RNA–Protein interactions for RNA: ENST00000528699.1

SIPA1-204, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-204ENST00000528699 PARP3Q9Y6F1 533 aa14.39□□□□□ -0.11
SIPA1-204ENST00000528699 USPL1Q5W0Q7 1092 aa14.38□□□□□ -0.11
SIPA1-204ENST00000528699 WWC3Q9ULE0 1092 aa14.38□□□□□ -0.11
SIPA1-204ENST00000528699 DLG5Q8TDM6 1919 aa14.38□□□□□ -0.11
SIPA1-204ENST00000528699 POLRMTO00411 1230 aaKnown RBP14.37□□□□□ -0.11
SIPA1-204ENST00000528699 TM4SF1P30408 202 aa14.37□□□□□ -0.11
SIPA1-204ENST00000528699 NARFQ9UHQ1 456 aa14.37□□□□□ -0.11
SIPA1-204ENST00000528699 ATP10DQ9P241 1426 aa14.37□□□□□ -0.11
SIPA1-204ENST00000528699 NRXN2Q9P2S2 1712 aa14.37□□□□□ -0.11
SIPA1-204ENST00000528699 SCN7AQ01118 1682 aa14.36□□□□□ -0.11
SIPA1-204ENST00000528699 A0A0G2JLW4 131 aa14.36□□□□□ -0.11
SIPA1-204ENST00000528699 ZPR1O75312 459 aa14.36□□□□□ -0.11
SIPA1-204ENST00000528699 DDX10Q13206 875 aaKnown RBP14.36□□□□□ -0.11
SIPA1-204ENST00000528699 STARD3NLO95772 234 aa14.35□□□□□ -0.11
SIPA1-204ENST00000528699 DPEP1P16444 411 aa14.35□□□□□ -0.11
SIPA1-204ENST00000528699 ZEB1P37275 1124 aaPredicted RBP14.35□□□□□ -0.11
SIPA1-204ENST00000528699 EIF5P55010 431 aaKnown RBP14.35□□□□□ -0.11
SIPA1-204ENST00000528699 FMNL2Q96PY5 1086 aa14.35□□□□□ -0.11
SIPA1-204ENST00000528699 TEX13AQ9BXU3 409 aaPredicted RBP14.35□□□□□ -0.11
SIPA1-204ENST00000528699 BCL2L12Q9HB09 334 aa14.35□□□□□ -0.11
SIPA1-204ENST00000528699 AFDNP55196 1824 aaKnown RBP14.34□□□□□ -0.11
SIPA1-204ENST00000528699 BTBD11A6QL63 1104 aa14.34□□□□□ -0.11
SIPA1-204ENST00000528699 KCNQ3O43525 872 aa14.34□□□□□ -0.11
SIPA1-204ENST00000528699 KCNA3P22001 575 aa14.34□□□□□ -0.11
SIPA1-204ENST00000528699 CANXP27824 592 aaKnown RBP14.34□□□□□ -0.11
SIPA1-204ENST00000528699 MCM10Q7L590 875 aa14.34□□□□□ -0.11
SIPA1-204ENST00000528699 ARFGEF1Q9Y6D6 1849 aa14.34□□□□□ -0.11
SIPA1-204ENST00000528699 HTATSF1O43719 755 aaKnown RBP14.33□□□□□ -0.12
SIPA1-204ENST00000528699 NFIXQ14938 502 aa14.33□□□□□ -0.12
SIPA1-204ENST00000528699 A0A087WZG4 1122 aa14.32□□□□□ -0.12
SIPA1-204ENST00000528699 IL6STP40189 918 aaPredicted RBP14.32□□□□□ -0.12
SIPA1-204ENST00000528699 RALBP1Q15311 655 aa14.32□□□□□ -0.12
SIPA1-204ENST00000528699 RTF1Q92541 710 aaKnown RBP14.32□□□□□ -0.12
SIPA1-204ENST00000528699 BCS1LQ9Y276 419 aa14.32□□□□□ -0.12
SIPA1-204ENST00000528699 BCORQ6W2J9 1755 aa14.32□□□□□ -0.12
SIPA1-204ENST00000528699 GIGYF1O75420 1035 aaPredicted RBP14.31□□□□□ -0.12
SIPA1-204ENST00000528699 C1QTNF8P60827 252 aa14.31□□□□□ -0.12
SIPA1-204ENST00000528699 DCTN1Q14203 1278 aa14.31□□□□□ -0.12
SIPA1-204ENST00000528699 PLEKHF1Q96S99 279 aa14.31□□□□□ -0.12
SIPA1-204ENST00000528699 DLEC1Q9Y238 1755 aa14.31□□□□□ -0.12
SIPA1-204ENST00000528699 KDM3BQ7LBC6 1761 aa14.3□□□□□ -0.12
SIPA1-204ENST00000528699 PRAMEF22A3QJZ6 481 aa14.29□□□□□ -0.12
SIPA1-204ENST00000528699 A1BGP04217 495 aa14.29□□□□□ -0.12
SIPA1-204ENST00000528699 CHRNA5P30532 468 aa14.29□□□□□ -0.12
SIPA1-204ENST00000528699 PIM2Q9P1W9 311 aa14.29□□□□□ -0.12
SIPA1-204ENST00000528699 CARMIL3Q8ND23 1372 aa14.29□□□□□ -0.12
SIPA1-204ENST00000528699 LAMB4A4D0S4 1761 aa14.29□□□□□ -0.12
SIPA1-204ENST00000528699 SERPINB2P05120 415 aa14.28□□□□□ -0.12
SIPA1-204ENST00000528699 SNRPA1P09661 255 aaKnown RBP14.28□□□□□ -0.12
SIPA1-204ENST00000528699 USP16Q9Y5T5 823 aa14.28□□□□□ -0.12
SIPA1-204ENST00000528699 MYBBP1AQ9BQG0 1328 aaKnown RBP14.27□□□□□ -0.12
SIPA1-204ENST00000528699 CAMTA2O94983 1202 aa14.27□□□□□ -0.13
SIPA1-204ENST00000528699 TAF7Q15545 349 aaPredicted RBP14.27□□□□□ -0.13
SIPA1-204ENST00000528699 NFE2L2Q16236 605 aa14.27□□□□□ -0.13
SIPA1-204ENST00000528699 DALRD3Q5D0E6 543 aaKnown RBP14.27□□□□□ -0.13
SIPA1-204ENST00000528699 GPBP1L1Q9HC44 474 aaPredicted RBP14.27□□□□□ -0.13
SIPA1-204ENST00000528699 TBC1D2BQ9UPU7 963 aa14.27□□□□□ -0.13
SIPA1-204ENST00000528699 ANKRD31Q8N7Z5 1873 aa14.27□□□□□ -0.13
SIPA1-204ENST00000528699 NEFMP07197 916 aa14.26□□□□□ -0.13
SIPA1-204ENST00000528699 TBC1D9BQ66K14 1250 aa14.26□□□□□ -0.13
SIPA1-204ENST00000528699 ZNF330Q9Y3S2 320 aaPredicted RBP14.26□□□□□ -0.13
SIPA1-204ENST00000528699 COL11A2P13942 1736 aaPredicted RBP14.25□□□□□ -0.13
SIPA1-204ENST00000528699 BICDL1Q6ZP65 573 aa14.25□□□□□ -0.13
SIPA1-204ENST00000528699 ARHGAP27Q6ZUM4 889 aa14.25□□□□□ -0.13
SIPA1-204ENST00000528699 PRKRIP1Q9H875 184 aaPredicted RBP14.25□□□□□ -0.13
SIPA1-204ENST00000528699 MAPK8IP3Q9UPT6 1336 aa14.24□□□□□ -0.13
SIPA1-204ENST00000528699 NBPF26B4DH59 902 aa14.24□□□□□ -0.13
SIPA1-204ENST00000528699 PIP4K2AP48426 406 aaPredicted RBP14.24□□□□□ -0.13
SIPA1-204ENST00000528699 PRR5LQ6MZQ0 368 aa14.24□□□□□ -0.13
SIPA1-204ENST00000528699 NBPF10Q6P3W6 841 aaKnown RBP14.24□□□□□ -0.13
SIPA1-204ENST00000528699 DZIP3Q86Y13 1208 aaKnown RBP14.24□□□□□ -0.13
SIPA1-204ENST00000528699 NBPF15Q8N660 670 aa14.24□□□□□ -0.13
SIPA1-204ENST00000528699 PNISRQ8TF01 805 aaKnown RBP14.24□□□□□ -0.13
SIPA1-204ENST00000528699 ZNF526Q8TF50 670 aaPredicted RBP14.24□□□□□ -0.13
SIPA1-204ENST00000528699 PNNQ9H307 717 aaKnown RBP14.24□□□□□ -0.13
SIPA1-204ENST00000528699 MIS18AQ9NYP9 233 aa14.24□□□□□ -0.13
SIPA1-204ENST00000528699 NPM2Q86SE8 214 aaKnown RBP14.23□□□□□ -0.13
SIPA1-204ENST00000528699 THUMPD2Q9BTF0 503 aaKnown RBP14.23□□□□□ -0.13
SIPA1-204ENST00000528699 RGL2O15211 777 aa14.22□□□□□ -0.13
SIPA1-204ENST00000528699 C2CD5Q86YS7 1000 aa14.22□□□□□ -0.13
SIPA1-204ENST00000528699 BRIP1Q9BX63 1249 aa14.22□□□□□ -0.13
SIPA1-204ENST00000528699 CEP350Q5VT06 3117 aa14.21□□□□□ -0.13
SIPA1-204ENST00000528699 SBF1O95248 1867 aa14.21□□□□□ -0.13
SIPA1-204ENST00000528699 SENP3-EIF4A1A0A087X0R7 540 aa14.21□□□□□ -0.13
SIPA1-204ENST00000528699 KIF3CO14782 793 aa14.21□□□□□ -0.13
SIPA1-204ENST00000528699 EIF4A1P60842 406 aaKnown RBP14.21□□□□□ -0.13
SIPA1-204ENST00000528699 C9orf131Q5VYM1 1079 aa14.21□□□□□ -0.13
SIPA1-204ENST00000528699 CLEC4GQ6UXB4 293 aa14.21□□□□□ -0.13
SIPA1-204ENST00000528699 H0YIN7 160 aa14.2□□□□□ -0.14
SIPA1-204ENST00000528699 TTLL6Q8N841 843 aa14.2□□□□□ -0.14
SIPA1-204ENST00000528699 CNBD1Q8NA66 436 aa14.2□□□□□ -0.14
SIPA1-204ENST00000528699 SETDB2Q96T68 719 aa14.2□□□□□ -0.14
SIPA1-204ENST00000528699 PDZRN3Q9UPQ7 1066 aa14.2□□□□□ -0.14
SIPA1-204ENST00000528699 PDE6BP35913 854 aa14.19□□□□□ -0.14
SIPA1-204ENST00000528699 CCDC24Q8N4L8 307 aa14.19□□□□□ -0.14
SIPA1-204ENST00000528699 ZNF652Q9Y2D9 606 aa14.19□□□□□ -0.14
SIPA1-204ENST00000528699 ARFGEF2Q9Y6D5 1785 aa14.19□□□□□ -0.14
SIPA1-204ENST00000528699 ZNF316A6NFI3 1004 aaPredicted RBP14.18□□□□□ -0.14
SIPA1-204ENST00000528699 RIPK4P57078 832 aa14.18□□□□□ -0.14
SIPA1-204ENST00000528699 TMPOP42166 694 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms