RNA–Protein interactions for RNA: ENST00000529573.1

PDZD3-211, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-211ENST00000529573 ZPR1O75312 459 aa13.52□□□□□ -0.25
PDZD3-211ENST00000529573 HSPA5P11021 654 aaKnown RBP13.52□□□□□ -0.25
PDZD3-211ENST00000529573 CYP19A1P11511 503 aaPredicted RBP13.52□□□□□ -0.25
PDZD3-211ENST00000529573 EIF4G2P78344 907 aaKnown RBP eCLIP13.52□□□□□ -0.25
PDZD3-211ENST00000529573 NRXN2Q9P2S2 1712 aa13.52□□□□□ -0.25
PDZD3-211ENST00000529573 AFDNP55196 1824 aaKnown RBP13.51□□□□□ -0.25
PDZD3-211ENST00000529573 NFIXQ14938 502 aa13.51□□□□□ -0.25
PDZD3-211ENST00000529573 LGR6Q9HBX8 967 aa13.51□□□□□ -0.25
PDZD3-211ENST00000529573 NARFQ9UHQ1 456 aa13.51□□□□□ -0.25
PDZD3-211ENST00000529573 COL15A1P39059 1388 aa13.5□□□□□ -0.25
PDZD3-211ENST00000529573 PRELPP51888 382 aa13.5□□□□□ -0.25
PDZD3-211ENST00000529573 RASSF7Q02833 373 aa13.5□□□□□ -0.25
PDZD3-211ENST00000529573 SMC1BQ8NDV3 1235 aa13.5□□□□□ -0.25
PDZD3-211ENST00000529573 BCL2L12Q9HB09 334 aa13.5□□□□□ -0.25
PDZD3-211ENST00000529573 DLEC1Q9Y238 1755 aa13.5□□□□□ -0.25
PDZD3-211ENST00000529573 RNMTO43148 476 aaKnown RBP13.49□□□□□ -0.25
PDZD3-211ENST00000529573 SLC39A6Q13433 755 aa13.49□□□□□ -0.25
PDZD3-211ENST00000529573 ZBTB1Q9Y2K1 713 aa13.49□□□□□ -0.25
PDZD3-211ENST00000529573 GLTPD2A6NH11 291 aa13.48□□□□□ -0.25
PDZD3-211ENST00000529573 LMNB1P20700 586 aa13.48□□□□□ -0.25
PDZD3-211ENST00000529573 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
PDZD3-211ENST00000529573 COL13A1Q5TAT6 717 aaPredicted RBP13.48□□□□□ -0.25
PDZD3-211ENST00000529573 VSIG10Q8N0Z9 540 aa13.48□□□□□ -0.25
PDZD3-211ENST00000529573 KNSTRNQ9Y448 316 aa13.48□□□□□ -0.25
PDZD3-211ENST00000529573 SERPINB2P05120 415 aa13.47□□□□□ -0.25
PDZD3-211ENST00000529573 VEGFAP15692 232 aaPredicted RBP13.47□□□□□ -0.25
PDZD3-211ENST00000529573 TTLL6Q8N841 843 aa13.47□□□□□ -0.25
PDZD3-211ENST00000529573 VIRMAQ69YN4 1812 aaKnown RBP13.47□□□□□ -0.25
PDZD3-211ENST00000529573 CARMIL3Q8ND23 1372 aa13.46□□□□□ -0.25
PDZD3-211ENST00000529573 UBR2Q8IWV8 1755 aa13.46□□□□□ -0.25
PDZD3-211ENST00000529573 NFKBIEO00221 500 aa13.46□□□□□ -0.25
PDZD3-211ENST00000529573 HMOX1P09601 288 aa13.45□□□□□ -0.26
PDZD3-211ENST00000529573 EIF5P55010 431 aaKnown RBP13.45□□□□□ -0.26
PDZD3-211ENST00000529573 MTHFSDQ2M296 383 aaKnown RBP13.45□□□□□ -0.26
PDZD3-211ENST00000529573 C2CD5Q86YS7 1000 aa13.45□□□□□ -0.26
PDZD3-211ENST00000529573 TIAM2Q8IVF5 1701 aa13.44□□□□□ -0.26
PDZD3-211ENST00000529573 H0YIN7 160 aa13.44□□□□□ -0.26
PDZD3-211ENST00000529573 CCDC88AQ3V6T2 1871 aa13.44□□□□□ -0.26
PDZD3-211ENST00000529573 POTECB2RU33 542 aa13.43□□□□□ -0.26
PDZD3-211ENST00000529573 STARD3NLO95772 234 aa13.43□□□□□ -0.26
PDZD3-211ENST00000529573 CANXP27824 592 aaKnown RBP13.43□□□□□ -0.26
PDZD3-211ENST00000529573 ANKRD31Q8N7Z5 1873 aa13.43□□□□□ -0.26
PDZD3-211ENST00000529573 PCGF6Q9BYE7 350 aa13.42□□□□□ -0.26
PDZD3-211ENST00000529573 PDZRN3Q9UPQ7 1066 aa13.42□□□□□ -0.26
PDZD3-211ENST00000529573 SCN7AQ01118 1682 aa13.41□□□□□ -0.26
PDZD3-211ENST00000529573 A0A087WZG4 1122 aa13.41□□□□□ -0.26
PDZD3-211ENST00000529573 DIAPH1O60610 1272 aaKnown RBP13.41□□□□□ -0.26
PDZD3-211ENST00000529573 TBC1D9BQ66K14 1250 aa13.41□□□□□ -0.26
PDZD3-211ENST00000529573 BICDL1Q6ZP65 573 aa13.41□□□□□ -0.26
PDZD3-211ENST00000529573 BRIP1Q9BX63 1249 aa13.41□□□□□ -0.26
PDZD3-211ENST00000529573 FER1L6Q2WGJ9 1857 aa13.4□□□□□ -0.26
PDZD3-211ENST00000529573 COL11A2P13942 1736 aaPredicted RBP13.4□□□□□ -0.26
PDZD3-211ENST00000529573 TNS4Q8IZW8 715 aa13.4□□□□□ -0.26
PDZD3-211ENST00000529573 TTC5Q8N0Z6 440 aa13.4□□□□□ -0.26
PDZD3-211ENST00000529573 ZNF496Q96IT1 587 aaPredicted RBP13.4□□□□□ -0.26
PDZD3-211ENST00000529573 DICER1Q9UPY3 1922 aaKnown RBP13.39□□□□□ -0.27
PDZD3-211ENST00000529573 PER1O15534 1290 aaPredicted RBP13.39□□□□□ -0.27
PDZD3-211ENST00000529573 C21orf2O43822 256 aa13.39□□□□□ -0.27
PDZD3-211ENST00000529573 HSPA1AP0DMV8 641 aaKnown RBP13.39□□□□□ -0.27
PDZD3-211ENST00000529573 HSPA1BP0DMV9 641 aaKnown RBP13.39□□□□□ -0.27
PDZD3-211ENST00000529573 PDE6BP35913 854 aa13.39□□□□□ -0.27
PDZD3-211ENST00000529573 PRR5LQ6MZQ0 368 aa13.39□□□□□ -0.27
PDZD3-211ENST00000529573 DPY19L2Q6NUT2 758 aa13.39□□□□□ -0.27
PDZD3-211ENST00000529573 ZNF790Q6PG37 636 aa13.39□□□□□ -0.27
PDZD3-211ENST00000529573 IL17REQ8NFR9 667 aa13.39□□□□□ -0.27
PDZD3-211ENST00000529573 ZNF622Q969S3 477 aaKnown RBP eCLIP13.39□□□□□ -0.27
PDZD3-211ENST00000529573 TEX13AQ9BXU3 409 aaPredicted RBP13.39□□□□□ -0.27
PDZD3-211ENST00000529573 HEG1Q9ULI3 1381 aa13.39□□□□□ -0.27
PDZD3-211ENST00000529573 SIPA1L3O60292 1781 aaPredicted RBP13.39□□□□□ -0.27
PDZD3-211ENST00000529573 KIF7Q2M1P5 1343 aa13.39□□□□□ -0.27
PDZD3-211ENST00000529573 LTBP3Q9NS15 1303 aa13.39□□□□□ -0.27
PDZD3-211ENST00000529573 COL3A1P02461 1466 aaPredicted RBP13.38□□□□□ -0.27
PDZD3-211ENST00000529573 IL6STP40189 918 aaPredicted RBP13.38□□□□□ -0.27
PDZD3-211ENST00000529573 ERFEQ4G0M1 354 aa13.38□□□□□ -0.27
PDZD3-211ENST00000529573 CAPN15O75808 1086 aa13.37□□□□□ -0.27
PDZD3-211ENST00000529573 TEFQ10587 303 aa13.37□□□□□ -0.27
PDZD3-211ENST00000529573 CCDC24Q8N4L8 307 aa13.37□□□□□ -0.27
PDZD3-211ENST00000529573 TBC1D2BQ9UPU7 963 aa13.37□□□□□ -0.27
PDZD3-211ENST00000529573 GNAT3A8MTJ3 354 aa13.36□□□□□ -0.27
PDZD3-211ENST00000529573 CAMTA2O94983 1202 aa13.36□□□□□ -0.27
PDZD3-211ENST00000529573 GAS2L2Q8NHY3 880 aa13.36□□□□□ -0.27
PDZD3-211ENST00000529573 ZNF219Q9P2Y4 722 aaPredicted RBP13.36□□□□□ -0.27
PDZD3-211ENST00000529573 CEMIPQ8WUJ3 1361 aa13.35□□□□□ -0.27
PDZD3-211ENST00000529573 SLX4Q8IY92 1834 aa13.35□□□□□ -0.27
PDZD3-211ENST00000529573 A1BGP04217 495 aa13.35□□□□□ -0.27
PDZD3-211ENST00000529573 SRGNP10124 158 aa13.35□□□□□ -0.27
PDZD3-211ENST00000529573 CC2D1BQ5T0F9 858 aaKnown RBP13.35□□□□□ -0.27
PDZD3-211ENST00000529573 STYK1Q6J9G0 422 aa13.35□□□□□ -0.27
PDZD3-211ENST00000529573 CHADLQ6NUI6 762 aa13.35□□□□□ -0.27
PDZD3-211ENST00000529573 CNBD1Q8NA66 436 aa13.35□□□□□ -0.27
PDZD3-211ENST00000529573 CNKSR1Q969H4 720 aa13.35□□□□□ -0.27
PDZD3-211ENST00000529573 FMNL2Q96PY5 1086 aa13.35□□□□□ -0.27
PDZD3-211ENST00000529573 SETDB2Q96T68 719 aa13.35□□□□□ -0.27
PDZD3-211ENST00000529573 TAOK3Q9H2K8 898 aa13.35□□□□□ -0.27
PDZD3-211ENST00000529573 CREBZFQ9NS37 354 aa13.35□□□□□ -0.27
PDZD3-211ENST00000529573 ARFGEF2Q9Y6D5 1785 aa13.35□□□□□ -0.27
PDZD3-211ENST00000529573 NPC1L1Q9UHC9 1359 aa13.34□□□□□ -0.27
PDZD3-211ENST00000529573 DDNO94850 711 aaPredicted RBP13.34□□□□□ -0.27
PDZD3-211ENST00000529573 PRPF40BQ6NWY9 871 aaKnown RBP13.34□□□□□ -0.27
PDZD3-211ENST00000529573 ZNF330Q9Y3S2 320 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms