RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 CHD2O14647 1828 aaKnown RBP14.19□□□□□ -0.14
LINC01001-201ENST00000526704 PRIM1P49642 420 aaKnown RBP14.19□□□□□ -0.14
LINC01001-201ENST00000526704 POLA2Q14181 598 aa14.19□□□□□ -0.14
LINC01001-201ENST00000526704 ANP32BQ92688 251 aaKnown RBP14.19□□□□□ -0.14
LINC01001-201ENST00000526704 NOL8Q76FK4 1167 aaKnown RBP14.18□□□□□ -0.14
LINC01001-201ENST00000526704 ABTB2Q8N961 1025 aa14.18□□□□□ -0.14
LINC01001-201ENST00000526704 INTS4Q96HW7 963 aaKnown RBP14.18□□□□□ -0.14
LINC01001-201ENST00000526704 KCNA6P17658 529 aa14.18□□□□□ -0.14
LINC01001-201ENST00000526704 PPP1R42Q7Z4L9 355 aa14.18□□□□□ -0.14
LINC01001-201ENST00000526704 NUTM1Q86Y26 1132 aa14.18□□□□□ -0.14
LINC01001-201ENST00000526704 PLPPR3Q6T4P5 718 aa14.17□□□□□ -0.14
LINC01001-201ENST00000526704 ZSCAN30Q86W11 494 aa14.17□□□□□ -0.14
LINC01001-201ENST00000526704 PI4K2BQ8TCG2 481 aa14.17□□□□□ -0.14
LINC01001-201ENST00000526704 UPF3BQ9BZI7 483 aaKnown RBP14.17□□□□□ -0.14
LINC01001-201ENST00000526704 RAB11FIP3O75154 756 aa14.16□□□□□ -0.14
LINC01001-201ENST00000526704 PDLIM2Q96JY6 352 aa14.16□□□□□ -0.14
LINC01001-201ENST00000526704 EPB41L2O43491 1005 aaKnown RBP14.16□□□□□ -0.14
LINC01001-201ENST00000526704 HSPA4P34932 840 aa14.16□□□□□ -0.14
LINC01001-201ENST00000526704 LRSAM1Q6UWE0 723 aa14.16□□□□□ -0.14
LINC01001-201ENST00000526704 THEMISQ8N1K5 641 aaPredicted RBP14.16□□□□□ -0.14
LINC01001-201ENST00000526704 SIPA1L3O60292 1781 aaPredicted RBP14.15□□□□□ -0.14
LINC01001-201ENST00000526704 SYCE3A1L190 88 aa14.15□□□□□ -0.14
LINC01001-201ENST00000526704 SURF6O75683 361 aaKnown RBP14.15□□□□□ -0.14
LINC01001-201ENST00000526704 MAP4K4O95819 1239 aaPredicted RBP14.15□□□□□ -0.14
LINC01001-201ENST00000526704 MBD3O95983 291 aa14.15□□□□□ -0.14
LINC01001-201ENST00000526704 RHPN1Q8TCX5 695 aa14.15□□□□□ -0.14
LINC01001-201ENST00000526704 EIF4A1P60842 406 aaKnown RBP14.15□□□□□ -0.14
LINC01001-201ENST00000526704 RAD50Q92878 1312 aa14.15□□□□□ -0.14
LINC01001-201ENST00000526704 NBPF7P0C2Y1 421 aaPredicted RBP14.14□□□□□ -0.15
LINC01001-201ENST00000526704 CHPF2Q9P2E5 772 aa14.14□□□□□ -0.15
LINC01001-201ENST00000526704 SRGAP3O43295 1099 aa14.14□□□□□ -0.15
LINC01001-201ENST00000526704 EIF2S2P20042 333 aaKnown RBP14.14□□□□□ -0.15
LINC01001-201ENST00000526704 RPAP1Q9BWH6 1393 aaPredicted RBP14.13□□□□□ -0.15
LINC01001-201ENST00000526704 SGSM2O43147 1006 aa14.13□□□□□ -0.15
LINC01001-201ENST00000526704 BEND3Q5T5X7 828 aa14.13□□□□□ -0.15
LINC01001-201ENST00000526704 IP6K1Q92551 441 aa14.13□□□□□ -0.15
LINC01001-201ENST00000526704 LGR6Q9HBX8 967 aa14.13□□□□□ -0.15
LINC01001-201ENST00000526704 ADCY9O60503 1353 aa14.13□□□□□ -0.15
LINC01001-201ENST00000526704 HOXB7P09629 217 aa14.13□□□□□ -0.15
LINC01001-201ENST00000526704 HS1BP3Q53T59 392 aa14.13□□□□□ -0.15
LINC01001-201ENST00000526704 NBPF6Q5VWK0 638 aa14.13□□□□□ -0.15
LINC01001-201ENST00000526704 C14orf37Q86TY3 774 aa14.13□□□□□ -0.15
LINC01001-201ENST00000526704 KIF1BPQ96EK5 621 aa14.13□□□□□ -0.15
LINC01001-201ENST00000526704 NBPF4Q96M43 638 aa14.13□□□□□ -0.15
LINC01001-201ENST00000526704 KCNQ3O43525 872 aa14.12□□□□□ -0.15
LINC01001-201ENST00000526704 PLEKHG5O94827 1062 aa14.12□□□□□ -0.15
LINC01001-201ENST00000526704 DNAAF4Q8WXU2 420 aa14.12□□□□□ -0.15
LINC01001-201ENST00000526704 LSG1Q9H089 658 aaKnown RBP14.12□□□□□ -0.15
LINC01001-201ENST00000526704 PXDNQ92626 1479 aa14.12□□□□□ -0.15
LINC01001-201ENST00000526704 CAMTA1Q9Y6Y1 1673 aa14.12□□□□□ -0.15
LINC01001-201ENST00000526704 USP42Q9H9J4 1324 aaKnown RBP14.11□□□□□ -0.15
LINC01001-201ENST00000526704 PI4KAP2A4QPH2 592 aa14.11□□□□□ -0.15
LINC01001-201ENST00000526704 PI4KAP1Q8N8J0 262 aa14.11□□□□□ -0.15
LINC01001-201ENST00000526704 PHF8Q9UPP1 1060 aa14.11□□□□□ -0.15
LINC01001-201ENST00000526704 SNX14Q9Y5W7 946 aa14.11□□□□□ -0.15
LINC01001-201ENST00000526704 MSNP26038 577 aaKnown RBP14.11□□□□□ -0.15
LINC01001-201ENST00000526704 TTC14Q96N46 770 aa14.11□□□□□ -0.15
LINC01001-201ENST00000526704 ANXA1P04083 346 aa14.1□□□□□ -0.15
LINC01001-201ENST00000526704 CNTROBQ8N137 903 aa14.1□□□□□ -0.15
LINC01001-201ENST00000526704 WDR33Q9C0J8 1336 aaKnown RBP14.1□□□□□ -0.15
LINC01001-201ENST00000526704 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.1□□□□□ -0.15
LINC01001-201ENST00000526704 ADGRL3Q9HAR2 1447 aa14.09□□□□□ -0.15
LINC01001-201ENST00000526704 GADD45BO75293 160 aaPredicted RBP14.09□□□□□ -0.15
LINC01001-201ENST00000526704 NOL7Q9UMY1 257 aaKnown RBP14.09□□□□□ -0.15
LINC01001-201ENST00000526704 RASEFQ8IZ41 740 aa14.09□□□□□ -0.15
LINC01001-201ENST00000526704 GDPD2Q9HCC8 539 aa14.09□□□□□ -0.15
LINC01001-201ENST00000526704 NCAPD2Q15021 1401 aa14.08□□□□□ -0.15
LINC01001-201ENST00000526704 OFD1O75665 1012 aa14.08□□□□□ -0.16
LINC01001-201ENST00000526704 FOXD4L6Q3SYB3 417 aaPredicted RBP14.08□□□□□ -0.16
LINC01001-201ENST00000526704 FOXD4L3Q6VB84 417 aaPredicted RBP14.08□□□□□ -0.16
LINC01001-201ENST00000526704 ADAMTS7Q9UKP4 1686 aa14.08□□□□□ -0.16
LINC01001-201ENST00000526704 RGPD5Q99666 1765 aa14.08□□□□□ -0.16
LINC01001-201ENST00000526704 TTC41PQ6P2S7 1318 aa14.08□□□□□ -0.16
LINC01001-201ENST00000526704 MTX1Q13505 466 aa14.08□□□□□ -0.16
LINC01001-201ENST00000526704 HSP90AB4PQ58FF6 505 aa14.08□□□□□ -0.16
LINC01001-201ENST00000526704 ZNF530Q6P9A1 599 aaPredicted RBP14.08□□□□□ -0.16
LINC01001-201ENST00000526704 OVOS2A0A0G2JMS6 1433 aa14.07□□□□□ -0.16
LINC01001-201ENST00000526704 BTBD11A6QL63 1104 aa14.07□□□□□ -0.16
LINC01001-201ENST00000526704 AK2P54819 239 aa14.07□□□□□ -0.16
LINC01001-201ENST00000526704 AKAP4Q5JQC9 854 aa14.07□□□□□ -0.16
LINC01001-201ENST00000526704 CWC27Q6UX04 472 aaKnown RBP14.07□□□□□ -0.16
LINC01001-201ENST00000526704 RUFY3Q7L099 469 aa14.07□□□□□ -0.16
LINC01001-201ENST00000526704 USP48Q86UV5 1035 aa14.07□□□□□ -0.16
LINC01001-201ENST00000526704 LRRC59Q96AG4 307 aaKnown RBP14.07□□□□□ -0.16
LINC01001-201ENST00000526704 C5P01031 1676 aa14.07□□□□□ -0.16
LINC01001-201ENST00000526704 ZNF142P52746 1687 aaPredicted RBP14.07□□□□□ -0.16
LINC01001-201ENST00000526704 TPM2P07951 284 aa14.07□□□□□ -0.16
LINC01001-201ENST00000526704 TEFQ10587 303 aa14.07□□□□□ -0.16
LINC01001-201ENST00000526704 KIAA1211Q6ZU35 1233 aa14.07□□□□□ -0.16
LINC01001-201ENST00000526704 TMEM87AQ8NBN3 555 aa14.07□□□□□ -0.16
LINC01001-201ENST00000526704 RNF214Q8ND24 703 aa14.07□□□□□ -0.16
LINC01001-201ENST00000526704 TSPY26PQ9H489 355 aa14.07□□□□□ -0.16
LINC01001-201ENST00000526704 SPG7Q9UQ90 795 aa14.07□□□□□ -0.16
LINC01001-201ENST00000526704 SLIT3O75094 1523 aa14.07□□□□□ -0.16
LINC01001-201ENST00000526704 MPRIPQ6WCQ1 1025 aa14.06□□□□□ -0.16
LINC01001-201ENST00000526704 SYAP1Q96A49 352 aaPredicted RBP14.06□□□□□ -0.16
LINC01001-201ENST00000526704 ZBTB7CA1YPR0 619 aa14.06□□□□□ -0.16
LINC01001-201ENST00000526704 ZNF500O60304 480 aaPredicted RBP14.06□□□□□ -0.16
LINC01001-201ENST00000526704 GLRX3O76003 335 aaKnown RBP14.06□□□□□ -0.16
LINC01001-201ENST00000526704 CHMP4AQ9BY43 222 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms