RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 BRD2P25440 801 aaKnown RBP8.47□□□□□ -1.05
CTNND1-218ENST00000528232 FKBP4Q02790 459 aaKnown RBP eCLIP8.47□□□□□ -1.05
CTNND1-218ENST00000528232 TBC1D32Q96NH3 1257 aa8.47□□□□□ -1.05
CTNND1-218ENST00000528232 SH2B1Q9NRF2 756 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-218ENST00000528232 TTC22Q5TAA0 569 aa8.47□□□□□ -1.05
CTNND1-218ENST00000528232 TTLL5Q6EMB2 1281 aa8.47□□□□□ -1.05
CTNND1-218ENST00000528232 PRIMPOLQ96LW4 560 aa8.47□□□□□ -1.05
CTNND1-218ENST00000528232 TXLNAP40222 546 aa8.46□□□□□ -1.05
CTNND1-218ENST00000528232 NPATQ14207 1427 aa8.46□□□□□ -1.05
CTNND1-218ENST00000528232 ABCA8O94911 1581 aa8.46□□□□□ -1.05
CTNND1-218ENST00000528232 YTHDC2Q9H6S0 1430 aaKnown RBP8.46□□□□□ -1.06
CTNND1-218ENST00000528232 PIP4K2AP48426 406 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-218ENST00000528232 MRPL50Q8N5N7 158 aaKnown RBP8.46□□□□□ -1.06
CTNND1-218ENST00000528232 MYO6Q9UM54 1294 aa8.46□□□□□ -1.06
CTNND1-218ENST00000528232 PER1O15534 1290 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-218ENST00000528232 SMC2O95347 1197 aa8.46□□□□□ -1.06
CTNND1-218ENST00000528232 CEBPAP49715 358 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-218ENST00000528232 MPRIPQ6WCQ1 1025 aa8.46□□□□□ -1.06
CTNND1-218ENST00000528232 TBC1D9Q6ZT07 1266 aa8.46□□□□□ -1.06
CTNND1-218ENST00000528232 DACH1Q9UI36 760 aa8.46□□□□□ -1.06
CTNND1-218ENST00000528232 A0A1W2PP64 1363 aa8.46□□□□□ -1.06
CTNND1-218ENST00000528232 FAM83GA6ND36 823 aa8.46□□□□□ -1.06
CTNND1-218ENST00000528232 IMMTQ16891 758 aaKnown RBP8.46□□□□□ -1.06
CTNND1-218ENST00000528232 GBP3Q9H0R5 595 aa8.46□□□□□ -1.06
CTNND1-218ENST00000528232 TMOD3Q9NYL9 352 aa8.46□□□□□ -1.06
CTNND1-218ENST00000528232 CEBPZQ03701 1054 aaKnown RBP8.45□□□□□ -1.06
CTNND1-218ENST00000528232 TRPM2O94759 1503 aa8.45□□□□□ -1.06
CTNND1-218ENST00000528232 KDM4AO75164 1064 aa8.45□□□□□ -1.06
CTNND1-218ENST00000528232 ME1P48163 572 aa8.45□□□□□ -1.06
CTNND1-218ENST00000528232 PRPF40BQ6NWY9 871 aaKnown RBP8.45□□□□□ -1.06
CTNND1-218ENST00000528232 PDILTQ8N807 584 aa8.45□□□□□ -1.06
CTNND1-218ENST00000528232 WASF1Q92558 559 aa8.45□□□□□ -1.06
CTNND1-218ENST00000528232 FMNL2Q96PY5 1086 aa8.45□□□□□ -1.06
CTNND1-218ENST00000528232 FILIP1LQ4L180 1135 aa8.45□□□□□ -1.06
CTNND1-218ENST00000528232 TXLNBQ8N3L3 684 aa8.45□□□□□ -1.06
CTNND1-218ENST00000528232 NUP62CLQ9H1M0 184 aa8.45□□□□□ -1.06
CTNND1-218ENST00000528232 BLMP54132 1417 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-218ENST00000528232 KRT28Q7Z3Y7 464 aa8.45□□□□□ -1.06
CTNND1-218ENST00000528232 EVI5LQ96CN4 794 aa8.45□□□□□ -1.06
CTNND1-218ENST00000528232 U3KPZ7 1027 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-218ENST00000528232 IGHMBP2P38935 993 aaKnown RBP8.44□□□□□ -1.06
CTNND1-218ENST00000528232 KIAA1328Q86T90 577 aa8.44□□□□□ -1.06
CTNND1-218ENST00000528232 CARD14Q9BXL6 1004 aa8.44□□□□□ -1.06
CTNND1-218ENST00000528232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.44□□□□□ -1.06
CTNND1-218ENST00000528232 NAP1L1P55209 391 aaKnown RBP8.44□□□□□ -1.06
CTNND1-218ENST00000528232 MICALCLQ6ZW33 695 aa8.44□□□□□ -1.06
CTNND1-218ENST00000528232 SMARCE1Q969G3 411 aa8.44□□□□□ -1.06
CTNND1-218ENST00000528232 POLKQ9UBT6 870 aa8.44□□□□□ -1.06
CTNND1-218ENST00000528232 NOL7Q9UMY1 257 aaKnown RBP8.44□□□□□ -1.06
CTNND1-218ENST00000528232 MAP3K2Q9Y2U5 619 aa8.44□□□□□ -1.06
CTNND1-218ENST00000528232 METTL24Q5JXM2 366 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 CCDC91Q7Z6B0 441 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 IFNL2Q8IZJ0 200 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 CCDC43Q96MW1 224 aaKnown RBP8.43□□□□□ -1.06
CTNND1-218ENST00000528232 FLT4P35916 1363 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 CCDC83Q8IWF9 413 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 KDM5CP41229 1560 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 CBFA2T2O43439 604 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 FOXO3O43524 673 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 TDO2P48775 406 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 BOLA2Q9H3K6 86 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 PCDHB15Q9Y5E8 787 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 PREX2Q70Z35 1606 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 IVLP07476 585 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 TERF1P54274 439 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 EIF4A2Q14240 407 aaKnown RBP8.43□□□□□ -1.06
CTNND1-218ENST00000528232 ANKRD24Q8TF21 1146 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 TNPO1Q92973 898 aaKnown RBP8.43□□□□□ -1.06
CTNND1-218ENST00000528232 AIDAQ96BJ3 306 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 LIMCH1Q9UPQ0 1083 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 SAMD9LQ8IVG5 1584 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 IFIT1P09914 478 aaKnown RBP8.43□□□□□ -1.06
CTNND1-218ENST00000528232 ECHDC1Q9NTX5 307 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 MAGEC2Q9UBF1 373 aaPredicted RBP8.43□□□□□ -1.06
CTNND1-218ENST00000528232 ZNF652Q9Y2D9 606 aa8.43□□□□□ -1.06
CTNND1-218ENST00000528232 ATP10AO60312 1499 aa8.42□□□□□ -1.06
CTNND1-218ENST00000528232 ATP2B1P20020 1258 aa8.42□□□□□ -1.06
CTNND1-218ENST00000528232 ANKRD44Q8N8A2 993 aa8.42□□□□□ -1.06
CTNND1-218ENST00000528232 CDK5RAP3Q96JB5 506 aa8.42□□□□□ -1.06
CTNND1-218ENST00000528232 UBAC1Q9BSL1 405 aa8.42□□□□□ -1.06
CTNND1-218ENST00000528232 KDM6BO15054 1643 aa8.42□□□□□ -1.06
CTNND1-218ENST00000528232 CEP57L1Q8IYX8 460 aa8.42□□□□□ -1.06
CTNND1-218ENST00000528232 EPS15P42566 896 aa8.42□□□□□ -1.06
CTNND1-218ENST00000528232 MAP3K11Q16584 847 aa8.42□□□□□ -1.06
CTNND1-218ENST00000528232 CCDC183Q5T5S1 534 aa8.42□□□□□ -1.06
CTNND1-218ENST00000528232 MTMR7Q9Y216 660 aa8.42□□□□□ -1.06
CTNND1-218ENST00000528232 KDM5DQ9BY66 1539 aa8.42□□□□□ -1.06
CTNND1-218ENST00000528232 SHTN1A0MZ66 631 aa8.42□□□□□ -1.06
CTNND1-218ENST00000528232 HSP90AB2PQ58FF8 381 aa8.42□□□□□ -1.06
CTNND1-218ENST00000528232 SPC24Q8NBT2 197 aa8.42□□□□□ -1.06
CTNND1-218ENST00000528232 TEX13AQ9BXU3 409 aaPredicted RBP8.42□□□□□ -1.06
CTNND1-218ENST00000528232 SHROOM2Q13796 1616 aa8.42□□□□□ -1.06
CTNND1-218ENST00000528232 EDC4Q6P2E9 1401 aaKnown RBP8.41□□□□□ -1.06
CTNND1-218ENST00000528232 HMGB2P26583 209 aaKnown RBP8.41□□□□□ -1.06
CTNND1-218ENST00000528232 SSFA2P28290 1259 aa8.41□□□□□ -1.06
CTNND1-218ENST00000528232 C8orf34Q49A92 452 aa8.41□□□□□ -1.06
CTNND1-218ENST00000528232 PPP1R42Q7Z4L9 355 aa8.41□□□□□ -1.06
CTNND1-218ENST00000528232 NUP133Q8WUM0 1156 aa8.41□□□□□ -1.06
CTNND1-218ENST00000528232 UPF3BQ9BZI7 483 aaKnown RBP8.41□□□□□ -1.06
CTNND1-218ENST00000528232 RAI14Q9P0K7 980 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms