RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 PCDH11YQ9BZA8 1340 aa9.67□□□□□ -0.86
SOX6-211ENST00000528429 ABCA3Q99758 1704 aa9.67□□□□□ -0.86
SOX6-211ENST00000528429 ZBTB22O15209 634 aa9.67□□□□□ -0.86
SOX6-211ENST00000528429 GIGYF1O75420 1035 aaPredicted RBP9.67□□□□□ -0.86
SOX6-211ENST00000528429 TTC5Q8N0Z6 440 aa9.67□□□□□ -0.86
SOX6-211ENST00000528429 MEIS3Q99687 375 aa9.67□□□□□ -0.86
SOX6-211ENST00000528429 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.67□□□□□ -0.86
SOX6-211ENST00000528429 PDE4AP27815 886 aa9.66□□□□□ -0.86
SOX6-211ENST00000528429 HDAC1Q13547 482 aaPredicted RBP9.66□□□□□ -0.86
SOX6-211ENST00000528429 HOXB7P09629 217 aa9.66□□□□□ -0.86
SOX6-211ENST00000528429 AHDC1Q5TGY3 1603 aaPredicted RBP9.66□□□□□ -0.86
SOX6-211ENST00000528429 ZNF496Q96IT1 587 aaPredicted RBP9.65□□□□□ -0.86
SOX6-211ENST00000528429 NCLP19338 710 aaKnown RBP9.65□□□□□ -0.87
SOX6-211ENST00000528429 CCT4P50991 539 aaKnown RBP9.65□□□□□ -0.87
SOX6-211ENST00000528429 PROSER3Q2NL68 480 aa9.65□□□□□ -0.87
SOX6-211ENST00000528429 TEX2Q8IWB9 1127 aa9.65□□□□□ -0.87
SOX6-211ENST00000528429 DBF4Q9UBU7 674 aaPredicted RBP9.65□□□□□ -0.87
SOX6-211ENST00000528429 PI4KAP2A4QPH2 592 aa9.64□□□□□ -0.87
SOX6-211ENST00000528429 GTF2E1P29083 439 aaPredicted RBP9.64□□□□□ -0.87
SOX6-211ENST00000528429 AIMP1Q12904 312 aaKnown RBP9.64□□□□□ -0.87
SOX6-211ENST00000528429 SIRT2Q8IXJ6 389 aa9.64□□□□□ -0.87
SOX6-211ENST00000528429 PI4KAP1Q8N8J0 262 aa9.64□□□□□ -0.87
SOX6-211ENST00000528429 MYL6BP14649 208 aa9.63□□□□□ -0.87
SOX6-211ENST00000528429 PIP4K2AP48426 406 aaPredicted RBP9.63□□□□□ -0.87
SOX6-211ENST00000528429 LNPKQ9C0E8 428 aa9.63□□□□□ -0.87
SOX6-211ENST00000528429 PHLPP1O60346 1717 aa9.63□□□□□ -0.87
SOX6-211ENST00000528429 PTCD1O75127 700 aaKnown RBP9.63□□□□□ -0.87
SOX6-211ENST00000528429 SMC5Q8IY18 1101 aa9.63□□□□□ -0.87
SOX6-211ENST00000528429 BACH2Q9BYV9 841 aa9.63□□□□□ -0.87
SOX6-211ENST00000528429 KDM3BQ7LBC6 1761 aa9.63□□□□□ -0.87
SOX6-211ENST00000528429 A0A0G2JS52 829 aa9.62□□□□□ -0.87
SOX6-211ENST00000528429 ANKRD45Q5TZF3 282 aa9.62□□□□□ -0.87
SOX6-211ENST00000528429 FMNL2Q96PY5 1086 aa9.62□□□□□ -0.87
SOX6-211ENST00000528429 APBB1O00213 710 aa9.62□□□□□ -0.87
SOX6-211ENST00000528429 PLEKHG2Q9H7P9 1386 aa9.62□□□□□ -0.87
SOX6-211ENST00000528429 SNRPA1P09661 255 aaKnown RBP9.61□□□□□ -0.87
SOX6-211ENST00000528429 CHRM1P11229 460 aaPredicted RBP9.61□□□□□ -0.87
SOX6-211ENST00000528429 TICAM2Q86XR7 235 aa9.61□□□□□ -0.87
SOX6-211ENST00000528429 DNAAF4Q8WXU2 420 aa9.61□□□□□ -0.87
SOX6-211ENST00000528429 USP16Q9Y5T5 823 aa9.61□□□□□ -0.87
SOX6-211ENST00000528429 HEG1Q9ULI3 1381 aa9.61□□□□□ -0.87
SOX6-211ENST00000528429 COL16A1Q07092 1604 aaPredicted RBP9.61□□□□□ -0.87
SOX6-211ENST00000528429 PKD1L3Q7Z443 1732 aa9.61□□□□□ -0.87
SOX6-211ENST00000528429 FAM161AQ3B820 660 aa9.61□□□□□ -0.87
SOX6-211ENST00000528429 CEP85Q6P2H3 762 aa9.61□□□□□ -0.87
SOX6-211ENST00000528429 SYTL4Q96C24 671 aaPredicted RBP9.61□□□□□ -0.87
SOX6-211ENST00000528429 SRCIN1Q9C0H9 1055 aa9.61□□□□□ -0.87
SOX6-211ENST00000528429 PARP4Q9UKK3 1724 aaKnown RBP9.61□□□□□ -0.87
SOX6-211ENST00000528429 SCN11AQ9UI33 1791 aa9.61□□□□□ -0.87
SOX6-211ENST00000528429 VIRMAQ69YN4 1812 aaKnown RBP9.61□□□□□ -0.87
SOX6-211ENST00000528429 ERVV-2B6SEH9 535 aa9.6□□□□□ -0.87
SOX6-211ENST00000528429 GNAI2P04899 355 aa9.6□□□□□ -0.87
SOX6-211ENST00000528429 ANKRD44Q8N8A2 993 aa9.6□□□□□ -0.87
SOX6-211ENST00000528429 DDX21Q9NR30 783 aaKnown RBP eCLIP9.6□□□□□ -0.87
SOX6-211ENST00000528429 HYPKQ9NX55 129 aa9.6□□□□□ -0.87
SOX6-211ENST00000528429 TMOD3Q9NYL9 352 aa9.6□□□□□ -0.87
SOX6-211ENST00000528429 MAP3K2Q9Y2U5 619 aa9.6□□□□□ -0.87
SOX6-211ENST00000528429 EXOC5O00471 708 aa9.6□□□□□ -0.87
SOX6-211ENST00000528429 GNAI3P08754 354 aa9.6□□□□□ -0.87
SOX6-211ENST00000528429 NUCB1Q02818 461 aa9.6□□□□□ -0.87
SOX6-211ENST00000528429 CHD1LQ86WJ1 897 aa9.6□□□□□ -0.87
SOX6-211ENST00000528429 C8orf37Q96NL8 207 aa9.6□□□□□ -0.87
SOX6-211ENST00000528429 COL14A1Q05707 1796 aaKnown RBP9.6□□□□□ -0.87
SOX6-211ENST00000528429 ADAMTS7Q9UKP4 1686 aa9.6□□□□□ -0.87
SOX6-211ENST00000528429 UBTFL1P0CB47 393 aaPredicted RBP9.59□□□□□ -0.87
SOX6-211ENST00000528429 NKX1-1Q15270 411 aaPredicted RBP9.59□□□□□ -0.87
SOX6-211ENST00000528429 RPAP2Q8IXW5 612 aaPredicted RBP9.59□□□□□ -0.87
SOX6-211ENST00000528429 GCC1Q96CN9 775 aa9.59□□□□□ -0.87
SOX6-211ENST00000528429 ZBTB47Q9UFB7 747 aaPredicted RBP9.59□□□□□ -0.87
SOX6-211ENST00000528429 LRRFIP2Q9Y608 721 aaKnown RBP9.59□□□□□ -0.87
SOX6-211ENST00000528429 ATP10DQ9P241 1426 aa9.59□□□□□ -0.87
SOX6-211ENST00000528429 ADCY9O60503 1353 aa9.59□□□□□ -0.87
SOX6-211ENST00000528429 C8orf34Q49A92 452 aa9.59□□□□□ -0.87
SOX6-211ENST00000528429 NGLY1Q96IV0 654 aa9.59□□□□□ -0.87
SOX6-211ENST00000528429 USP44Q9H0E7 712 aa9.59□□□□□ -0.87
SOX6-211ENST00000528429 MRC1P22897 1456 aa9.59□□□□□ -0.87
SOX6-211ENST00000528429 DDX58O95786 925 aaKnown RBP9.59□□□□□ -0.88
SOX6-211ENST00000528429 PDIA6Q15084 440 aa9.59□□□□□ -0.88
SOX6-211ENST00000528429 COPS6Q7L5N1 327 aa9.59□□□□□ -0.88
SOX6-211ENST00000528429 RIC3Q7Z5B4 369 aa9.59□□□□□ -0.88
SOX6-211ENST00000528429 XAGE3Q8WTP9 111 aa9.59□□□□□ -0.88
SOX6-211ENST00000528429 RNF216Q9NWF9 866 aaPredicted RBP9.59□□□□□ -0.88
SOX6-211ENST00000528429 COL22A1Q8NFW1 1626 aaPredicted RBP9.58□□□□□ -0.88
SOX6-211ENST00000528429 SIPA1L3O60292 1781 aaPredicted RBP9.58□□□□□ -0.88
SOX6-211ENST00000528429 KAT6BQ8WYB5 2073 aa9.58□□□□□ -0.88
SOX6-211ENST00000528429 HMMRO75330 724 aa9.58□□□□□ -0.88
SOX6-211ENST00000528429 ANP32AP39687 249 aaKnown RBP9.58□□□□□ -0.88
SOX6-211ENST00000528429 CWF19L2Q2TBE0 894 aaKnown RBP9.58□□□□□ -0.88
SOX6-211ENST00000528429 BEND3Q5T5X7 828 aa9.58□□□□□ -0.88
SOX6-211ENST00000528429 KSR2Q6VAB6 950 aa9.58□□□□□ -0.88
SOX6-211ENST00000528429 SPATA31A1Q5TZJ5 1347 aa9.58□□□□□ -0.88
SOX6-211ENST00000528429 NBPF7P0C2Y1 421 aaPredicted RBP9.58□□□□□ -0.88
SOX6-211ENST00000528429 CERKQ8TCT0 537 aa9.58□□□□□ -0.88
SOX6-211ENST00000528429 ASAP1Q9ULH1 1129 aa9.58□□□□□ -0.88
SOX6-211ENST00000528429 ZNF330Q9Y3S2 320 aaPredicted RBP9.58□□□□□ -0.88
SOX6-211ENST00000528429 DDB1Q16531 1140 aa9.57□□□□□ -0.88
SOX6-211ENST00000528429 PIGBQ92521 554 aa9.57□□□□□ -0.88
SOX6-211ENST00000528429 RBM42Q9BTD8 480 aaKnown RBP9.57□□□□□ -0.88
SOX6-211ENST00000528429 DCTPP1Q9H773 170 aa9.57□□□□□ -0.88
SOX6-211ENST00000528429 C9orf78Q9NZ63 289 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms