RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 POLMQ9NP87 494 aaPredicted RBP9.01□□□□□ -0.97
ATPAF1-208ENST00000526821 TRAPPC8Q9Y2L5 1435 aa9□□□□□ -0.97
ATPAF1-208ENST00000526821 RAD21O60216 631 aa9□□□□□ -0.97
ATPAF1-208ENST00000526821 NFX1Q12986 1120 aaKnown RBP9□□□□□ -0.97
ATPAF1-208ENST00000526821 CC2D2BQ6DHV5 1058 aa9□□□□□ -0.97
ATPAF1-208ENST00000526821 IRF7Q92985 503 aa9□□□□□ -0.97
ATPAF1-208ENST00000526821 AGBL1Q96MI9 1066 aa9□□□□□ -0.97
ATPAF1-208ENST00000526821 GDPD2Q9HCC8 539 aa9□□□□□ -0.97
ATPAF1-208ENST00000526821 PCDHB11Q9Y5F2 797 aa9□□□□□ -0.97
ATPAF1-208ENST00000526821 PLXNC1O60486 1568 aa8.99□□□□□ -0.97
ATPAF1-208ENST00000526821 GPR37L1O60883 481 aa8.99□□□□□ -0.97
ATPAF1-208ENST00000526821 DENND4BO75064 1496 aaPredicted RBP8.99□□□□□ -0.97
ATPAF1-208ENST00000526821 DIP2BQ9P265 1576 aa8.99□□□□□ -0.97
ATPAF1-208ENST00000526821 MAP3K4Q9Y6R4 1608 aa8.98□□□□□ -0.97
ATPAF1-208ENST00000526821 RTEL1-TNFRSF6BF6WH68 1400 aa8.98□□□□□ -0.97
ATPAF1-208ENST00000526821 ANKRD50Q9ULJ7 1429 aa8.98□□□□□ -0.97
ATPAF1-208ENST00000526821 ADGRL1O94910 1474 aa8.98□□□□□ -0.97
ATPAF1-208ENST00000526821 NEO1Q92859 1461 aa8.98□□□□□ -0.97
ATPAF1-208ENST00000526821 SOBPA7XYQ1 873 aa8.98□□□□□ -0.97
ATPAF1-208ENST00000526821 ATP5J2-PTCD1G3V325 749 aa8.98□□□□□ -0.97
ATPAF1-208ENST00000526821 LILRA1O75019 489 aa8.98□□□□□ -0.97
ATPAF1-208ENST00000526821 PTGIRP43119 386 aa8.98□□□□□ -0.97
ATPAF1-208ENST00000526821 SLFNL1Q499Z3 407 aa8.98□□□□□ -0.97
ATPAF1-208ENST00000526821 CYP2U1Q7Z449 544 aa8.98□□□□□ -0.97
ATPAF1-208ENST00000526821 CFAP74Q9C0B2 1584 aa8.98□□□□□ -0.97
ATPAF1-208ENST00000526821 KIF15Q9NS87 1388 aa8.98□□□□□ -0.97
ATPAF1-208ENST00000526821 SCAPERQ9BY12 1400 aa8.97□□□□□ -0.97
ATPAF1-208ENST00000526821 MYCP01106 439 aaPredicted RBP8.97□□□□□ -0.97
ATPAF1-208ENST00000526821 SOX11P35716 441 aa8.97□□□□□ -0.97
ATPAF1-208ENST00000526821 INSM2Q96T92 566 aaPredicted RBP8.97□□□□□ -0.97
ATPAF1-208ENST00000526821 ZNF395Q9H8N7 513 aaPredicted RBP8.97□□□□□ -0.97
ATPAF1-208ENST00000526821 CEP126Q9P2H0 1117 aa8.97□□□□□ -0.97
ATPAF1-208ENST00000526821 DNMT3LQ9UJW3 386 aa8.97□□□□□ -0.97
ATPAF1-208ENST00000526821 ZFYVE16Q7Z3T8 1539 aa8.96□□□□□ -0.97
ATPAF1-208ENST00000526821 FIGNL2A6NMB9 653 aa8.96□□□□□ -0.98
ATPAF1-208ENST00000526821 H3BM21 787 aa8.96□□□□□ -0.98
ATPAF1-208ENST00000526821 ERVK-9P63128 1117 aa8.96□□□□□ -0.98
ATPAF1-208ENST00000526821 SEMA3FQ13275 785 aa8.96□□□□□ -0.98
ATPAF1-208ENST00000526821 AFAP1Q8N556 730 aa8.96□□□□□ -0.98
ATPAF1-208ENST00000526821 KDM5DQ9BY66 1539 aa8.95□□□□□ -0.98
ATPAF1-208ENST00000526821 INO80Q9ULG1 1556 aaPredicted RBP8.95□□□□□ -0.98
ATPAF1-208ENST00000526821 ADD1P35611 737 aaKnown RBP8.95□□□□□ -0.98
ATPAF1-208ENST00000526821 VAC14Q08AM6 782 aa8.95□□□□□ -0.98
ATPAF1-208ENST00000526821 IRF5Q13568 498 aa8.95□□□□□ -0.98
ATPAF1-208ENST00000526821 POGZQ7Z3K3 1410 aa8.95□□□□□ -0.98
ATPAF1-208ENST00000526821 PZPP20742 1482 aa8.95□□□□□ -0.98
ATPAF1-208ENST00000526821 DUOX2Q9NRD8 1548 aa8.95□□□□□ -0.98
ATPAF1-208ENST00000526821 KDM5CP41229 1560 aa8.95□□□□□ -0.98
ATPAF1-208ENST00000526821 CTSOP43234 321 aaPredicted RBP8.94□□□□□ -0.98
ATPAF1-208ENST00000526821 INSM1Q01101 510 aaPredicted RBP8.94□□□□□ -0.98
ATPAF1-208ENST00000526821 RNF135Q8IUD6 432 aa8.94□□□□□ -0.98
ATPAF1-208ENST00000526821 SIRT1Q96EB6 747 aa8.94□□□□□ -0.98
ATPAF1-208ENST00000526821 NLRP3Q96P20 1036 aa8.94□□□□□ -0.98
ATPAF1-208ENST00000526821 MPHOSPH9Q99550 1183 aa8.94□□□□□ -0.98
ATPAF1-208ENST00000526821 SPAG9O60271 1321 aaKnown RBP8.94□□□□□ -0.98
ATPAF1-208ENST00000526821 ERBINQ96RT1 1412 aa8.94□□□□□ -0.98
ATPAF1-208ENST00000526821 ZNF518AQ6AHZ1 1483 aa8.94□□□□□ -0.98
ATPAF1-208ENST00000526821 VEGFBP49765 207 aa8.93□□□□□ -0.98
ATPAF1-208ENST00000526821 FAM69CQ0P6D2 419 aa8.93□□□□□ -0.98
ATPAF1-208ENST00000526821 LCE2AQ5TA79 106 aaPredicted RBP8.93□□□□□ -0.98
ATPAF1-208ENST00000526821 DOLKQ9UPQ8 538 aa8.93□□□□□ -0.98
ATPAF1-208ENST00000526821 COG6Q9Y2V7 657 aa8.93□□□□□ -0.98
ATPAF1-208ENST00000526821 ATP7AQ04656 1500 aa8.93□□□□□ -0.98
ATPAF1-208ENST00000526821 PPRC1Q5VV67 1664 aaKnown RBP8.92□□□□□ -0.98
ATPAF1-208ENST00000526821 UNC13BO14795 1591 aa8.92□□□□□ -0.98
ATPAF1-208ENST00000526821 MAGI2Q86UL8 1455 aa8.92□□□□□ -0.98
ATPAF1-208ENST00000526821 MLH3Q9UHC1 1453 aa8.92□□□□□ -0.98
ATPAF1-208ENST00000526821 MEN1O00255 615 aa8.92□□□□□ -0.98
ATPAF1-208ENST00000526821 PTSQ03393 145 aa8.92□□□□□ -0.98
ATPAF1-208ENST00000526821 RNF217Q8TC41 542 aa8.92□□□□□ -0.98
ATPAF1-208ENST00000526821 WIPF1O43516 503 aa8.91□□□□□ -0.98
ATPAF1-208ENST00000526821 PPFIA3O75145 1194 aa8.91□□□□□ -0.98
ATPAF1-208ENST00000526821 GPC1P35052 558 aa8.91□□□□□ -0.98
ATPAF1-208ENST00000526821 USP4Q13107 963 aa8.91□□□□□ -0.98
ATPAF1-208ENST00000526821 LYSMD3Q7Z3D4 306 aa8.91□□□□□ -0.98
ATPAF1-208ENST00000526821 TIMELESSQ9UNS1 1208 aa8.91□□□□□ -0.98
ATPAF1-208ENST00000526821 KIDINS220Q9ULH0 1771 aa8.91□□□□□ -0.98
ATPAF1-208ENST00000526821 ANKRD30BQ9BXX2 1392 aa8.9□□□□□ -0.98
ATPAF1-208ENST00000526821 KIF13AQ9H1H9 1805 aa8.9□□□□□ -0.98
ATPAF1-208ENST00000526821 SIN3AQ96ST3 1273 aa8.9□□□□□ -0.98
ATPAF1-208ENST00000526821 TEX14Q8IWB6 1497 aa8.89□□□□□ -0.99
ATPAF1-208ENST00000526821 NUP155O75694 1391 aa8.89□□□□□ -0.99
ATPAF1-208ENST00000526821 DHX29Q7Z478 1369 aaKnown RBP8.89□□□□□ -0.99
ATPAF1-208ENST00000526821 A0A1W2PRU2 124 aa8.89□□□□□ -0.99
ATPAF1-208ENST00000526821 GNRH1P01148 92 aa8.89□□□□□ -0.99
ATPAF1-208ENST00000526821 GTF2E1P29083 439 aaPredicted RBP8.89□□□□□ -0.99
ATPAF1-208ENST00000526821 RNF144AP50876 292 aaPredicted RBP8.89□□□□□ -0.99
ATPAF1-208ENST00000526821 SLC27A3Q5K4L6 730 aa8.89□□□□□ -0.99
ATPAF1-208ENST00000526821 RICTORQ6R327 1708 aa8.88□□□□□ -0.99
ATPAF1-208ENST00000526821 EIF2AK4Q9P2K8 1649 aaKnown RBP8.88□□□□□ -0.99
ATPAF1-208ENST00000526821 FRMPD1Q5SYB0 1578 aa8.88□□□□□ -0.99
ATPAF1-208ENST00000526821 HECW2Q9P2P5 1572 aa8.88□□□□□ -0.99
ATPAF1-208ENST00000526821 SCTRP47872 440 aa8.88□□□□□ -0.99
ATPAF1-208ENST00000526821 MAP7D1Q3KQU3 841 aa8.88□□□□□ -0.99
ATPAF1-208ENST00000526821 ESCO1Q5FWF5 840 aa8.88□□□□□ -0.99
ATPAF1-208ENST00000526821 FOXD4L5Q5VV16 416 aaPredicted RBP8.88□□□□□ -0.99
ATPAF1-208ENST00000526821 CCDC85AQ96PX6 553 aaPredicted RBP8.88□□□□□ -0.99
ATPAF1-208ENST00000526821 OSBPL3Q9H4L5 887 aa8.88□□□□□ -0.99
ATPAF1-208ENST00000526821 FAM135AQ9P2D6 1515 aa8.88□□□□□ -0.99
ATPAF1-208ENST00000526821 DEPDC5O75140 1603 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms