RNA–Protein interactions for RNA: ENST00000528461.5

SEC16B-208, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

TSL 1 (best)

Gene SEC16B, Length 3,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-208ENST00000528461 IBTKQ9P2D0 1353 aaPredicted RBP16.82■□□□□ 0.28
SEC16B-208ENST00000528461 SSH3Q8TE77 659 aa16.82■□□□□ 0.28
SEC16B-208ENST00000528461 ZNF496Q96IT1 587 aaPredicted RBP16.82■□□□□ 0.28
SEC16B-208ENST00000528461 POLA2Q14181 598 aa16.81■□□□□ 0.28
SEC16B-208ENST00000528461 UPF2Q9HAU5 1272 aaKnown RBP16.81■□□□□ 0.28
SEC16B-208ENST00000528461 EXOC6BQ9Y2D4 811 aa16.81■□□□□ 0.28
SEC16B-208ENST00000528461 RBM25P49756 843 aaKnown RBP16.81■□□□□ 0.28
SEC16B-208ENST00000528461 DDX21Q9NR30 783 aaKnown RBP eCLIP16.81■□□□□ 0.28
SEC16B-208ENST00000528461 PAPPAQ13219 1627 aa16.81■□□□□ 0.28
SEC16B-208ENST00000528461 OSBPL3Q9H4L5 887 aa16.81■□□□□ 0.28
SEC16B-208ENST00000528461 UBTFL1P0CB47 393 aaPredicted RBP16.8■□□□□ 0.28
SEC16B-208ENST00000528461 KSR2Q6VAB6 950 aa16.8■□□□□ 0.28
SEC16B-208ENST00000528461 APBB1O00213 710 aa16.8■□□□□ 0.28
SEC16B-208ENST00000528461 CARD10Q9BWT7 1032 aa16.8■□□□□ 0.28
SEC16B-208ENST00000528461 MAP3K2Q9Y2U5 619 aa16.8■□□□□ 0.28
SEC16B-208ENST00000528461 HYPKQ9NX55 129 aa16.8■□□□□ 0.28
SEC16B-208ENST00000528461 LAMB4A4D0S4 1761 aa16.79■□□□□ 0.28
SEC16B-208ENST00000528461 ROBO1Q9Y6N7 1651 aa16.79■□□□□ 0.28
SEC16B-208ENST00000528461 TOGARAM1Q9Y4F4 1720 aa16.79■□□□□ 0.28
SEC16B-208ENST00000528461 LARP1Q6PKG0 1096 aaKnown RBP16.79■□□□□ 0.28
SEC16B-208ENST00000528461 KIF2CQ99661 725 aa16.79■□□□□ 0.28
SEC16B-208ENST00000528461 NKX1-1Q15270 411 aaPredicted RBP16.78■□□□□ 0.28
SEC16B-208ENST00000528461 TOM1L2Q6ZVM7 507 aa16.78■□□□□ 0.28
SEC16B-208ENST00000528461 TBC1D2Q9BYX2 928 aa16.78■□□□□ 0.28
SEC16B-208ENST00000528461 USP16Q9Y5T5 823 aa16.78■□□□□ 0.28
SEC16B-208ENST00000528461 LTBP4Q8N2S1 1624 aa16.78■□□□□ 0.28
SEC16B-208ENST00000528461 PPP1R42Q7Z4L9 355 aa16.78■□□□□ 0.28
SEC16B-208ENST00000528461 COL22A1Q8NFW1 1626 aaPredicted RBP16.77■□□□□ 0.28
SEC16B-208ENST00000528461 HSP90AB1P08238 724 aaKnown RBP16.77■□□□□ 0.28
SEC16B-208ENST00000528461 ZCRB1Q8TBF4 217 aaKnown RBP16.77■□□□□ 0.28
SEC16B-208ENST00000528461 SDSP20132 328 aa16.77■□□□□ 0.27
SEC16B-208ENST00000528461 PDE1AP54750 535 aa16.77■□□□□ 0.27
SEC16B-208ENST00000528461 AHDC1Q5TGY3 1603 aaPredicted RBP16.77■□□□□ 0.27
SEC16B-208ENST00000528461 UTYO14607 1347 aa16.76■□□□□ 0.27
SEC16B-208ENST00000528461 CDC45O75419 566 aa16.76■□□□□ 0.27
SEC16B-208ENST00000528461 NBR1Q14596 966 aa16.76■□□□□ 0.27
SEC16B-208ENST00000528461 COL16A1Q07092 1604 aaPredicted RBP16.76■□□□□ 0.27
SEC16B-208ENST00000528461 KCPQ6ZWJ8 1503 aa16.76■□□□□ 0.27
SEC16B-208ENST00000528461 PCDH11XQ9BZA7 1347 aa16.76■□□□□ 0.27
SEC16B-208ENST00000528461 PCDH11YQ9BZA8 1340 aa16.76■□□□□ 0.27
SEC16B-208ENST00000528461 ALDH1L1O75891 902 aa16.76■□□□□ 0.27
SEC16B-208ENST00000528461 CWF19L2Q2TBE0 894 aaKnown RBP16.76■□□□□ 0.27
SEC16B-208ENST00000528461 LRRCC1Q9C099 1032 aa16.76■□□□□ 0.27
SEC16B-208ENST00000528461 MTX1Q13505 466 aa16.75■□□□□ 0.27
SEC16B-208ENST00000528461 KAZALD1Q96I82 304 aa16.75■□□□□ 0.27
SEC16B-208ENST00000528461 IGKV5-2P06315 115 aa16.75■□□□□ 0.27
SEC16B-208ENST00000528461 SNRPA1P09661 255 aaKnown RBP16.74■□□□□ 0.27
SEC16B-208ENST00000528461 IL2RBP14784 551 aa16.74■□□□□ 0.27
SEC16B-208ENST00000528461 CABP4P57796 275 aa16.74■□□□□ 0.27
SEC16B-208ENST00000528461 ANTXR1Q9H6X2 564 aa16.74■□□□□ 0.27
SEC16B-208ENST00000528461 ARFGEF2Q9Y6D5 1785 aa16.74■□□□□ 0.27
SEC16B-208ENST00000528461 LINS1Q8NG48 757 aa16.73■□□□□ 0.27
SEC16B-208ENST00000528461 STAP2Q9UGK3 403 aa16.73■□□□□ 0.27
SEC16B-208ENST00000528461 FMNL2Q96PY5 1086 aa16.73■□□□□ 0.27
SEC16B-208ENST00000528461 COL14A1Q05707 1796 aaKnown RBP16.73■□□□□ 0.27
SEC16B-208ENST00000528461 ERVV-2B6SEH9 535 aa16.72■□□□□ 0.27
SEC16B-208ENST00000528461 TNS2Q63HR2 1409 aa16.72■□□□□ 0.27
SEC16B-208ENST00000528461 STRN4Q9NRL3 753 aa16.72■□□□□ 0.27
SEC16B-208ENST00000528461 AIMP1Q12904 312 aaKnown RBP16.72■□□□□ 0.27
SEC16B-208ENST00000528461 TSHZ3Q63HK5 1081 aa16.72■□□□□ 0.27
SEC16B-208ENST00000528461 XAGE3Q8WTP9 111 aa16.72■□□□□ 0.27
SEC16B-208ENST00000528461 SRGAP3O43295 1099 aa16.71■□□□□ 0.27
SEC16B-208ENST00000528461 MYL6BP14649 208 aa16.71■□□□□ 0.27
SEC16B-208ENST00000528461 BECN1Q14457 450 aa16.71■□□□□ 0.27
SEC16B-208ENST00000528461 COPS6Q7L5N1 327 aa16.71■□□□□ 0.27
SEC16B-208ENST00000528461 DAXXQ9UER7 740 aaPredicted RBP16.71■□□□□ 0.27
SEC16B-208ENST00000528461 DISP2A7MBM2 1401 aa16.71■□□□□ 0.27
SEC16B-208ENST00000528461 PIP4K2AP48426 406 aaPredicted RBP16.71■□□□□ 0.27
SEC16B-208ENST00000528461 TTC5Q8N0Z6 440 aa16.71■□□□□ 0.26
SEC16B-208ENST00000528461 NUP188Q5SRE5 1749 aa16.7■□□□□ 0.26
SEC16B-208ENST00000528461 NBPF26B4DH59 902 aa16.7■□□□□ 0.26
SEC16B-208ENST00000528461 RAB11FIP3O75154 756 aa16.7■□□□□ 0.26
SEC16B-208ENST00000528461 MX1P20591 662 aa16.7■□□□□ 0.26
SEC16B-208ENST00000528461 NBPF14Q5TI25 921 aa16.7■□□□□ 0.26
SEC16B-208ENST00000528461 NBPF10Q6P3W6 841 aaKnown RBP16.7■□□□□ 0.26
SEC16B-208ENST00000528461 NBPF15Q8N660 670 aa16.7■□□□□ 0.26
SEC16B-208ENST00000528461 GRM8O00222 908 aa16.69■□□□□ 0.26
SEC16B-208ENST00000528461 SUCLG2Q96I99 432 aa16.69■□□□□ 0.26
SEC16B-208ENST00000528461 PLCH1Q4KWH8 1693 aa16.69■□□□□ 0.26
SEC16B-208ENST00000528461 DDX58O95786 925 aaKnown RBP16.69■□□□□ 0.26
SEC16B-208ENST00000528461 RHPN1Q8TCX5 695 aa16.69■□□□□ 0.26
SEC16B-208ENST00000528461 METTL22Q9BUU2 404 aaPredicted RBP16.69■□□□□ 0.26
SEC16B-208ENST00000528461 BTG4Q9NY30 223 aa16.69■□□□□ 0.26
SEC16B-208ENST00000528461 AFDNP55196 1824 aaKnown RBP16.69■□□□□ 0.26
SEC16B-208ENST00000528461 NEURL1BA8MQ27 555 aa16.69■□□□□ 0.26
SEC16B-208ENST00000528461 SURF6O75683 361 aaKnown RBP16.69■□□□□ 0.26
SEC16B-208ENST00000528461 USP26Q9BXU7 913 aa16.69■□□□□ 0.26
SEC16B-208ENST00000528461 ITGB4P16144 1822 aa16.68■□□□□ 0.26
SEC16B-208ENST00000528461 WNK3Q9BYP7 1800 aa16.68■□□□□ 0.26
SEC16B-208ENST00000528461 EVA1CP58658 441 aa16.68■□□□□ 0.26
SEC16B-208ENST00000528461 IL1RAPL2Q9NP60 686 aa16.68■□□□□ 0.26
SEC16B-208ENST00000528461 SNX21Q969T3 373 aa16.68■□□□□ 0.26
SEC16B-208ENST00000528461 C9orf78Q9NZ63 289 aaPredicted RBP16.68■□□□□ 0.26
SEC16B-208ENST00000528461 DDX54Q8TDD1 881 aaKnown RBP16.67■□□□□ 0.26
SEC16B-208ENST00000528461 GCKRQ14397 625 aa16.67■□□□□ 0.26
SEC16B-208ENST00000528461 NFKBIBQ15653 356 aa16.67■□□□□ 0.26
SEC16B-208ENST00000528461 ANKRD13DQ6ZTN6 518 aa16.67■□□□□ 0.26
SEC16B-208ENST00000528461 RIC3Q7Z5B4 369 aa16.67■□□□□ 0.26
SEC16B-208ENST00000528461 UNC5CLQ8IV45 518 aa16.67■□□□□ 0.26
SEC16B-208ENST00000528461 AOX1Q06278 1338 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms