RNA–Protein interactions for RNA: ENST00000528750.1

PPFIA1-211, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 5

Gene PPFIA1, Length 1,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-211ENST00000528750 NBPF4Q96M43 638 aa12.64□□□□□ -0.39
PPFIA1-211ENST00000528750 RTL1A6NKG5 1358 aa12.64□□□□□ -0.39
PPFIA1-211ENST00000528750 CGNL1Q0VF96 1302 aa12.63□□□□□ -0.39
PPFIA1-211ENST00000528750 NCAPD2Q15021 1401 aa12.63□□□□□ -0.39
PPFIA1-211ENST00000528750 FYB1O15117 783 aa12.63□□□□□ -0.39
PPFIA1-211ENST00000528750 YBX3P16989 372 aaKnown RBP eCLIP12.63□□□□□ -0.39
PPFIA1-211ENST00000528750 PLPP6Q8IY26 295 aa12.62□□□□□ -0.39
PPFIA1-211ENST00000528750 COG3Q96JB2 828 aa12.62□□□□□ -0.39
PPFIA1-211ENST00000528750 WDR70Q9NW82 654 aa12.62□□□□□ -0.39
PPFIA1-211ENST00000528750 TFCP2L1Q9NZI6 479 aa12.62□□□□□ -0.39
PPFIA1-211ENST00000528750 KIF13BQ9NQT8 1826 aa12.62□□□□□ -0.39
PPFIA1-211ENST00000528750 C4BP0C0L5 1744 aa12.62□□□□□ -0.39
PPFIA1-211ENST00000528750 KIF24Q5T7B8 1368 aa12.61□□□□□ -0.39
PPFIA1-211ENST00000528750 POLD1P28340 1107 aa12.61□□□□□ -0.39
PPFIA1-211ENST00000528750 GPR162Q16538 588 aa12.61□□□□□ -0.39
PPFIA1-211ENST00000528750 LTV1Q96GA3 475 aaPredicted RBP12.61□□□□□ -0.39
PPFIA1-211ENST00000528750 INSRP06213 1382 aa12.6□□□□□ -0.39
PPFIA1-211ENST00000528750 CCNL1Q9UK58 526 aaPredicted RBP12.6□□□□□ -0.39
PPFIA1-211ENST00000528750 KIAA1551Q9HCM1 1747 aa12.59□□□□□ -0.39
PPFIA1-211ENST00000528750 RRS1Q15050 365 aaKnown RBP12.59□□□□□ -0.39
PPFIA1-211ENST00000528750 ADCY9O60503 1353 aa12.58□□□□□ -0.4
PPFIA1-211ENST00000528750 SENP3-EIF4A1A0A087X0R7 540 aa12.58□□□□□ -0.4
PPFIA1-211ENST00000528750 CYP27B1O15528 508 aa12.58□□□□□ -0.4
PPFIA1-211ENST00000528750 AMPHP49418 695 aa12.58□□□□□ -0.4
PPFIA1-211ENST00000528750 AMIGO3Q86WK7 504 aa12.58□□□□□ -0.4
PPFIA1-211ENST00000528750 SYTL4Q96C24 671 aaPredicted RBP12.58□□□□□ -0.4
PPFIA1-211ENST00000528750 ZNF831Q5JPB2 1677 aa12.57□□□□□ -0.4
PPFIA1-211ENST00000528750 BRCA1P38398 1863 aaKnown RBP12.57□□□□□ -0.4
PPFIA1-211ENST00000528750 NSD3Q9BZ95 1437 aa12.57□□□□□ -0.4
PPFIA1-211ENST00000528750 GRIN3BO60391 1043 aa12.57□□□□□ -0.4
PPFIA1-211ENST00000528750 HSP90AB2PQ58FF8 381 aa12.57□□□□□ -0.4
PPFIA1-211ENST00000528750 CARD14Q9BXL6 1004 aa12.57□□□□□ -0.4
PPFIA1-211ENST00000528750 GGNBP2Q9H3C7 697 aa12.57□□□□□ -0.4
PPFIA1-211ENST00000528750 CD2APQ9Y5K6 639 aa12.57□□□□□ -0.4
PPFIA1-211ENST00000528750 MYH14Q7Z406 1995 aaKnown RBP12.56□□□□□ -0.4
PPFIA1-211ENST00000528750 SNPHO15079 494 aa12.55□□□□□ -0.4
PPFIA1-211ENST00000528750 GIGYF1O75420 1035 aaPredicted RBP12.55□□□□□ -0.4
PPFIA1-211ENST00000528750 HOXB3P14651 431 aaPredicted RBP12.55□□□□□ -0.4
PPFIA1-211ENST00000528750 USHBP1Q8N6Y0 703 aa12.55□□□□□ -0.4
PPFIA1-211ENST00000528750 FLAD1Q8NFF5 587 aa12.55□□□□□ -0.4
PPFIA1-211ENST00000528750 KIF7Q2M1P5 1343 aa12.55□□□□□ -0.4
PPFIA1-211ENST00000528750 FLT4P35916 1363 aa12.55□□□□□ -0.4
PPFIA1-211ENST00000528750 PALLDQ8WX93 1383 aa12.55□□□□□ -0.4
PPFIA1-211ENST00000528750 CICQ96RK0 1608 aaPredicted RBP12.55□□□□□ -0.4
PPFIA1-211ENST00000528750 DOK7Q18PE1 504 aa12.54□□□□□ -0.4
PPFIA1-211ENST00000528750 PANK3Q9H999 370 aa12.54□□□□□ -0.4
PPFIA1-211ENST00000528750 PCDH11XQ9BZA7 1347 aa12.54□□□□□ -0.4
PPFIA1-211ENST00000528750 PCDH11YQ9BZA8 1340 aa12.54□□□□□ -0.4
PPFIA1-211ENST00000528750 COL5A3P25940 1745 aaPredicted RBP12.54□□□□□ -0.4
PPFIA1-211ENST00000528750 TATP17735 454 aaPredicted RBP12.53□□□□□ -0.4
PPFIA1-211ENST00000528750 HMGB2P26583 209 aaKnown RBP12.53□□□□□ -0.4
PPFIA1-211ENST00000528750 CAMK2BQ13554 666 aa12.53□□□□□ -0.4
PPFIA1-211ENST00000528750 RAPGEF4Q8WZA2 1011 aa12.53□□□□□ -0.4
PPFIA1-211ENST00000528750 ATP10DQ9P241 1426 aa12.53□□□□□ -0.4
PPFIA1-211ENST00000528750 N4BP2Q86UW6 1770 aaPredicted RBP12.52□□□□□ -0.41
PPFIA1-211ENST00000528750 E2F4Q16254 413 aa12.52□□□□□ -0.41
PPFIA1-211ENST00000528750 MSL1Q68DK7 614 aa12.52□□□□□ -0.41
PPFIA1-211ENST00000528750 PIGBQ92521 554 aa12.52□□□□□ -0.41
PPFIA1-211ENST00000528750 SMG6Q86US8 1419 aaKnown RBP12.52□□□□□ -0.41
PPFIA1-211ENST00000528750 SLC34A2O95436 690 aa12.51□□□□□ -0.41
PPFIA1-211ENST00000528750 IFFO2Q5TF58 517 aa12.5□□□□□ -0.41
PPFIA1-211ENST00000528750 MPRIPQ6WCQ1 1025 aa12.5□□□□□ -0.41
PPFIA1-211ENST00000528750 SMARCC1Q92922 1105 aaPredicted RBP12.5□□□□□ -0.41
PPFIA1-211ENST00000528750 EMILIN1Q9Y6C2 1016 aa12.5□□□□□ -0.41
PPFIA1-211ENST00000528750 WASHC2AQ641Q2 1341 aa12.5□□□□□ -0.41
PPFIA1-211ENST00000528750 PLEKHG2Q9H7P9 1386 aa12.5□□□□□ -0.41
PPFIA1-211ENST00000528750 ARFGEF1Q9Y6D6 1849 aa12.5□□□□□ -0.41
PPFIA1-211ENST00000528750 RIMBP2O15034 1052 aa12.49□□□□□ -0.41
PPFIA1-211ENST00000528750 SSFA2P28290 1259 aa12.49□□□□□ -0.41
PPFIA1-211ENST00000528750 SMIM5Q71RC9 77 aa12.49□□□□□ -0.41
PPFIA1-211ENST00000528750 SBF1O95248 1867 aa12.48□□□□□ -0.41
PPFIA1-211ENST00000528750 C4AP0C0L4 1744 aa12.48□□□□□ -0.41
PPFIA1-211ENST00000528750 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.48□□□□□ -0.41
PPFIA1-211ENST00000528750 TNNT2P45379 298 aaPredicted RBP12.48□□□□□ -0.41
PPFIA1-211ENST00000528750 LINC00116Q8NCU8 138 aa12.48□□□□□ -0.41
PPFIA1-211ENST00000528750 EYA1Q99502 592 aa12.48□□□□□ -0.41
PPFIA1-211ENST00000528750 EMILIN3Q9NT22 766 aa12.48□□□□□ -0.41
PPFIA1-211ENST00000528750 VIRMAQ69YN4 1812 aaKnown RBP12.48□□□□□ -0.41
PPFIA1-211ENST00000528750 KDRP35968 1356 aa12.47□□□□□ -0.41
PPFIA1-211ENST00000528750 LOC102724428A0A0B4J2F2 783 aa12.47□□□□□ -0.41
PPFIA1-211ENST00000528750 SIK1P57059 783 aa12.47□□□□□ -0.41
PPFIA1-211ENST00000528750 ITPK1Q13572 414 aa12.47□□□□□ -0.41
PPFIA1-211ENST00000528750 ZNF710Q8N1W2 664 aa12.47□□□□□ -0.41
PPFIA1-211ENST00000528750 KNSTRNQ9Y448 316 aa12.47□□□□□ -0.41
PPFIA1-211ENST00000528750 ADAMTS7Q9UKP4 1686 aa12.47□□□□□ -0.41
PPFIA1-211ENST00000528750 IGSF1Q8N6C5 1336 aa12.46□□□□□ -0.41
PPFIA1-211ENST00000528750 PPM1GO15355 546 aaPredicted RBP12.46□□□□□ -0.41
PPFIA1-211ENST00000528750 KCNV2Q8TDN2 545 aa12.46□□□□□ -0.41
PPFIA1-211ENST00000528750 OXER1Q8TDS5 423 aa12.46□□□□□ -0.41
PPFIA1-211ENST00000528750 PTCD2Q8WV60 388 aaKnown RBP12.46□□□□□ -0.41
PPFIA1-211ENST00000528750 SLC4A9Q96Q91 983 aa12.46□□□□□ -0.41
PPFIA1-211ENST00000528750 POLKQ9UBT6 870 aa12.46□□□□□ -0.41
PPFIA1-211ENST00000528750 ASAP1Q9ULH1 1129 aa12.46□□□□□ -0.41
PPFIA1-211ENST00000528750 PHKG2P15735 406 aa12.45□□□□□ -0.42
PPFIA1-211ENST00000528750 ZEB1P37275 1124 aaPredicted RBP12.45□□□□□ -0.42
PPFIA1-211ENST00000528750 ZSWIM6Q9HCJ5 1215 aa12.45□□□□□ -0.42
PPFIA1-211ENST00000528750 PXDNLA1KZ92 1463 aa12.45□□□□□ -0.42
PPFIA1-211ENST00000528750 SCN11AQ9UI33 1791 aa12.44□□□□□ -0.42
PPFIA1-211ENST00000528750 HSPA6P17066 643 aa12.44□□□□□ -0.42
PPFIA1-211ENST00000528750 CNGB1Q14028 1251 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms