RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 ASXL1Q8IXJ9 1541 aa9.91□□□□□ -0.82
CTNND1-219ENST00000528621 PRKCSHP14314 528 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-219ENST00000528621 ANO10Q9NW15 660 aa9.91□□□□□ -0.82
CTNND1-219ENST00000528621 DBF4Q9UBU7 674 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-219ENST00000528621 PIK3R4Q99570 1358 aa9.91□□□□□ -0.82
CTNND1-219ENST00000528621 KIAA1328Q86T90 577 aa9.91□□□□□ -0.82
CTNND1-219ENST00000528621 DDX11Q96FC9 970 aa9.91□□□□□ -0.82
CTNND1-219ENST00000528621 KDM5BQ9UGL1 1544 aa9.9□□□□□ -0.82
CTNND1-219ENST00000528621 ANKRD18BA2A2Z9 1011 aa9.9□□□□□ -0.82
CTNND1-219ENST00000528621 SSRP1Q08945 709 aaKnown RBP9.9□□□□□ -0.82
CTNND1-219ENST00000528621 PAF1Q8N7H5 531 aa9.9□□□□□ -0.82
CTNND1-219ENST00000528621 ANKIB1Q9P2G1 1089 aa9.9□□□□□ -0.82
CTNND1-219ENST00000528621 A0A087WZG4 1122 aa9.9□□□□□ -0.82
CTNND1-219ENST00000528621 IFIT5Q13325 482 aaKnown RBP9.9□□□□□ -0.82
CTNND1-219ENST00000528621 NEFHP12036 1026 aa9.9□□□□□ -0.82
CTNND1-219ENST00000528621 MCM3P25205 808 aa9.9□□□□□ -0.82
CTNND1-219ENST00000528621 DZIP1Q86YF9 867 aaKnown RBP9.9□□□□□ -0.82
CTNND1-219ENST00000528621 ZSCAN12O43309 604 aa9.9□□□□□ -0.83
CTNND1-219ENST00000528621 EPB41L2O43491 1005 aaKnown RBP9.9□□□□□ -0.83
CTNND1-219ENST00000528621 EIF5P55010 431 aaKnown RBP9.9□□□□□ -0.83
CTNND1-219ENST00000528621 THUMPD2Q9BTF0 503 aaKnown RBP9.9□□□□□ -0.83
CTNND1-219ENST00000528621 MKNK2Q9HBH9 465 aa9.9□□□□□ -0.83
CTNND1-219ENST00000528621 ABCF2Q9UG63 623 aa9.9□□□□□ -0.83
CTNND1-219ENST00000528621 TTC21AQ8NDW8 1320 aa9.9□□□□□ -0.83
CTNND1-219ENST00000528621 CRACR2BQ8N4Y2 399 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-219ENST00000528621 TAF4BQ92750 862 aa9.89□□□□□ -0.83
CTNND1-219ENST00000528621 RAB34Q9BZG1 259 aa9.89□□□□□ -0.83
CTNND1-219ENST00000528621 GBP3Q9H0R5 595 aa9.89□□□□□ -0.83
CTNND1-219ENST00000528621 NAPBQ9H115 298 aa9.89□□□□□ -0.83
CTNND1-219ENST00000528621 KIF21AQ7Z4S6 1674 aa9.89□□□□□ -0.83
CTNND1-219ENST00000528621 KIF20AO95235 890 aa9.89□□□□□ -0.83
CTNND1-219ENST00000528621 GBP2P32456 591 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-219ENST00000528621 BOLA2Q9H3K6 86 aa9.89□□□□□ -0.83
CTNND1-219ENST00000528621 PDCL2Q8N4E4 241 aa9.89□□□□□ -0.83
CTNND1-219ENST00000528621 SSH1Q8WYL5 1049 aa9.89□□□□□ -0.83
CTNND1-219ENST00000528621 CAMK4Q16566 473 aa9.89□□□□□ -0.83
CTNND1-219ENST00000528621 RPGRQ92834 1020 aaKnown RBP9.89□□□□□ -0.83
CTNND1-219ENST00000528621 AMOTL2Q9Y2J4 779 aa9.89□□□□□ -0.83
CTNND1-219ENST00000528621 UQCRHLA0A096LP55 91 aa9.89□□□□□ -0.83
CTNND1-219ENST00000528621 UQCRHP07919 91 aa9.89□□□□□ -0.83
CTNND1-219ENST00000528621 HMG20BQ9P0W2 317 aa9.89□□□□□ -0.83
CTNND1-219ENST00000528621 LRRFIP2Q9Y608 721 aaKnown RBP9.89□□□□□ -0.83
CTNND1-219ENST00000528621 SLC12A7Q9Y666 1083 aa9.89□□□□□ -0.83
CTNND1-219ENST00000528621 ADGRF5Q8IZF2 1346 aa9.89□□□□□ -0.83
CTNND1-219ENST00000528621 GOLGA6L7A0A1B0GV03 622 aa9.88□□□□□ -0.83
CTNND1-219ENST00000528621 MINDY4BA8MYZ0 360 aa9.88□□□□□ -0.83
CTNND1-219ENST00000528621 FKBP15Q5T1M5 1219 aa9.88□□□□□ -0.83
CTNND1-219ENST00000528621 FAM177A1Q8N128 213 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-219ENST00000528621 CUL5Q93034 780 aa9.88□□□□□ -0.83
CTNND1-219ENST00000528621 EMILIN1Q9Y6C2 1016 aa9.88□□□□□ -0.83
CTNND1-219ENST00000528621 ENOX2Q16206 610 aaKnown RBP9.88□□□□□ -0.83
CTNND1-219ENST00000528621 PPP4R3AQ6IN85 833 aa9.88□□□□□ -0.83
CTNND1-219ENST00000528621 TSPYL1Q9H0U9 437 aa9.88□□□□□ -0.83
CTNND1-219ENST00000528621 ZNF213O14771 459 aa9.88□□□□□ -0.83
CTNND1-219ENST00000528621 NEMFO60524 1076 aa9.88□□□□□ -0.83
CTNND1-219ENST00000528621 TMEM266Q2M3C6 531 aa9.88□□□□□ -0.83
CTNND1-219ENST00000528621 ARHGAP45Q92619 1136 aa9.88□□□□□ -0.83
CTNND1-219ENST00000528621 TRMT112Q9UI30 125 aaKnown RBP9.88□□□□□ -0.83
CTNND1-219ENST00000528621 CFAP43Q8NDM7 1665 aa9.88□□□□□ -0.83
CTNND1-219ENST00000528621 MPRIPQ6WCQ1 1025 aa9.88□□□□□ -0.83
CTNND1-219ENST00000528621 CCDC12Q8WUD4 166 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-219ENST00000528621 LIMCH1Q9UPQ0 1083 aa9.88□□□□□ -0.83
CTNND1-219ENST00000528621 KIAA0754O94854 1291 aa9.87□□□□□ -0.83
CTNND1-219ENST00000528621 CTCFLQ8NI51 663 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-219ENST00000528621 SYCE3A1L190 88 aa9.87□□□□□ -0.83
CTNND1-219ENST00000528621 RBM10P98175 930 aaKnown RBP9.87□□□□□ -0.83
CTNND1-219ENST00000528621 ZNF444Q8N0Y2 327 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-219ENST00000528621 MAP3K2Q9Y2U5 619 aa9.87□□□□□ -0.83
CTNND1-219ENST00000528621 PTCD1O75127 700 aaKnown RBP9.87□□□□□ -0.83
CTNND1-219ENST00000528621 NEBLO76041 1014 aa9.87□□□□□ -0.83
CTNND1-219ENST00000528621 CASQ1P31415 396 aa9.87□□□□□ -0.83
CTNND1-219ENST00000528621 CETN2P41208 172 aa9.87□□□□□ -0.83
CTNND1-219ENST00000528621 CCDC178Q5BJE1 867 aa9.87□□□□□ -0.83
CTNND1-219ENST00000528621 IQCA1Q86XH1 822 aa9.87□□□□□ -0.83
CTNND1-219ENST00000528621 C8orf76Q96K31 380 aa9.87□□□□□ -0.83
CTNND1-219ENST00000528621 GPATCH8Q9UKJ3 1502 aaKnown RBP9.87□□□□□ -0.83
CTNND1-219ENST00000528621 ANKRD62A6NC57 917 aa9.87□□□□□ -0.83
CTNND1-219ENST00000528621 GOLGA8AA7E2F4 631 aa9.87□□□□□ -0.83
CTNND1-219ENST00000528621 GOLGA8BA8MQT2 603 aa9.87□□□□□ -0.83
CTNND1-219ENST00000528621 CFAP100Q494V2 611 aa9.87□□□□□ -0.83
CTNND1-219ENST00000528621 PLCH2O75038 1416 aa9.87□□□□□ -0.83
CTNND1-219ENST00000528621 SPA17Q15506 151 aa9.86□□□□□ -0.83
CTNND1-219ENST00000528621 SPTY2D1Q68D10 685 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-219ENST00000528621 IFNL2Q8IZJ0 200 aa9.86□□□□□ -0.83
CTNND1-219ENST00000528621 CCDC8Q9H0W5 538 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-219ENST00000528621 DISP3Q9P2K9 1392 aa9.86□□□□□ -0.83
CTNND1-219ENST00000528621 DDX19AQ9NUU7 478 aaKnown RBP9.86□□□□□ -0.83
CTNND1-219ENST00000528621 DMRT2Q9Y5R5 561 aa9.86□□□□□ -0.83
CTNND1-219ENST00000528621 TNRQ92752 1358 aa9.86□□□□□ -0.83
CTNND1-219ENST00000528621 LRRC27Q9C0I9 530 aa9.86□□□□□ -0.83
CTNND1-219ENST00000528621 FAM193AP78312 1265 aa9.86□□□□□ -0.83
CTNND1-219ENST00000528621 CCDC96Q2M329 555 aa9.86□□□□□ -0.83
CTNND1-219ENST00000528621 PPP4R3BQ5MIZ7 849 aa9.86□□□□□ -0.83
CTNND1-219ENST00000528621 CATIPQ7Z7H3 387 aa9.86□□□□□ -0.83
CTNND1-219ENST00000528621 PUS7Q96PZ0 661 aaKnown RBP9.86□□□□□ -0.83
CTNND1-219ENST00000528621 CWC25Q9NXE8 425 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-219ENST00000528621 TCOF1Q13428 1488 aaKnown RBP9.85□□□□□ -0.83
CTNND1-219ENST00000528621 F6X3S4 739 aa9.85□□□□□ -0.83
CTNND1-219ENST00000528621 BAG4O95429 457 aaKnown RBP9.85□□□□□ -0.83
CTNND1-219ENST00000528621 GSTO1P78417 241 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms