 777 aa19.22■□□□□ 0.67
APLF-206ENST00000529851 GIGYF1O75420 1035 aaPredicted RBP19.22■□□□□ 0.67
APLF-206ENST00000529851 DMTNQ08495 405 aa19.22■□□□□ 0.67
APLF-206ENST00000529851 GJD4Q96KN9 370 aaPredicted RBP19.22■□□□□ 0.67
APLF-206ENST00000529851 FMNL2Q96PY5 1086 aa19.22■□□□□ 0.67
APLF-206ENST00000529851 ISY1Q9ULR0 285 aaKnown RBP19.22■□□□□ 0.67
APLF-206ENST00000529851 AFF2P51816 1311 aa19.21■□□□□ 0.67
APLF-206ENST00000529851 NUTM2BA6NNL0 878 aaPredicted RBP19.21■□□□□ 0.67
APLF-206ENST00000529851 NUTM2EB1AL46 878 aaPredicted RBP19.21■□□□□ 0.67
APLF-206ENST00000529851 NUTM2AQ8IVF1 878 aaPredicted RBP19.21■□□□□ 0.67
APLF-206ENST00000529851 TSPYL6Q8N831 410 aa19.2■□□□□ 0.66
APLF-206ENST00000529851 CCDC173Q0VFZ6 552 aa19.19■□□□□ 0.66
APLF-206ENST00000529851 SNRPA1P09661 255 aaKnown RBP19.19■□□□□ 0.66
APLF-206ENST00000529851 ZSCAN20P17040 1043 aaPredicted RBP19.19■□□□□ 0.66
APLF-206ENST00000529851 NASPP49321 788 aaPredicted RBP19.19■□□□□ 0.66
APLF-206ENST00000529851 C8orf37Q96NL8 207 aa19.19■□□□□ 0.66
APLF-206ENST00000529851 NUP188Q5SRE5 1749 aa19.19■□□□□ 0.66
APLF-206ENST00000529851 INTS3Q68E01 1043 aaKnown RBP19.18■□□□□ 0.66
APLF-206ENST00000529851 STK31Q9BXU1 1019 aa19.18■□□□□ 0.66
APLF-206ENST00000529851 MEX3CQ5U5Q3 659 aaKnown RBP19.18■□□□□ 0.66
APLF-206ENST00000529851 DZIP1LQ8IYY4 767 aaKnown RBP19.18■□□□□ 0.66
APLF-206ENST00000529851 TERF1P54274 439 aa19.18■□□□□ 0.66
APLF-206ENST00000529851 HYPKQ9NX55 129 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms