RNA–Protein interactions for RNA: ENST00000528932.1

TRIM3-207, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-207ENST00000528932 TM4SF1P30408 202 aa17.03■□□□□ 0.32
TRIM3-207ENST00000528932 CC2D1BQ5T0F9 858 aaKnown RBP17.03■□□□□ 0.32
TRIM3-207ENST00000528932 MRC1P22897 1456 aa17.03■□□□□ 0.32
TRIM3-207ENST00000528932 APLP1P51693 650 aa17.02■□□□□ 0.32
TRIM3-207ENST00000528932 MTHFSDQ2M296 383 aaKnown RBP17.02■□□□□ 0.32
TRIM3-207ENST00000528932 ZBTB1Q9Y2K1 713 aa17.02■□□□□ 0.32
TRIM3-207ENST00000528932 C16orf71Q8IYS4 520 aaPredicted RBP17.01■□□□□ 0.31
TRIM3-207ENST00000528932 CCDC88AQ3V6T2 1871 aa17.01■□□□□ 0.31
TRIM3-207ENST00000528932 COL15A1P39059 1388 aa17.01■□□□□ 0.31
TRIM3-207ENST00000528932 HTRA3P83110 453 aa17■□□□□ 0.31
TRIM3-207ENST00000528932 RASSF7Q02833 373 aa17■□□□□ 0.31
TRIM3-207ENST00000528932 NFIXQ14938 502 aa17■□□□□ 0.31
TRIM3-207ENST00000528932 WDR90Q96KV7 1748 aa17■□□□□ 0.31
TRIM3-207ENST00000528932 DIAPH1O60610 1272 aaKnown RBP16.99■□□□□ 0.31
TRIM3-207ENST00000528932 CANXP27824 592 aaKnown RBP16.99■□□□□ 0.31
TRIM3-207ENST00000528932 BICDL1Q6ZP65 573 aa16.99■□□□□ 0.31
TRIM3-207ENST00000528932 RRAGCQ9HB90 399 aa16.99■□□□□ 0.31
TRIM3-207ENST00000528932 UBR2Q8IWV8 1755 aa16.99■□□□□ 0.31
TRIM3-207ENST00000528932 DLEC1Q9Y238 1755 aa16.98■□□□□ 0.31
TRIM3-207ENST00000528932 BCL2L12Q9HB09 334 aa16.98■□□□□ 0.31
TRIM3-207ENST00000528932 NARFQ9UHQ1 456 aa16.98■□□□□ 0.31
TRIM3-207ENST00000528932 NRXN2Q9P2S2 1712 aa16.98■□□□□ 0.31
TRIM3-207ENST00000528932 SERPINB2P05120 415 aa16.97■□□□□ 0.31
TRIM3-207ENST00000528932 RBM46Q8TBY0 533 aaKnown RBP16.97■□□□□ 0.31
TRIM3-207ENST00000528932 TNRC6CQ9HCJ0 1690 aaKnown RBP16.97■□□□□ 0.31
TRIM3-207ENST00000528932 KDM2BQ8NHM5 1336 aa16.96■□□□□ 0.31
TRIM3-207ENST00000528932 U2SURPO15042 1029 aaKnown RBP16.96■□□□□ 0.31
TRIM3-207ENST00000528932 DNAJC5GQ8N7S2 189 aa16.96■□□□□ 0.31
TRIM3-207ENST00000528932 ZNF330Q9Y3S2 320 aaPredicted RBP16.96■□□□□ 0.31
TRIM3-207ENST00000528932 CARMIL3Q8ND23 1372 aa16.96■□□□□ 0.31
TRIM3-207ENST00000528932 TTC5Q8N0Z6 440 aa16.95■□□□□ 0.3
TRIM3-207ENST00000528932 TIAM2Q8IVF5 1701 aa16.94■□□□□ 0.3
TRIM3-207ENST00000528932 PER1O15534 1290 aaPredicted RBP16.94■□□□□ 0.3
TRIM3-207ENST00000528932 C2CD5Q86YS7 1000 aa16.94■□□□□ 0.3
TRIM3-207ENST00000528932 CCDC24Q8N4L8 307 aa16.94■□□□□ 0.3
TRIM3-207ENST00000528932 ANKRD31Q8N7Z5 1873 aa16.94■□□□□ 0.3
TRIM3-207ENST00000528932 SIPA1L3O60292 1781 aaPredicted RBP16.93■□□□□ 0.3
TRIM3-207ENST00000528932 PRELPP51888 382 aa16.93■□□□□ 0.3
TRIM3-207ENST00000528932 VSIG10Q8N0Z9 540 aa16.93■□□□□ 0.3
TRIM3-207ENST00000528932 CACNA1SQ13698 1873 aa16.93■□□□□ 0.3
TRIM3-207ENST00000528932 COL3A1P02461 1466 aaPredicted RBP16.93■□□□□ 0.3
TRIM3-207ENST00000528932 TTLL6Q8N841 843 aa16.92■□□□□ 0.3
TRIM3-207ENST00000528932 ZNF496Q96IT1 587 aaPredicted RBP16.92■□□□□ 0.3
TRIM3-207ENST00000528932 ZNF219Q9P2Y4 722 aaPredicted RBP16.92■□□□□ 0.3
TRIM3-207ENST00000528932 STARD3NLO95772 234 aa16.91■□□□□ 0.3
TRIM3-207ENST00000528932 TEFQ10587 303 aa16.91■□□□□ 0.3
TRIM3-207ENST00000528932 TBC1D9BQ66K14 1250 aa16.91■□□□□ 0.3
TRIM3-207ENST00000528932 IL17REQ8NFR9 667 aa16.91■□□□□ 0.3
TRIM3-207ENST00000528932 TBC1D2BQ9UPU7 963 aa16.91■□□□□ 0.3
TRIM3-207ENST00000528932 SCN7AQ01118 1682 aa16.91■□□□□ 0.3
TRIM3-207ENST00000528932 COL11A2P13942 1736 aaPredicted RBP16.9■□□□□ 0.3
TRIM3-207ENST00000528932 GNAT3A8MTJ3 354 aa16.9■□□□□ 0.3
TRIM3-207ENST00000528932 H0YIN7 160 aa16.9■□□□□ 0.3
TRIM3-207ENST00000528932 LMNB1P20700 586 aa16.9■□□□□ 0.3
TRIM3-207ENST00000528932 EIF5P55010 431 aaKnown RBP16.9■□□□□ 0.3
TRIM3-207ENST00000528932 FSTL1Q12841 308 aa16.9■□□□□ 0.3
TRIM3-207ENST00000528932 ZNF622Q969S3 477 aaKnown RBP eCLIP16.9■□□□□ 0.3
TRIM3-207ENST00000528932 HEG1Q9ULI3 1381 aa16.89■□□□□ 0.3
TRIM3-207ENST00000528932 A0A087WZG4 1122 aa16.89■□□□□ 0.29
TRIM3-207ENST00000528932 ZNF790Q6PG37 636 aa16.89■□□□□ 0.29
TRIM3-207ENST00000528932 KCNQ3O43525 872 aa16.88■□□□□ 0.29
TRIM3-207ENST00000528932 GAS2L2Q8NHY3 880 aa16.88■□□□□ 0.29
TRIM3-207ENST00000528932 KLRG1Q96E93 195 aa16.88■□□□□ 0.29
TRIM3-207ENST00000528932 NFKBIEO00221 500 aa16.87■□□□□ 0.29
TRIM3-207ENST00000528932 A1BGP04217 495 aa16.87■□□□□ 0.29
TRIM3-207ENST00000528932 PIP4K2AP48426 406 aaPredicted RBP16.87■□□□□ 0.29
TRIM3-207ENST00000528932 SMC1BQ8NDV3 1235 aa16.87■□□□□ 0.29
TRIM3-207ENST00000528932 GLTPD2A6NH11 291 aa16.86■□□□□ 0.29
TRIM3-207ENST00000528932 NPHP1O15259 732 aa16.86■□□□□ 0.29
TRIM3-207ENST00000528932 C21orf2O43822 256 aa16.86■□□□□ 0.29
TRIM3-207ENST00000528932 PRR5LQ6MZQ0 368 aa16.86■□□□□ 0.29
TRIM3-207ENST00000528932 PHACTR3Q96KR7 559 aa16.86■□□□□ 0.29
TRIM3-207ENST00000528932 FER1L6Q2WGJ9 1857 aa16.86■□□□□ 0.29
TRIM3-207ENST00000528932 DICER1Q9UPY3 1922 aaKnown RBP16.86■□□□□ 0.29
TRIM3-207ENST00000528932 BCORQ6W2J9 1755 aa16.85■□□□□ 0.29
TRIM3-207ENST00000528932 PRKAR2BP31323 418 aa16.85■□□□□ 0.29
TRIM3-207ENST00000528932 FMNL2Q96PY5 1086 aa16.85■□□□□ 0.29
TRIM3-207ENST00000528932 SLX4Q8IY92 1834 aa16.84■□□□□ 0.29
TRIM3-207ENST00000528932 BTBD11A6QL63 1104 aa16.84■□□□□ 0.29
TRIM3-207ENST00000528932 VEGFAP15692 232 aaPredicted RBP16.84■□□□□ 0.29
TRIM3-207ENST00000528932 PDE6BP35913 854 aa16.84■□□□□ 0.29
TRIM3-207ENST00000528932 NPM2Q86SE8 214 aaKnown RBP16.84■□□□□ 0.29
TRIM3-207ENST00000528932 TEX13AQ9BXU3 409 aaPredicted RBP16.84■□□□□ 0.29
TRIM3-207ENST00000528932 ZC3H4Q9UPT8 1303 aaKnown RBP16.84■□□□□ 0.29
TRIM3-207ENST00000528932 PRAMEF22A3QJZ6 481 aa16.83■□□□□ 0.28
TRIM3-207ENST00000528932 CAMTA2O94983 1202 aa16.83■□□□□ 0.28
TRIM3-207ENST00000528932 IL6STP40189 918 aaPredicted RBP16.83■□□□□ 0.28
TRIM3-207ENST00000528932 BRIP1Q9BX63 1249 aa16.83■□□□□ 0.28
TRIM3-207ENST00000528932 NPC1L1Q9UHC9 1359 aa16.83■□□□□ 0.28
TRIM3-207ENST00000528932 DZIP3Q86Y13 1208 aaKnown RBP16.82■□□□□ 0.28
TRIM3-207ENST00000528932 CNBD1Q8NA66 436 aa16.82■□□□□ 0.28
TRIM3-207ENST00000528932 SETDB2Q96T68 719 aa16.82■□□□□ 0.28
TRIM3-207ENST00000528932 RSPH6AQ9H0K4 717 aa16.82■□□□□ 0.28
TRIM3-207ENST00000528932 USP16Q9Y5T5 823 aa16.82■□□□□ 0.28
TRIM3-207ENST00000528932 CEMIPQ8WUJ3 1361 aa16.81■□□□□ 0.28
TRIM3-207ENST00000528932 ERFEQ4G0M1 354 aa16.81■□□□□ 0.28
TRIM3-207ENST00000528932 COL13A1Q5TAT6 717 aaPredicted RBP16.81■□□□□ 0.28
TRIM3-207ENST00000528932 MCM10Q7L590 875 aa16.81■□□□□ 0.28
TRIM3-207ENST00000528932 JMYQ8N9B5 988 aa16.81■□□□□ 0.28
TRIM3-207ENST00000528932 POTECB2RU33 542 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms