RNA–Protein interactions for RNA: ENST00000529373.1

UBTF-208, Transcript of upstream binding transcription factor, human

TSL 2

Gene UBTF, Length 674 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBTF-208	ENST00000529373	ZNF496	Q96IT1	587 aa	Predicted RBP	27.96	■■■□□ 2.07
UBTF-208	ENST00000529373	AFDN	P55196	1824 aa	Known RBP	27.95	■■■□□ 2.07
UBTF-208	ENST00000529373	USPL1	Q5W0Q7	1092 aa		27.95	■■■□□ 2.06
UBTF-208	ENST00000529373	ZNF790	Q6PG37	636 aa		27.95	■■■□□ 2.06
UBTF-208	ENST00000529373	NRXN2	Q9P2S2	1712 aa		27.94	■■■□□ 2.06
UBTF-208	ENST00000529373	HEG1	Q9ULI3	1381 aa		27.94	■■■□□ 2.06
UBTF-208	ENST00000529373	DPEP1	P16444	411 aa		27.93	■■■□□ 2.06
UBTF-208	ENST00000529373	ARFGEF1	Q9Y6D6	1849 aa		27.92	■■■□□ 2.06
UBTF-208	ENST00000529373	SCN7A	Q01118	1682 aa		27.92	■■■□□ 2.06
UBTF-208	ENST00000529373	POLRMT	O00411	1230 aa	Known RBP	27.92	■■■□□ 2.06
UBTF-208	ENST00000529373	ZPR1	O75312	459 aa		27.92	■■■□□ 2.06
UBTF-208	ENST00000529373	TM4SF1	P30408	202 aa		27.92	■■■□□ 2.06
UBTF-208	ENST00000529373	NARF	Q9UHQ1	456 aa		27.92	■■■□□ 2.06
UBTF-208	ENST00000529373	FCHSD2	O94868	740 aa		27.91	■■■□□ 2.06
UBTF-208	ENST00000529373	BCL2L12	Q9HB09	334 aa		27.91	■■■□□ 2.06
UBTF-208	ENST00000529373	KCNA3	P22001	575 aa		27.9	■■■□□ 2.06
UBTF-208	ENST00000529373	KCNQ3	O43525	872 aa		27.89	■■■□□ 2.06
UBTF-208	ENST00000529373	CANX	P27824	592 aa	Known RBP	27.89	■■■□□ 2.06
UBTF-208	ENST00000529373	DLG5	Q8TDM6	1919 aa		27.88	■■■□□ 2.05
UBTF-208	ENST00000529373	STARD3NL	O95772	234 aa		27.88	■■■□□ 2.05
UBTF-208	ENST00000529373	C1QTNF8	P60827	252 aa		27.88	■■■□□ 2.05
UBTF-208	ENST00000529373	BCS1L	Q9Y276	419 aa		27.88	■■■□□ 2.05
UBTF-208	ENST00000529373	GIGYF1	O75420	1035 aa	Predicted RBP	27.87	■■■□□ 2.05
UBTF-208	ENST00000529373	EIF5	P55010	431 aa	Known RBP	27.87	■■■□□ 2.05
UBTF-208	ENST00000529373	NFIX	Q14938	502 aa		27.87	■■■□□ 2.05
UBTF-208	ENST00000529373	BTBD11	A6QL63	1104 aa		27.86	■■■□□ 2.05
UBTF-208	ENST00000529373	MCM10	Q7L590	875 aa		27.86	■■■□□ 2.05
UBTF-208	ENST00000529373	FMNL2	Q96PY5	1086 aa		27.86	■■■□□ 2.05
UBTF-208	ENST00000529373	DLEC1	Q9Y238	1755 aa		27.84	■■■□□ 2.05
UBTF-208	ENST00000529373	TEX13A	Q9BXU3	409 aa	Predicted RBP	27.84	■■■□□ 2.05
UBTF-208	ENST00000529373	BCOR	Q6W2J9	1755 aa		27.83	■■■□□ 2.05
UBTF-208	ENST00000529373	CHRNA5	P30532	468 aa		27.82	■■■□□ 2.04
UBTF-208	ENST00000529373	DCTN1	Q14203	1278 aa		27.82	■■■□□ 2.04
UBTF-208	ENST00000529373	RTF1	Q92541	710 aa	Known RBP	27.81	■■■□□ 2.04
UBTF-208	ENST00000529373	A1BG	P04217	495 aa		27.8	■■■□□ 2.04
UBTF-208	ENST00000529373	PIM2	Q9P1W9	311 aa		27.8	■■■□□ 2.04
UBTF-208	ENST00000529373	ANKRD31	Q8N7Z5	1873 aa		27.79	■■■□□ 2.04
UBTF-208	ENST00000529373	CARMIL3	Q8ND23	1372 aa		27.79	■■■□□ 2.04
UBTF-208	ENST00000529373		A0A087WZG4	1122 aa		27.79	■■■□□ 2.04
UBTF-208	ENST00000529373	HTATSF1	O43719	755 aa	Known RBP	27.79	■■■□□ 2.04
UBTF-208	ENST00000529373	IL6ST	P40189	918 aa	Predicted RBP	27.79	■■■□□ 2.04
UBTF-208	ENST00000529373	ZNF526	Q8TF50	670 aa	Predicted RBP	27.79	■■■□□ 2.04
UBTF-208	ENST00000529373	CEP350	Q5VT06	3117 aa		27.79	■■■□□ 2.04
UBTF-208	ENST00000529373	KDM3B	Q7LBC6	1761 aa		27.78	■■■□□ 2.04
UBTF-208	ENST00000529373	PRAMEF22	A3QJZ6	481 aa		27.78	■■■□□ 2.04
UBTF-208	ENST00000529373	GPBP1L1	Q9HC44	474 aa	Predicted RBP	27.78	■■■□□ 2.04
UBTF-208	ENST00000529373	SERPINB2	P05120	415 aa		27.77	■■■□□ 2.04
UBTF-208	ENST00000529373	ARHGAP27	Q6ZUM4	889 aa		27.77	■■■□□ 2.04
UBTF-208	ENST00000529373	PLEKHF1	Q96S99	279 aa		27.77	■■■□□ 2.04
UBTF-208	ENST00000529373	ZNF330	Q9Y3S2	320 aa	Predicted RBP	27.77	■■■□□ 2.04
UBTF-208	ENST00000529373	LAMB4	A4D0S4	1761 aa		27.76	■■■□□ 2.03
UBTF-208	ENST00000529373	DALRD3	Q5D0E6	543 aa	Known RBP	27.76	■■■□□ 2.03
UBTF-208	ENST00000529373	TBC1D2B	Q9UPU7	963 aa		27.76	■■■□□ 2.03
UBTF-208	ENST00000529373	USP16	Q9Y5T5	823 aa		27.76	■■■□□ 2.03
UBTF-208	ENST00000529373	TBC1D9B	Q66K14	1250 aa		27.75	■■■□□ 2.03
UBTF-208	ENST00000529373	BICDL1	Q6ZP65	573 aa		27.75	■■■□□ 2.03
UBTF-208	ENST00000529373	PIP4K2A	P48426	406 aa	Predicted RBP	27.74	■■■□□ 2.03
UBTF-208	ENST00000529373	COL11A2	P13942	1736 aa	Predicted RBP	27.74	■■■□□ 2.03
UBTF-208	ENST00000529373	SBF1	O95248	1867 aa		27.73	■■■□□ 2.03
UBTF-208	ENST00000529373	SENP3-EIF4A1	A0A087X0R7	540 aa		27.73	■■■□□ 2.03
UBTF-208	ENST00000529373	CAMTA2	O94983	1202 aa		27.73	■■■□□ 2.03
UBTF-208	ENST00000529373	SNRPA1	P09661	255 aa	Known RBP	27.72	■■■□□ 2.03
UBTF-208	ENST00000529373	TAF7	Q15545	349 aa	Predicted RBP	27.7	■■■□□ 2.02
UBTF-208	ENST00000529373	NFE2L2	Q16236	605 aa		27.69	■■■□□ 2.02
UBTF-208	ENST00000529373	MIS18A	Q9NYP9	233 aa		27.69	■■■□□ 2.02
UBTF-208	ENST00000529373	RALBP1	Q15311	655 aa		27.68	■■■□□ 2.02
UBTF-208	ENST00000529373	DZIP3	Q86Y13	1208 aa	Known RBP	27.68	■■■□□ 2.02
UBTF-208	ENST00000529373	NBPF26	B4DH59	902 aa		27.67	■■■□□ 2.02
UBTF-208	ENST00000529373	NEFM	P07197	916 aa		27.67	■■■□□ 2.02
UBTF-208	ENST00000529373	DDX10	Q13206	875 aa	Known RBP	27.67	■■■□□ 2.02
UBTF-208	ENST00000529373	PRR5L	Q6MZQ0	368 aa		27.67	■■■□□ 2.02
UBTF-208	ENST00000529373	NBPF10	Q6P3W6	841 aa	Known RBP	27.67	■■■□□ 2.02
UBTF-208	ENST00000529373	NBPF15	Q8N660	670 aa		27.67	■■■□□ 2.02
UBTF-208	ENST00000529373	THUMPD2	Q9BTF0	503 aa	Known RBP	27.67	■■■□□ 2.02
UBTF-208	ENST00000529373	KIF3C	O14782	793 aa		27.66	■■■□□ 2.02
UBTF-208	ENST00000529373	C9orf131	Q5VYM1	1079 aa		27.66	■■■□□ 2.02
UBTF-208	ENST00000529373	C2CD5	Q86YS7	1000 aa		27.66	■■■□□ 2.02
UBTF-208	ENST00000529373	NPM2	Q86SE8	214 aa	Known RBP	27.64	■■■□□ 2.02
UBTF-208	ENST00000529373	CCDC24	Q8N4L8	307 aa		27.64	■■■□□ 2.02
UBTF-208	ENST00000529373	MAPK8IP3	Q9UPT6	1336 aa		27.64	■■■□□ 2.01
UBTF-208	ENST00000529373	SETDB2	Q96T68	719 aa		27.62	■■■□□ 2.01
UBTF-208	ENST00000529373		H0YIN7	160 aa		27.61	■■■□□ 2.01
UBTF-208	ENST00000529373	RASSF7	Q02833	373 aa		27.61	■■■□□ 2.01
UBTF-208	ENST00000529373	TTLL6	Q8N841	843 aa		27.61	■■■□□ 2.01
UBTF-208	ENST00000529373	BRIP1	Q9BX63	1249 aa		27.61	■■■□□ 2.01
UBTF-208	ENST00000529373	CACNA1S	Q13698	1873 aa		27.61	■■■□□ 2.01
UBTF-208	ENST00000529373	CNBD1	Q8NA66	436 aa		27.6	■■■□□ 2.01
UBTF-208	ENST00000529373	PNISR	Q8TF01	805 aa	Known RBP	27.6	■■■□□ 2.01
UBTF-208	ENST00000529373	PNN	Q9H307	717 aa	Known RBP	27.6	■■■□□ 2.01
UBTF-208	ENST00000529373	RNF181	Q9P0P0	153 aa		27.6	■■■□□ 2.01
UBTF-208	ENST00000529373	MYBBP1A	Q9BQG0	1328 aa	Known RBP	27.6	■■■□□ 2.01
UBTF-208	ENST00000529373	CCDC88A	Q3V6T2	1871 aa		27.59	■■■□□ 2.01
UBTF-208	ENST00000529373	ARFGEF2	Q9Y6D5	1785 aa		27.59	■■■□□ 2.01
UBTF-208	ENST00000529373	EIF4A1	P60842	406 aa	Known RBP	27.59	■■■□□ 2.01
UBTF-208	ENST00000529373	TIAM2	Q8IVF5	1701 aa		27.58	■■■□□ 2.01
UBTF-208	ENST00000529373	PRELP	P51888	382 aa		27.58	■■■□□ 2.01
UBTF-208	ENST00000529373	CLEC4G	Q6UXB4	293 aa		27.58	■■■□□ 2.01
UBTF-208	ENST00000529373	NMRK2	Q9NPI5	230 aa		27.58	■■■□□ 2.01
UBTF-208	ENST00000529373	PDE6B	P35913	854 aa		27.57	■■■□□ 2
UBTF-208	ENST00000529373	FER1L6	Q2WGJ9	1857 aa		27.57	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms