RNA–Protein interactions for RNA: ENST00000527646.5

VPS51-204, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS51, Length 2,144 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-204ENST00000527646 DBF4Q9UBU7 674 aaPredicted RBP23.14■■□□□ 1.3
VPS51-204ENST00000527646 GIGYF1O75420 1035 aaPredicted RBP23.13■■□□□ 1.29
VPS51-204ENST00000527646 HSP90AA1P07900 732 aaKnown RBP23.13■■□□□ 1.29
VPS51-204ENST00000527646 RRP9O43818 475 aaKnown RBP23.12■■□□□ 1.29
VPS51-204ENST00000527646 SCN11AQ9UI33 1791 aa23.12■■□□□ 1.29
VPS51-204ENST00000527646 SLC52A2Q9HAB3 445 aa23.12■■□□□ 1.29
VPS51-204ENST00000527646 HEG1Q9ULI3 1381 aa23.12■■□□□ 1.29
VPS51-204ENST00000527646 HSP90AB1P08238 724 aaKnown RBP23.11■■□□□ 1.29
VPS51-204ENST00000527646 SKOR2Q2VWA4 1001 aaPredicted RBP23.11■■□□□ 1.29
VPS51-204ENST00000527646 ESPNB1AK53 854 aa23.11■■□□□ 1.29
VPS51-204ENST00000527646 SRCIN1Q9C0H9 1055 aa23.11■■□□□ 1.29
VPS51-204ENST00000527646 KDM6AO15550 1401 aaPredicted RBP23.1■■□□□ 1.29
VPS51-204ENST00000527646 DCAF5Q96JK2 942 aa23.1■■□□□ 1.29
VPS51-204ENST00000527646 GBP4Q96PP9 640 aa23.1■■□□□ 1.29
VPS51-204ENST00000527646 WDR17Q8IZU2 1322 aa23.09■■□□□ 1.29
VPS51-204ENST00000527646 UBTFL1P0CB47 393 aaPredicted RBP23.09■■□□□ 1.29
VPS51-204ENST00000527646 DNAAF4Q8WXU2 420 aa23.09■■□□□ 1.29
VPS51-204ENST00000527646 PKD1L3Q7Z443 1732 aa23.08■■□□□ 1.29
VPS51-204ENST00000527646 ZNF790Q6PG37 636 aa23.08■■□□□ 1.29
VPS51-204ENST00000527646 PI4KAP2A4QPH2 592 aa23.08■■□□□ 1.28
VPS51-204ENST00000527646 TOM1L2Q6ZVM7 507 aa23.08■■□□□ 1.28
VPS51-204ENST00000527646 PI4KAP1Q8N8J0 262 aa23.08■■□□□ 1.28
VPS51-204ENST00000527646 USP44Q9H0E7 712 aa23.08■■□□□ 1.28
VPS51-204ENST00000527646 HSP90AA2PQ14568 343 aaPredicted RBP23.07■■□□□ 1.28
VPS51-204ENST00000527646 PLEKHM2Q8IWE5 1019 aa23.07■■□□□ 1.28
VPS51-204ENST00000527646 NFATC2IPQ8NCF5 419 aa23.07■■□□□ 1.28
VPS51-204ENST00000527646 TRIM44Q96DX7 344 aaPredicted RBP23.07■■□□□ 1.28
VPS51-204ENST00000527646 NHSL1Q5SYE7 1610 aa23.06■■□□□ 1.28
VPS51-204ENST00000527646 APBB1O00213 710 aa23.06■■□□□ 1.28
VPS51-204ENST00000527646 CYP27B1O15528 508 aa23.06■■□□□ 1.28
VPS51-204ENST00000527646 HYPKQ9NX55 129 aa23.06■■□□□ 1.28
VPS51-204ENST00000527646 ANXA1P04083 346 aa23.05■■□□□ 1.28
VPS51-204ENST00000527646 ATP8B2P98198 1209 aa23.05■■□□□ 1.28
VPS51-204ENST00000527646 LRRFIP2Q9Y608 721 aaKnown RBP23.05■■□□□ 1.28
VPS51-204ENST00000527646 TNPO1Q92973 898 aaKnown RBP23.05■■□□□ 1.28
VPS51-204ENST00000527646 COL5A2P05997 1499 aaPredicted RBP23.04■■□□□ 1.28
VPS51-204ENST00000527646 ABCA3Q99758 1704 aa23.04■■□□□ 1.28
VPS51-204ENST00000527646 RAB3GAP1Q15042 981 aa23.04■■□□□ 1.28
VPS51-204ENST00000527646 TTC5Q8N0Z6 440 aa23.04■■□□□ 1.28
VPS51-204ENST00000527646 PARP4Q9UKK3 1724 aaKnown RBP23.04■■□□□ 1.28
VPS51-204ENST00000527646 GSPT1P15170 499 aaKnown RBP23.03■■□□□ 1.28
VPS51-204ENST00000527646 SLC39A6Q13433 755 aa23.03■■□□□ 1.28
VPS51-204ENST00000527646 BEND3Q5T5X7 828 aa23.03■■□□□ 1.28
VPS51-204ENST00000527646 MRC1P22897 1456 aa23.03■■□□□ 1.28
VPS51-204ENST00000527646 TBC1D9Q6ZT07 1266 aa23.03■■□□□ 1.28
VPS51-204ENST00000527646 PRAMEF22A3QJZ6 481 aa23.02■■□□□ 1.28
VPS51-204ENST00000527646 C16orf71Q8IYS4 520 aaPredicted RBP23.02■■□□□ 1.28
VPS51-204ENST00000527646 DDX21Q9NR30 783 aaKnown RBP eCLIP23.02■■□□□ 1.28
VPS51-204ENST00000527646 PCDH11XQ9BZA7 1347 aa23.02■■□□□ 1.28
VPS51-204ENST00000527646 PCDH11YQ9BZA8 1340 aa23.02■■□□□ 1.28
VPS51-204ENST00000527646 ADCY9O60503 1353 aa23.02■■□□□ 1.28
VPS51-204ENST00000527646 SMARCA5O60264 1052 aaPredicted RBP23.02■■□□□ 1.28
VPS51-204ENST00000527646 DDX58O95786 925 aaKnown RBP23.02■■□□□ 1.28
VPS51-204ENST00000527646 CABP4P57796 275 aa23.02■■□□□ 1.28
VPS51-204ENST00000527646 TTC22Q5TAA0 569 aa23.02■■□□□ 1.28
VPS51-204ENST00000527646 PNMA6EA0A0J9YXQ4 647 aa23.01■■□□□ 1.27
VPS51-204ENST00000527646 KSR2Q6VAB6 950 aa23.01■■□□□ 1.27
VPS51-204ENST00000527646 CDC45O75419 566 aa23■■□□□ 1.27
VPS51-204ENST00000527646 ZCRB1Q8TBF4 217 aaKnown RBP23■■□□□ 1.27
VPS51-204ENST00000527646 EXOC6BQ9Y2D4 811 aa23■■□□□ 1.27
VPS51-204ENST00000527646 EVA1CP58658 441 aa23■■□□□ 1.27
VPS51-204ENST00000527646 PROSER3Q2NL68 480 aa23■■□□□ 1.27
VPS51-204ENST00000527646 CARD10Q9BWT7 1032 aa23■■□□□ 1.27
VPS51-204ENST00000527646 LRRCC1Q9C099 1032 aa23■■□□□ 1.27
VPS51-204ENST00000527646 MAP3K2Q9Y2U5 619 aa23■■□□□ 1.27
VPS51-204ENST00000527646 OTUD7AQ8TE49 926 aaPredicted RBP22.99■■□□□ 1.27
VPS51-204ENST00000527646 ALDH1L1O75891 902 aa22.98■■□□□ 1.27
VPS51-204ENST00000527646 IL2RBP14784 551 aa22.98■■□□□ 1.27
VPS51-204ENST00000527646 FMNL2Q96PY5 1086 aa22.98■■□□□ 1.27
VPS51-204ENST00000527646 STRN4Q9NRL3 753 aa22.98■■□□□ 1.27
VPS51-204ENST00000527646 HDAC5Q9UQL6 1122 aa22.98■■□□□ 1.27
VPS51-204ENST00000527646 TPM2P07951 284 aa22.97■■□□□ 1.27
VPS51-204ENST00000527646 SNRPA1P09661 255 aaKnown RBP22.97■■□□□ 1.27
VPS51-204ENST00000527646 ZNF496Q96IT1 587 aaPredicted RBP22.97■■□□□ 1.27
VPS51-204ENST00000527646 ERBB4Q15303 1308 aa22.97■■□□□ 1.27
VPS51-204ENST00000527646 IBTKQ9P2D0 1353 aaPredicted RBP22.97■■□□□ 1.27
VPS51-204ENST00000527646 NBPF7P0C2Y1 421 aaPredicted RBP22.96■■□□□ 1.27
VPS51-204ENST00000527646 SSH3Q8TE77 659 aa22.96■■□□□ 1.27
VPS51-204ENST00000527646 KIF2CQ99661 725 aa22.96■■□□□ 1.27
VPS51-204ENST00000527646 C5P01031 1676 aa22.95■■□□□ 1.27
VPS51-204ENST00000527646 GAS2L3Q86XJ1 694 aa22.95■■□□□ 1.26
VPS51-204ENST00000527646 C9orf78Q9NZ63 289 aaPredicted RBP22.95■■□□□ 1.26
VPS51-204ENST00000527646 CCDC173Q0VFZ6 552 aa22.94■■□□□ 1.26
VPS51-204ENST00000527646 PDIA6Q15084 440 aa22.94■■□□□ 1.26
VPS51-204ENST00000527646 CASC1Q6TDU7 716 aa22.94■■□□□ 1.26
VPS51-204ENST00000527646 PPP1R42Q7Z4L9 355 aa22.94■■□□□ 1.26
VPS51-204ENST00000527646 OSBPL3Q9H4L5 887 aa22.94■■□□□ 1.26
VPS51-204ENST00000527646 GOLGA6L22H0YM25 854 aa22.94■■□□□ 1.26
VPS51-204ENST00000527646 AIMP1Q12904 312 aaKnown RBP22.94■■□□□ 1.26
VPS51-204ENST00000527646 CLEC17AQ6ZS10 378 aa22.94■■□□□ 1.26
VPS51-204ENST00000527646 SRGAP3O43295 1099 aa22.93■■□□□ 1.26
VPS51-204ENST00000527646 LARP1Q6PKG0 1096 aaKnown RBP22.93■■□□□ 1.26
VPS51-204ENST00000527646 LINS1Q8NG48 757 aa22.93■■□□□ 1.26
VPS51-204ENST00000527646 K7ELQ4 463 aaPredicted RBP22.93■■□□□ 1.26
VPS51-204ENST00000527646 ERVV-2B6SEH9 535 aa22.92■■□□□ 1.26
VPS51-204ENST00000527646 RAB11FIP3O75154 756 aa22.92■■□□□ 1.26
VPS51-204ENST00000527646 MYL6BP14649 208 aa22.92■■□□□ 1.26
VPS51-204ENST00000527646 PDE1AP54750 535 aa22.92■■□□□ 1.26
VPS51-204ENST00000527646 POLA2Q14181 598 aa22.92■■□□□ 1.26
VPS51-204ENST00000527646 PPP1R9BQ96SB3 815 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms