RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 C4AP0C0L4 1744 aa15.32■□□□□ 0.04
CCDC90B-210ENST00000528149 TJP1Q07157 1748 aa15.32■□□□□ 0.04
CCDC90B-210ENST00000528149 SBF1O95248 1867 aa15.32■□□□□ 0.04
CCDC90B-210ENST00000528149 SMARCC1Q92922 1105 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-210ENST00000528149 SIPA1L3O60292 1781 aaPredicted RBP15.31■□□□□ 0.04
CCDC90B-210ENST00000528149 ITPK1Q13572 414 aa15.31■□□□□ 0.04
CCDC90B-210ENST00000528149 FAM161AQ3B820 660 aa15.31■□□□□ 0.04
CCDC90B-210ENST00000528149 CCDC146Q8IYE0 955 aa15.31■□□□□ 0.04
CCDC90B-210ENST00000528149 PNISRQ8TF01 805 aaKnown RBP15.31■□□□□ 0.04
CCDC90B-210ENST00000528149 TMOD3Q9NYL9 352 aa15.31■□□□□ 0.04
CCDC90B-210ENST00000528149 ADAMTS8Q9UP79 889 aa15.31■□□□□ 0.04
CCDC90B-210ENST00000528149 RNMTO43148 476 aaKnown RBP15.3■□□□□ 0.04
CCDC90B-210ENST00000528149 DCTN1Q14203 1278 aa15.3■□□□□ 0.04
CCDC90B-210ENST00000528149 AMOTQ4VCS5 1084 aa15.3■□□□□ 0.04
CCDC90B-210ENST00000528149 C1orf141Q5JVX7 400 aa15.3■□□□□ 0.04
CCDC90B-210ENST00000528149 LOC102724428A0A0B4J2F2 783 aa15.29■□□□□ 0.04
CCDC90B-210ENST00000528149 KCNA3P22001 575 aa15.29■□□□□ 0.04
CCDC90B-210ENST00000528149 SIK1P57059 783 aa15.29■□□□□ 0.04
CCDC90B-210ENST00000528149 SLC39A6Q13433 755 aa15.29■□□□□ 0.04
CCDC90B-210ENST00000528149 AKAP4Q5JQC9 854 aa15.29■□□□□ 0.04
CCDC90B-210ENST00000528149 FAM9BQ8IZU0 186 aa15.29■□□□□ 0.04
CCDC90B-210ENST00000528149 NFATC2IPQ8NCF5 419 aa15.29■□□□□ 0.04
CCDC90B-210ENST00000528149 DCAF5Q96JK2 942 aa15.29■□□□□ 0.04
CCDC90B-210ENST00000528149 COL5A3P25940 1745 aaPredicted RBP15.29■□□□□ 0.04
CCDC90B-210ENST00000528149 FOXN1O15353 648 aa15.28■□□□□ 0.04
CCDC90B-210ENST00000528149 IL17REQ8NFR9 667 aa15.28■□□□□ 0.04
CCDC90B-210ENST00000528149 PLEKHF1Q96S99 279 aa15.28■□□□□ 0.04
CCDC90B-210ENST00000528149 CCDC87Q9NVE4 849 aa15.28■□□□□ 0.04
CCDC90B-210ENST00000528149 MAPK8IP3Q9UPT6 1336 aa15.27■□□□□ 0.04
CCDC90B-210ENST00000528149 CABP4P57796 275 aa15.27■□□□□ 0.04
CCDC90B-210ENST00000528149 MCM10Q7L590 875 aa15.26■□□□□ 0.03
CCDC90B-210ENST00000528149 THUMPD2Q9BTF0 503 aaKnown RBP15.26■□□□□ 0.03
CCDC90B-210ENST00000528149 UBR2Q8IWV8 1755 aa15.26■□□□□ 0.03
CCDC90B-210ENST00000528149 ERVV-2B6SEH9 535 aa15.25■□□□□ 0.03
CCDC90B-210ENST00000528149 KCNQ3O43525 872 aa15.25■□□□□ 0.03
CCDC90B-210ENST00000528149 PTCD1O75127 700 aaKnown RBP15.25■□□□□ 0.03
CCDC90B-210ENST00000528149 DALRD3Q5D0E6 543 aaKnown RBP15.25■□□□□ 0.03
CCDC90B-210ENST00000528149 NLGN1Q8N2Q7 840 aa15.25■□□□□ 0.03
CCDC90B-210ENST00000528149 RUNDC1Q96C34 613 aa15.25■□□□□ 0.03
CCDC90B-210ENST00000528149 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
CCDC90B-210ENST00000528149 SLC52A2Q9HAB3 445 aa15.25■□□□□ 0.03
CCDC90B-210ENST00000528149 PIM2Q9P1W9 311 aa15.25■□□□□ 0.03
CCDC90B-210ENST00000528149 MKRN1Q9UHC7 482 aaKnown RBP15.25■□□□□ 0.03
CCDC90B-210ENST00000528149 NEFMP07197 916 aa15.24■□□□□ 0.03
CCDC90B-210ENST00000528149 RASSF7Q02833 373 aa15.24■□□□□ 0.03
CCDC90B-210ENST00000528149 PNNQ9H307 717 aaKnown RBP15.24■□□□□ 0.03
CCDC90B-210ENST00000528149 PRDM10Q9NQV6 1147 aa15.24■□□□□ 0.03
CCDC90B-210ENST00000528149 RRP7AQ9Y3A4 280 aaKnown RBP15.24■□□□□ 0.03
CCDC90B-210ENST00000528149 TIAM2Q8IVF5 1701 aa15.23■□□□□ 0.03
CCDC90B-210ENST00000528149 HSP90AB1P08238 724 aaKnown RBP15.23■□□□□ 0.03
CCDC90B-210ENST00000528149 VEGFAP15692 232 aaPredicted RBP15.23■□□□□ 0.03
CCDC90B-210ENST00000528149 ATP6V1AP38606 617 aa15.23■□□□□ 0.03
CCDC90B-210ENST00000528149 GAS2L2Q8NHY3 880 aa15.23■□□□□ 0.03
CCDC90B-210ENST00000528149 PARP3Q9Y6F1 533 aa15.23■□□□□ 0.03
CCDC90B-210ENST00000528149 ZC3H4Q9UPT8 1303 aaKnown RBP15.22■□□□□ 0.03
CCDC90B-210ENST00000528149 MYH14Q7Z406 1995 aaKnown RBP15.22■□□□□ 0.03
CCDC90B-210ENST00000528149 GNAT3A8MTJ3 354 aa15.22■□□□□ 0.03
CCDC90B-210ENST00000528149 GYS1P13807 737 aa15.22■□□□□ 0.03
CCDC90B-210ENST00000528149 NFE2L2Q16236 605 aa15.22■□□□□ 0.03
CCDC90B-210ENST00000528149 TRAPPC3LQ5T215 181 aa15.22■□□□□ 0.03
CCDC90B-210ENST00000528149 CEMIPQ8WUJ3 1361 aa15.22■□□□□ 0.03
CCDC90B-210ENST00000528149 GLTPD2A6NH11 291 aa15.21■□□□□ 0.03
CCDC90B-210ENST00000528149 RTCBQ9Y3I0 505 aaKnown RBP15.21■□□□□ 0.03
CCDC90B-210ENST00000528149 ZNF831Q5JPB2 1677 aa15.21■□□□□ 0.03
CCDC90B-210ENST00000528149 APAF1O14727 1248 aa15.2■□□□□ 0.02
CCDC90B-210ENST00000528149 CHRNA5P30532 468 aa15.2■□□□□ 0.02
CCDC90B-210ENST00000528149 TMPOP42166 694 aaKnown RBP15.2■□□□□ 0.02
CCDC90B-210ENST00000528149 ARHGEF1Q92888 912 aaKnown RBP15.2■□□□□ 0.02
CCDC90B-210ENST00000528149 ABHD8Q96I13 439 aa15.2■□□□□ 0.02
CCDC90B-210ENST00000528149 CREBZFQ9NS37 354 aa15.2■□□□□ 0.02
CCDC90B-210ENST00000528149 MIS18AQ9NYP9 233 aa15.2■□□□□ 0.02
CCDC90B-210ENST00000528149 PRAMEF22A3QJZ6 481 aa15.19■□□□□ 0.02
CCDC90B-210ENST00000528149 CTCFP49711 727 aaPredicted RBP15.19■□□□□ 0.02
CCDC90B-210ENST00000528149 NEUROD2Q15784 382 aa15.19■□□□□ 0.02
CCDC90B-210ENST00000528149 DNAJC10Q8IXB1 793 aa15.19■□□□□ 0.02
CCDC90B-210ENST00000528149 KDM3BQ7LBC6 1761 aa15.19■□□□□ 0.02
CCDC90B-210ENST00000528149 POTECB2RU33 542 aa15.18■□□□□ 0.02
CCDC90B-210ENST00000528149 CNTNAP1P78357 1384 aa15.18■□□□□ 0.02
CCDC90B-210ENST00000528149 RIPK4P57078 832 aa15.17■□□□□ 0.02
CCDC90B-210ENST00000528149 AIDAQ96BJ3 306 aa15.17■□□□□ 0.02
CCDC90B-210ENST00000528149 CCDC88AQ3V6T2 1871 aa15.16■□□□□ 0.02
CCDC90B-210ENST00000528149 LMNB1P20700 586 aa15.16■□□□□ 0.02
CCDC90B-210ENST00000528149 RFC4P35249 363 aa15.16■□□□□ 0.02
CCDC90B-210ENST00000528149 PIP4K2AP48426 406 aaPredicted RBP15.16■□□□□ 0.02
CCDC90B-210ENST00000528149 LBX1P52954 281 aa15.16■□□□□ 0.02
CCDC90B-210ENST00000528149 DDR1Q08345 913 aa15.16■□□□□ 0.02
CCDC90B-210ENST00000528149 ZNF496Q96IT1 587 aaPredicted RBP15.16■□□□□ 0.02
CCDC90B-210ENST00000528149 MLLT1Q03111 559 aaPredicted RBP15.15■□□□□ 0.02
CCDC90B-210ENST00000528149 TEFQ10587 303 aa15.15■□□□□ 0.02
CCDC90B-210ENST00000528149 RTF1Q92541 710 aaKnown RBP15.15■□□□□ 0.02
CCDC90B-210ENST00000528149 CNTNAP4Q9C0A0 1308 aa15.15■□□□□ 0.02
CCDC90B-210ENST00000528149 CRKLP46109 303 aaKnown RBP15.14■□□□□ 0.01
CCDC90B-210ENST00000528149 INTS5Q6P9B9 1019 aaKnown RBP15.14■□□□□ 0.01
CCDC90B-210ENST00000528149 TRIM35Q9UPQ4 493 aa15.14■□□□□ 0.01
CCDC90B-210ENST00000528149 SALL2Q9Y467 1007 aaPredicted RBP15.14■□□□□ 0.01
CCDC90B-210ENST00000528149 POTEIP0CG38 1075 aa15.13■□□□□ 0.01
CCDC90B-210ENST00000528149 POTEJP0CG39 1038 aa15.13■□□□□ 0.01
CCDC90B-210ENST00000528149 LMOD3Q0VAK6 560 aa15.13■□□□□ 0.01
CCDC90B-210ENST00000528149 SRP68Q9UHB9 627 aaKnown RBP15.13■□□□□ 0.01
CCDC90B-210ENST00000528149 BTBD11A6QL63 1104 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms