RNA–Protein interactions for RNA: ENST00000527224.1

PACS1-205, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 3,024 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-205ENST00000527224 ADGRF5Q8IZF2 1346 aa22.03■■□□□ 1.12
PACS1-205ENST00000527224 SLFNL1Q499Z3 407 aa22.03■■□□□ 1.12
PACS1-205ENST00000527224 GGNBP2Q9H3C7 697 aa22.03■■□□□ 1.12
PACS1-205ENST00000527224 USP16Q9Y5T5 823 aa22.03■■□□□ 1.12
PACS1-205ENST00000527224 ATP10AO60312 1499 aa22.02■■□□□ 1.12
PACS1-205ENST00000527224 PPRC1Q5VV67 1664 aaKnown RBP22.02■■□□□ 1.12
PACS1-205ENST00000527224 CPA1P15085 419 aa22.02■■□□□ 1.12
PACS1-205ENST00000527224 MMP14P50281 582 aa22.02■■□□□ 1.12
PACS1-205ENST00000527224 FERMT3Q86UX7 667 aa22.02■■□□□ 1.12
PACS1-205ENST00000527224 EPC1Q9H2F5 836 aa22.02■■□□□ 1.12
PACS1-205ENST00000527224 RTL1A6NKG5 1358 aa22.02■■□□□ 1.11
PACS1-205ENST00000527224 ADGRB2O60241 1585 aa22.01■■□□□ 1.11
PACS1-205ENST00000527224 FAM193AP78312 1265 aa22.01■■□□□ 1.11
PACS1-205ENST00000527224 IL25Q9H293 177 aa22.01■■□□□ 1.11
PACS1-205ENST00000527224 IL16Q14005 1332 aa22.01■■□□□ 1.11
PACS1-205ENST00000527224 ANKRD65E5RJM6 399 aa22.01■■□□□ 1.11
PACS1-205ENST00000527224 RGS12O14924 1447 aa22.01■■□□□ 1.11
PACS1-205ENST00000527224 PLCH2O75038 1416 aa22.01■■□□□ 1.11
PACS1-205ENST00000527224 E2F4Q16254 413 aa22■■□□□ 1.11
PACS1-205ENST00000527224 MUM1L1Q5H9M0 696 aa22■■□□□ 1.11
PACS1-205ENST00000527224 TNMDQ9H2S6 317 aa22■■□□□ 1.11
PACS1-205ENST00000527224 RRP15Q9Y3B9 282 aaKnown RBP22■■□□□ 1.11
PACS1-205ENST00000527224 CCDC171Q6TFL3 1326 aa22■■□□□ 1.11
PACS1-205ENST00000527224 ABCF1Q8NE71 845 aaKnown RBP eCLIP22■■□□□ 1.11
PACS1-205ENST00000527224 DACT1Q9NYF0 836 aa22■■□□□ 1.11
PACS1-205ENST00000527224 SMC3Q9UQE7 1217 aa22■■□□□ 1.11
PACS1-205ENST00000527224 OAS2P29728 719 aaKnown RBP21.99■■□□□ 1.11
PACS1-205ENST00000527224 PDE1AP54750 535 aa21.99■■□□□ 1.11
PACS1-205ENST00000527224 ZNF165P49910 485 aa21.99■■□□□ 1.11
PACS1-205ENST00000527224 CEP85Q6P2H3 762 aa21.99■■□□□ 1.11
PACS1-205ENST00000527224 LMAN1P49257 510 aa21.98■■□□□ 1.11
PACS1-205ENST00000527224 MYCBPQ99417 103 aaPredicted RBP21.98■■□□□ 1.11
PACS1-205ENST00000527224 ATG3Q9NT62 314 aa21.98■■□□□ 1.11
PACS1-205ENST00000527224 ZCCHC11Q5TAX3 1644 aaKnown RBP21.98■■□□□ 1.11
PACS1-205ENST00000527224 CT47A1Q5JQC4 288 aaPredicted RBP21.98■■□□□ 1.11
PACS1-205ENST00000527224 TMCO3Q6UWJ1 677 aa21.98■■□□□ 1.11
PACS1-205ENST00000527224 SRLQ86TD4 932 aa21.98■■□□□ 1.11
PACS1-205ENST00000527224 ANKRD44Q8N8A2 993 aa21.98■■□□□ 1.11
PACS1-205ENST00000527224 A0A087WWV3 80 aa21.98■■□□□ 1.11
PACS1-205ENST00000527224 CCDC69A6NI79 296 aa21.98■■□□□ 1.11
PACS1-205ENST00000527224 TPM4P67936 248 aa21.98■■□□□ 1.11
PACS1-205ENST00000527224 KNDC1Q76NI1 1749 aa21.97■■□□□ 1.11
PACS1-205ENST00000527224 LARGE1O95461 756 aa21.97■■□□□ 1.11
PACS1-205ENST00000527224 TTC6Q86TZ1 520 aa21.97■■□□□ 1.11
PACS1-205ENST00000527224 JRKLQ9Y4A0 524 aa21.97■■□□□ 1.11
PACS1-205ENST00000527224 REREQ9P2R6 1566 aa21.97■■□□□ 1.11
PACS1-205ENST00000527224 PACS2Q86VP3 889 aa21.97■■□□□ 1.11
PACS1-205ENST00000527224 ARHGAP45Q92619 1136 aa21.97■■□□□ 1.11
PACS1-205ENST00000527224 TWISTNBQ3B726 338 aaPredicted RBP21.96■■□□□ 1.11
PACS1-205ENST00000527224 C8orf58Q8NAV2 365 aa21.96■■□□□ 1.11
PACS1-205ENST00000527224 PTCH1Q13635 1447 aa21.96■■□□□ 1.11
PACS1-205ENST00000527224 LMOD3Q0VAK6 560 aa21.96■■□□□ 1.11
PACS1-205ENST00000527224 CCDC83Q8IWF9 413 aa21.96■■□□□ 1.11
PACS1-205ENST00000527224 CCAR2Q8N163 923 aaKnown RBP21.96■■□□□ 1.11
PACS1-205ENST00000527224 NCAPGQ9BPX3 1015 aa21.96■■□□□ 1.11
PACS1-205ENST00000527224 SENP3Q9H4L4 574 aaPredicted RBP21.96■■□□□ 1.11
PACS1-205ENST00000527224 PIK3R4Q99570 1358 aa21.96■■□□□ 1.11
PACS1-205ENST00000527224 SASH3O75995 380 aa21.95■■□□□ 1.1
PACS1-205ENST00000527224 MEIS3Q99687 375 aa21.95■■□□□ 1.1
PACS1-205ENST00000527224 CASTP20810 708 aaKnown RBP21.95■■□□□ 1.1
PACS1-205ENST00000527224 AK2P54819 239 aa21.95■■□□□ 1.1
PACS1-205ENST00000527224 NCBP3Q53F19 620 aaKnown RBP21.95■■□□□ 1.1
PACS1-205ENST00000527224 ATP6V1DQ9Y5K8 247 aa21.95■■□□□ 1.1
PACS1-205ENST00000527224 KIF3BO15066 747 aa21.94■■□□□ 1.1
PACS1-205ENST00000527224 GJB2P29033 226 aa21.94■■□□□ 1.1
PACS1-205ENST00000527224 UNC5CLQ8IV45 518 aa21.94■■□□□ 1.1
PACS1-205ENST00000527224 DDX54Q8TDD1 881 aaKnown RBP21.94■■□□□ 1.1
PACS1-205ENST00000527224 FBXW7Q969H0 707 aa21.94■■□□□ 1.1
PACS1-205ENST00000527224 SLC26A8Q96RN1 970 aa21.94■■□□□ 1.1
PACS1-205ENST00000527224 FBLN1P23142 703 aa21.94■■□□□ 1.1
PACS1-205ENST00000527224 GUCY2CP25092 1073 aa21.94■■□□□ 1.1
PACS1-205ENST00000527224 PRKAR2BP31323 418 aa21.94■■□□□ 1.1
PACS1-205ENST00000527224 ADGRL1O94910 1474 aa21.94■■□□□ 1.1
PACS1-205ENST00000527224 HMOX1P09601 288 aa21.93■■□□□ 1.1
PACS1-205ENST00000527224 SNW1Q13573 536 aaKnown RBP21.93■■□□□ 1.1
PACS1-205ENST00000527224 MBIPQ9NS73 344 aa21.93■■□□□ 1.1
PACS1-205ENST00000527224 ZRANB2O95218 330 aaKnown RBP eCLIP21.93■■□□□ 1.1
PACS1-205ENST00000527224 MAP4K4O95819 1239 aaPredicted RBP21.93■■□□□ 1.1
PACS1-205ENST00000527224 GPS2Q13227 327 aa21.93■■□□□ 1.1
PACS1-205ENST00000527224 TMEM132EQ6IEE7 984 aa21.93■■□□□ 1.1
PACS1-205ENST00000527224 TFIP11Q9UBB9 837 aaKnown RBP21.93■■□□□ 1.1
PACS1-205ENST00000527224 MTMR6Q9Y217 621 aa21.93■■□□□ 1.1
PACS1-205ENST00000527224 CCZ1BP86790 482 aa21.93■■□□□ 1.1
PACS1-205ENST00000527224 CCZ1P86791 482 aaPredicted RBP21.93■■□□□ 1.1
PACS1-205ENST00000527224 TSGA10IPQ3SY00 556 aa21.93■■□□□ 1.1
PACS1-205ENST00000527224 CHMLP26374 656 aa21.92■■□□□ 1.1
PACS1-205ENST00000527224 SAFB2Q14151 953 aaKnown RBP eCLIP21.92■■□□□ 1.12e-6■□□□□ 11.3
PACS1-205ENST00000527224 FOXR1Q6PIV2 292 aa21.92■■□□□ 1.1
PACS1-205ENST00000527224 RUFY3Q7L099 469 aa21.92■■□□□ 1.1
PACS1-205ENST00000527224 API5Q9BZZ5 524 aaKnown RBP21.92■■□□□ 1.1
PACS1-205ENST00000527224 UNC13BO14795 1591 aa21.92■■□□□ 1.1
PACS1-205ENST00000527224 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.92■■□□□ 1.1
PACS1-205ENST00000527224 BRPF1P55201 1214 aaPredicted RBP21.91■■□□□ 1.1
PACS1-205ENST00000527224 BANK1Q8NDB2 785 aa21.91■■□□□ 1.1
PACS1-205ENST00000527224 CWC15Q9P013 229 aaKnown RBP21.91■■□□□ 1.1
PACS1-205ENST00000527224 ATP10DQ9P241 1426 aa21.91■■□□□ 1.1
PACS1-205ENST00000527224 GOLGA6L4A6NEF3 574 aa21.91■■□□□ 1.1
PACS1-205ENST00000527224 TTC31Q49AM3 519 aaPredicted RBP21.91■■□□□ 1.1
PACS1-205ENST00000527224 REXO1L1PQ8IX06 675 aa21.91■■□□□ 1.1
PACS1-205ENST00000527224 TDRD7Q8NHU6 1098 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 308.1 ms