RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 BCL9O00512 1426 aa25.92■■□□□ 1.74
SMCO4-203ENST00000526869 MEX3CQ5U5Q3 659 aaKnown RBP25.92■■□□□ 1.74
SMCO4-203ENST00000526869 DDX21Q9NR30 783 aaKnown RBP eCLIP25.92■■□□□ 1.74
SMCO4-203ENST00000526869 DOT1LQ8TEK3 1739 aa25.91■■□□□ 1.74
SMCO4-203ENST00000526869 ERBB4Q15303 1308 aa25.91■■□□□ 1.74
SMCO4-203ENST00000526869 RWDD1Q9H446 243 aaPredicted RBP25.91■■□□□ 1.74
SMCO4-203ENST00000526869 THSD7AQ9UPZ6 1657 aa25.9■■□□□ 1.74
SMCO4-203ENST00000526869 PRAMEF22A3QJZ6 481 aa25.89■■□□□ 1.74
SMCO4-203ENST00000526869 HDAC1Q13547 482 aaPredicted RBP25.89■■□□□ 1.74
SMCO4-203ENST00000526869 PIGBQ92521 554 aa25.88■■□□□ 1.73
SMCO4-203ENST00000526869 PHAXQ9H814 394 aaKnown RBP25.88■■□□□ 1.73
SMCO4-203ENST00000526869 IGHDP01880 384 aa25.87■■□□□ 1.73
SMCO4-203ENST00000526869 PDIA6Q15084 440 aa25.87■■□□□ 1.73
SMCO4-203ENST00000526869 ATRNO75882 1429 aa25.87■■□□□ 1.73
SMCO4-203ENST00000526869 ATP10DQ9P241 1426 aa25.87■■□□□ 1.73
SMCO4-203ENST00000526869 F6X3S4 739 aa25.86■■□□□ 1.73
SMCO4-203ENST00000526869 VSIG10Q8N0Z9 540 aa25.86■■□□□ 1.73
SMCO4-203ENST00000526869 AFF2P51816 1311 aa25.86■■□□□ 1.73
SMCO4-203ENST00000526869 MARCH10Q8NA82 808 aaPredicted RBP25.85■■□□□ 1.73
SMCO4-203ENST00000526869 FAM98CQ17RN3 349 aaKnown RBP25.84■■□□□ 1.73
SMCO4-203ENST00000526869 PROSER3Q2NL68 480 aa25.84■■□□□ 1.73
SMCO4-203ENST00000526869 ADCY9O60503 1353 aa25.83■■□□□ 1.73
SMCO4-203ENST00000526869 DDX58O95786 925 aaKnown RBP25.83■■□□□ 1.73
SMCO4-203ENST00000526869 SLC4A10Q6U841 1118 aa25.83■■□□□ 1.73
SMCO4-203ENST00000526869 ILDR2Q71H61 639 aa25.83■■□□□ 1.73
SMCO4-203ENST00000526869 TEX13AQ9BXU3 409 aaPredicted RBP25.83■■□□□ 1.73
SMCO4-203ENST00000526869 ATG3Q9NT62 314 aa25.83■■□□□ 1.73
SMCO4-203ENST00000526869 USP16Q9Y5T5 823 aa25.83■■□□□ 1.73
SMCO4-203ENST00000526869 IBTKQ9P2D0 1353 aaPredicted RBP25.82■■□□□ 1.72
SMCO4-203ENST00000526869 DNAAF4Q8WXU2 420 aa25.82■■□□□ 1.72
SMCO4-203ENST00000526869 ANXA1P04083 346 aa25.81■■□□□ 1.72
SMCO4-203ENST00000526869 KSR2Q6VAB6 950 aa25.81■■□□□ 1.72
SMCO4-203ENST00000526869 PI4KAP2A4QPH2 592 aa25.8■■□□□ 1.72
SMCO4-203ENST00000526869 LRP10Q7Z4F1 713 aa25.8■■□□□ 1.72
SMCO4-203ENST00000526869 PI4KAP1Q8N8J0 262 aa25.8■■□□□ 1.72
SMCO4-203ENST00000526869 GJD4Q96KN9 370 aaPredicted RBP25.8■■□□□ 1.72
SMCO4-203ENST00000526869 TRPC5Q9UL62 973 aaPredicted RBP25.8■■□□□ 1.72
SMCO4-203ENST00000526869 ASAP1Q9ULH1 1129 aa25.8■■□□□ 1.72
SMCO4-203ENST00000526869 CICQ96RK0 1608 aaPredicted RBP25.79■■□□□ 1.72
SMCO4-203ENST00000526869 GNAI3P08754 354 aa25.79■■□□□ 1.72
SMCO4-203ENST00000526869 PRIM1P49642 420 aaKnown RBP25.79■■□□□ 1.72
SMCO4-203ENST00000526869 PTCD1O75127 700 aaKnown RBP25.78■■□□□ 1.72
SMCO4-203ENST00000526869 MEIS3Q99687 375 aa25.78■■□□□ 1.72
SMCO4-203ENST00000526869 SRCIN1Q9C0H9 1055 aa25.78■■□□□ 1.72
SMCO4-203ENST00000526869 BEND3Q5T5X7 828 aa25.77■■□□□ 1.72
SMCO4-203ENST00000526869 RPAP2Q8IXW5 612 aaPredicted RBP25.77■■□□□ 1.72
SMCO4-203ENST00000526869 ONECUT3O60422 494 aaPredicted RBP25.76■■□□□ 1.71
SMCO4-203ENST00000526869 ALDH1L1O75891 902 aa25.76■■□□□ 1.71
SMCO4-203ENST00000526869 SMC5Q8IY18 1101 aa25.76■■□□□ 1.71
SMCO4-203ENST00000526869 ANKRD44Q8N8A2 993 aa25.75■■□□□ 1.71
SMCO4-203ENST00000526869 MAP3K2Q9Y2U5 619 aa25.75■■□□□ 1.71
SMCO4-203ENST00000526869 MYL6BP14649 208 aa25.74■■□□□ 1.71
SMCO4-203ENST00000526869 XAGE3Q8WTP9 111 aa25.74■■□□□ 1.71
SMCO4-203ENST00000526869 SYTL4Q96C24 671 aaPredicted RBP25.74■■□□□ 1.71
SMCO4-203ENST00000526869 C1orf115Q9H7X2 142 aa25.74■■□□□ 1.71
SMCO4-203ENST00000526869 GNAI2P04899 355 aa25.73■■□□□ 1.71
SMCO4-203ENST00000526869 COPS6Q7L5N1 327 aa25.73■■□□□ 1.71
SMCO4-203ENST00000526869 TJP1Q07157 1748 aa25.73■■□□□ 1.71
SMCO4-203ENST00000526869 ZNF831Q5JPB2 1677 aa25.72■■□□□ 1.71
SMCO4-203ENST00000526869 NBPF26B4DH59 902 aa25.72■■□□□ 1.71
SMCO4-203ENST00000526869 STARD3NLO95772 234 aa25.72■■□□□ 1.71
SMCO4-203ENST00000526869 NBPF14Q5TI25 921 aa25.72■■□□□ 1.71
SMCO4-203ENST00000526869 NBPF10Q6P3W6 841 aaKnown RBP25.72■■□□□ 1.71
SMCO4-203ENST00000526869 SIRT2Q8IXJ6 389 aa25.72■■□□□ 1.71
SMCO4-203ENST00000526869 NBPF15Q8N660 670 aa25.72■■□□□ 1.71
SMCO4-203ENST00000526869 LINS1Q8NG48 757 aa25.72■■□□□ 1.71
SMCO4-203ENST00000526869 GCC1Q96CN9 775 aa25.72■■□□□ 1.71
SMCO4-203ENST00000526869 CEP85Q6P2H3 762 aa25.71■■□□□ 1.71
SMCO4-203ENST00000526869 SMARCC1Q92922 1105 aaPredicted RBP25.71■■□□□ 1.71
SMCO4-203ENST00000526869 USP44Q9H0E7 712 aa25.71■■□□□ 1.71
SMCO4-203ENST00000526869 ARFGEF2Q9Y6D5 1785 aa25.7■■□□□ 1.7
SMCO4-203ENST00000526869 RIC3Q7Z5B4 369 aa25.7■■□□□ 1.7
SMCO4-203ENST00000526869 RBM42Q9BTD8 480 aaKnown RBP25.7■■□□□ 1.7
SMCO4-203ENST00000526869 NHSQ6T4R5 1651 aa25.7■■□□□ 1.7
SMCO4-203ENST00000526869 A0A0G2JS52 829 aa25.69■■□□□ 1.7
SMCO4-203ENST00000526869 MYT1Q01538 1121 aa25.69■■□□□ 1.7
SMCO4-203ENST00000526869 AIMP1Q12904 312 aaKnown RBP25.69■■□□□ 1.7
SMCO4-203ENST00000526869 ANKRD13DQ6ZTN6 518 aa25.69■■□□□ 1.7
SMCO4-203ENST00000526869 DNAJC10Q8IXB1 793 aa25.69■■□□□ 1.7
SMCO4-203ENST00000526869 PLBD2Q8NHP8 589 aa25.69■■□□□ 1.7
SMCO4-203ENST00000526869 HMMRO75330 724 aa25.68■■□□□ 1.7
SMCO4-203ENST00000526869 UBTFL1P0CB47 393 aaPredicted RBP25.68■■□□□ 1.7
SMCO4-203ENST00000526869 ACSBG1Q96GR2 724 aa25.68■■□□□ 1.7
SMCO4-203ENST00000526869 METTL22Q9BUU2 404 aaPredicted RBP25.68■■□□□ 1.7
SMCO4-203ENST00000526869 PDZRN3Q9UPQ7 1066 aa25.68■■□□□ 1.7
SMCO4-203ENST00000526869 HDAC5Q9UQL6 1122 aa25.68■■□□□ 1.7
SMCO4-203ENST00000526869 NUP188Q5SRE5 1749 aa25.68■■□□□ 1.7
SMCO4-203ENST00000526869 A1BGP04217 495 aa25.67■■□□□ 1.7
SMCO4-203ENST00000526869 NEXNQ0ZGT2 675 aa25.67■■□□□ 1.7
SMCO4-203ENST00000526869 SLC4A9Q96Q91 983 aa25.67■■□□□ 1.7
SMCO4-203ENST00000526869 KAT6BQ8WYB5 2073 aa25.67■■□□□ 1.7
SMCO4-203ENST00000526869 QTRT2Q9H974 415 aaKnown RBP25.66■■□□□ 1.7
SMCO4-203ENST00000526869 RREB1Q92766 1687 aa25.66■■□□□ 1.7
SMCO4-203ENST00000526869 UTYO14607 1347 aa25.65■■□□□ 1.7
SMCO4-203ENST00000526869 CYP19A1P11511 503 aaPredicted RBP25.65■■□□□ 1.7
SMCO4-203ENST00000526869 PIP4K2AP48426 406 aaPredicted RBP25.64■■□□□ 1.7
SMCO4-203ENST00000526869 DCTPP1Q9H773 170 aa25.64■■□□□ 1.7
SMCO4-203ENST00000526869 PALLDQ8WX93 1383 aa25.64■■□□□ 1.69
SMCO4-203ENST00000526869 NUCB1Q02818 461 aa25.63■■□□□ 1.69
SMCO4-203ENST00000526869 TSHZ2Q9NRE2 1034 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms