RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 KAT6BQ8WYB5 2073 aa16.24■□□□□ 0.19
RBM39-243ENST00000528062 IPO8O15397 1037 aaKnown RBP16.24■□□□□ 0.19
RBM39-243ENST00000528062 ALDH1L2Q3SY69 923 aa16.24■□□□□ 0.19
RBM39-243ENST00000528062 GZF1Q9H116 711 aaPredicted RBP16.24■□□□□ 0.19
RBM39-243ENST00000528062 FSD2A1L4K1 749 aa16.23■□□□□ 0.19
RBM39-243ENST00000528062 XRCC6P12956 609 aaKnown RBP eCLIP16.23■□□□□ 0.193e-9■■□□□ 12.4
RBM39-243ENST00000528062 RNMTO43148 476 aaKnown RBP16.23■□□□□ 0.19
RBM39-243ENST00000528062 RRAGDQ9NQL2 400 aaPredicted RBP16.23■□□□□ 0.19
RBM39-243ENST00000528062 KDM3BQ7LBC6 1761 aa16.22■□□□□ 0.19
RBM39-243ENST00000528062 PAPPAQ13219 1627 aa16.22■□□□□ 0.19
RBM39-243ENST00000528062 RBM25P49756 843 aaKnown RBP16.22■□□□□ 0.19
RBM39-243ENST00000528062 CHD1LQ86WJ1 897 aa16.22■□□□□ 0.19
RBM39-243ENST00000528062 NHSQ6T4R5 1651 aa16.22■□□□□ 0.19
RBM39-243ENST00000528062 DDIT3P35638 169 aa16.21■□□□□ 0.19
RBM39-243ENST00000528062 HTATSF1O43719 755 aaKnown RBP16.21■□□□□ 0.19
RBM39-243ENST00000528062 HSCBQ8IWL3 235 aa16.21■□□□□ 0.19
RBM39-243ENST00000528062 DCAF5Q96JK2 942 aa16.21■□□□□ 0.19
RBM39-243ENST00000528062 BCL9O00512 1426 aa16.21■□□□□ 0.18
RBM39-243ENST00000528062 TRAK2O60296 914 aa16.2■□□□□ 0.18
RBM39-243ENST00000528062 C1orf115Q9H7X2 142 aa16.2■□□□□ 0.18
RBM39-243ENST00000528062 GOLGA6L3A6NEY3 463 aa16.19■□□□□ 0.18
RBM39-243ENST00000528062 ZBTB7BO15156 539 aaPredicted RBP16.19■□□□□ 0.18
RBM39-243ENST00000528062 KRT27Q7Z3Y8 459 aa16.19■□□□□ 0.18
RBM39-243ENST00000528062 TSPYL6Q8N831 410 aa16.19■□□□□ 0.18
RBM39-243ENST00000528062 PANK2Q9BZ23 570 aa16.19■□□□□ 0.18
RBM39-243ENST00000528062 BRPF1P55201 1214 aaPredicted RBP16.19■□□□□ 0.18
RBM39-243ENST00000528062 LMOD3Q0VAK6 560 aa16.19■□□□□ 0.18
RBM39-243ENST00000528062 PTF1AQ7RTS3 328 aa16.19■□□□□ 0.18
RBM39-243ENST00000528062 RTF1Q92541 710 aaKnown RBP16.19■□□□□ 0.18
RBM39-243ENST00000528062 BTAF1O14981 1849 aa16.19■□□□□ 0.18
RBM39-243ENST00000528062 VAMP4O75379 141 aa16.18■□□□□ 0.18
RBM39-243ENST00000528062 MRPL50Q8N5N7 158 aaKnown RBP16.18■□□□□ 0.18
RBM39-243ENST00000528062 UBR2Q8IWV8 1755 aa16.18■□□□□ 0.18
RBM39-243ENST00000528062 HSP90AB1P08238 724 aaKnown RBP16.18■□□□□ 0.18
RBM39-243ENST00000528062 KIF2CQ99661 725 aa16.18■□□□□ 0.18
RBM39-243ENST00000528062 BMP2KLQ5H9B9 411 aa16.17■□□□□ 0.18
RBM39-243ENST00000528062 SNX21Q969T3 373 aa16.17■□□□□ 0.18
RBM39-243ENST00000528062 SIRT2Q8IXJ6 389 aa16.17■□□□□ 0.18
RBM39-243ENST00000528062 ACSBG1Q96GR2 724 aa16.17■□□□□ 0.18
RBM39-243ENST00000528062 SLC52A2Q9HAB3 445 aa16.17■□□□□ 0.18
RBM39-243ENST00000528062 KCNQ2O43526 872 aa16.16■□□□□ 0.18
RBM39-243ENST00000528062 ZNF853P0CG23 659 aa16.16■□□□□ 0.18
RBM39-243ENST00000528062 ANKRD45Q5TZF3 282 aa16.16■□□□□ 0.18
RBM39-243ENST00000528062 NFATC2IPQ8NCF5 419 aa16.16■□□□□ 0.18
RBM39-243ENST00000528062 TNS1Q9HBL0 1735 aaKnown RBP16.16■□□□□ 0.18
RBM39-243ENST00000528062 MIS18AQ9NYP9 233 aa16.16■□□□□ 0.18
RBM39-243ENST00000528062 ERVV-2B6SEH9 535 aa16.15■□□□□ 0.18
RBM39-243ENST00000528062 ELL2O00472 640 aaPredicted RBP16.15■□□□□ 0.18
RBM39-243ENST00000528062 CD2BP2O95400 341 aaKnown RBP16.15■□□□□ 0.18
RBM39-243ENST00000528062 ZNF428Q96B54 188 aa16.15■□□□□ 0.18
RBM39-243ENST00000528062 PRIM1P49642 420 aaKnown RBP16.14■□□□□ 0.17
RBM39-243ENST00000528062 PIGBQ92521 554 aa16.14■□□□□ 0.17
RBM39-243ENST00000528062 ARHGAP45Q92619 1136 aa16.14■□□□□ 0.17
RBM39-243ENST00000528062 MBIPQ9NS73 344 aa16.14■□□□□ 0.17
RBM39-243ENST00000528062 KCPQ6ZWJ8 1503 aa16.13■□□□□ 0.17
RBM39-243ENST00000528062 CHL1O00533 1208 aa16.13■□□□□ 0.17
RBM39-243ENST00000528062 KCNQ3O43525 872 aa16.13■□□□□ 0.17
RBM39-243ENST00000528062 TBC1D9Q6ZT07 1266 aa16.13■□□□□ 0.17
RBM39-243ENST00000528062 TNPO1Q92973 898 aaKnown RBP16.13■□□□□ 0.17
RBM39-243ENST00000528062 GCC1Q96CN9 775 aa16.13■□□□□ 0.17
RBM39-243ENST00000528062 C5P01031 1676 aa16.13■□□□□ 0.17
RBM39-243ENST00000528062 DDX11L8A8MPP1 907 aa16.13■□□□□ 0.17
RBM39-243ENST00000528062 EIF5BO60841 1220 aaKnown RBP16.13■□□□□ 0.17
RBM39-243ENST00000528062 TEFQ10587 303 aa16.13■□□□□ 0.17
RBM39-243ENST00000528062 CFAP44Q96MT7 982 aa16.13■□□□□ 0.17
RBM39-243ENST00000528062 ABCC4O15439 1325 aa16.12■□□□□ 0.17
RBM39-243ENST00000528062 CABP4P57796 275 aa16.12■□□□□ 0.17
RBM39-243ENST00000528062 TAF7Q15545 349 aaPredicted RBP16.12■□□□□ 0.17
RBM39-243ENST00000528062 IFT57Q9NWB7 429 aa16.12■□□□□ 0.17
RBM39-243ENST00000528062 SLC39A6Q13433 755 aa16.11■□□□□ 0.17
RBM39-243ENST00000528062 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
RBM39-243ENST00000528062 C8orf58Q8NAV2 365 aa16.11■□□□□ 0.17
RBM39-243ENST00000528062 SYTL4Q96C24 671 aaPredicted RBP16.11■□□□□ 0.17
RBM39-243ENST00000528062 TMOD3Q9NYL9 352 aa16.11■□□□□ 0.17
RBM39-243ENST00000528062 LY75O60449 1722 aa16.11■□□□□ 0.17
RBM39-243ENST00000528062 GNAI1P63096 354 aa16.1■□□□□ 0.17
RBM39-243ENST00000528062 FAM196AQ6ZSG2 479 aa16.1■□□□□ 0.17
RBM39-243ENST00000528062 FOXD4L1Q9NU39 408 aa16.1■□□□□ 0.17
RBM39-243ENST00000528062 ASAP1Q9ULH1 1129 aa16.1■□□□□ 0.17
RBM39-243ENST00000528062 BTBD11A6QL63 1104 aa16.09■□□□□ 0.17
RBM39-243ENST00000528062 RAB3GAP1Q15042 981 aa16.09■□□□□ 0.17
RBM39-243ENST00000528062 KRT24Q2M2I5 525 aa16.09■□□□□ 0.17
RBM39-243ENST00000528062 TWISTNBQ3B726 338 aaPredicted RBP16.09■□□□□ 0.17
RBM39-243ENST00000528062 MRE11P49959 708 aa16.09■□□□□ 0.17
RBM39-243ENST00000528062 CALD1Q05682 793 aaKnown RBP16.09■□□□□ 0.17
RBM39-243ENST00000528062 ATG3Q9NT62 314 aa16.09■□□□□ 0.17
RBM39-243ENST00000528062 TSPYL4Q9UJ04 414 aa16.09■□□□□ 0.17
RBM39-243ENST00000528062 CIZ1Q9ULV3 898 aaPredicted RBP16.09■□□□□ 0.17
RBM39-243ENST00000528062 TJP1Q07157 1748 aa16.08■□□□□ 0.17
RBM39-243ENST00000528062 TRIM37O94972 964 aa16.08■□□□□ 0.16
RBM39-243ENST00000528062 ZNF790Q6PG37 636 aa16.08■□□□□ 0.16
RBM39-243ENST00000528062 GRPEL1Q9HAV7 217 aa16.08■□□□□ 0.16
RBM39-243ENST00000528062 HEG1Q9ULI3 1381 aa16.07■□□□□ 0.16
RBM39-243ENST00000528062 GSPT1P15170 499 aaKnown RBP16.07■□□□□ 0.16
RBM39-243ENST00000528062 CICQ96RK0 1608 aaPredicted RBP16.07■□□□□ 0.16
RBM39-243ENST00000528062 CHMP4BQ9H444 224 aaKnown RBP16.07■□□□□ 0.16
RBM39-243ENST00000528062 BABAM1Q9NWV8 329 aa16.07■□□□□ 0.16
RBM39-243ENST00000528062 LAMB4A4D0S4 1761 aa16.07■□□□□ 0.16
RBM39-243ENST00000528062 GAS2L3Q86XJ1 694 aa16.06■□□□□ 0.16
RBM39-243ENST00000528062 BCL11BQ9C0K0 894 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms