RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 ADCY9O60503 1353 aa24.9■■□□□ 1.58
SMIM3-201ENST00000526627 BTBD11A6QL63 1104 aa24.9■■□□□ 1.58
SMIM3-201ENST00000526627 GCP02774 474 aa24.9■■□□□ 1.58
SMIM3-201ENST00000526627 NEK4P51957 841 aa24.9■■□□□ 1.58
SMIM3-201ENST00000526627 NUTM1Q86Y26 1132 aa24.9■■□□□ 1.58
SMIM3-201ENST00000526627 ORAI2Q96SN7 254 aa24.9■■□□□ 1.58
SMIM3-201ENST00000526627 SURF6O75683 361 aaKnown RBP24.89■■□□□ 1.58
SMIM3-201ENST00000526627 ANXA1P04083 346 aa24.89■■□□□ 1.58
SMIM3-201ENST00000526627 IL25Q9H293 177 aa24.89■■□□□ 1.58
SMIM3-201ENST00000526627 TEFQ10587 303 aa24.89■■□□□ 1.57
SMIM3-201ENST00000526627 RHPN1Q8TCX5 695 aa24.89■■□□□ 1.57
SMIM3-201ENST00000526627 RNMTO43148 476 aaKnown RBP24.88■■□□□ 1.57
SMIM3-201ENST00000526627 ANAPC15P60006 121 aa24.88■■□□□ 1.57
SMIM3-201ENST00000526627 MCTP1Q6DN14 999 aa24.88■■□□□ 1.57
SMIM3-201ENST00000526627 PI4K2BQ8TCG2 481 aa24.88■■□□□ 1.57
SMIM3-201ENST00000526627 TMX3Q96JJ7 454 aa24.88■■□□□ 1.57
SMIM3-201ENST00000526627 ANO2Q9NQ90 1003 aa24.87■■□□□ 1.57
SMIM3-201ENST00000526627 LMBRD1Q9NUN5 540 aa24.87■■□□□ 1.57
SMIM3-201ENST00000526627 SRGAP3O43295 1099 aa24.87■■□□□ 1.57
SMIM3-201ENST00000526627 XPCQ01831 940 aaPredicted RBP24.87■■□□□ 1.57
SMIM3-201ENST00000526627 AMOTQ4VCS5 1084 aa24.87■■□□□ 1.57
SMIM3-201ENST00000526627 DDX49Q9Y6V7 483 aaKnown RBP24.87■■□□□ 1.57
SMIM3-201ENST00000526627 CAMTA1Q9Y6Y1 1673 aa24.86■■□□□ 1.57
SMIM3-201ENST00000526627 MCCP23508 829 aa24.85■■□□□ 1.57
SMIM3-201ENST00000526627 CHMP4AQ9BY43 222 aa24.85■■□□□ 1.57
SMIM3-201ENST00000526627 OVOS2A0A0G2JMS6 1433 aa24.85■■□□□ 1.57
SMIM3-201ENST00000526627 HEG1Q9ULI3 1381 aa24.85■■□□□ 1.57
SMIM3-201ENST00000526627 TRHP20396 242 aaPredicted RBP24.85■■□□□ 1.57
SMIM3-201ENST00000526627 CUL4AQ13619 759 aa24.85■■□□□ 1.57
SMIM3-201ENST00000526627 KIF1BPQ96EK5 621 aa24.85■■□□□ 1.57
SMIM3-201ENST00000526627 NPHP4O75161 1426 aaPredicted RBP24.84■■□□□ 1.57
SMIM3-201ENST00000526627 MCM2P49736 904 aa24.84■■□□□ 1.57
SMIM3-201ENST00000526627 TRPM3Q9HCF6 1732 aaPredicted RBP24.83■■□□□ 1.57
SMIM3-201ENST00000526627 ANKRD24Q8TF21 1146 aa24.83■■□□□ 1.57
SMIM3-201ENST00000526627 ANO8Q9HCE9 1232 aaPredicted RBP24.83■■□□□ 1.56
SMIM3-201ENST00000526627 DBF4Q9UBU7 674 aaPredicted RBP24.83■■□□□ 1.56
SMIM3-201ENST00000526627 EPB41L2O43491 1005 aaKnown RBP24.82■■□□□ 1.56
SMIM3-201ENST00000526627 GIGYF1O75420 1035 aaPredicted RBP24.82■■□□□ 1.56
SMIM3-201ENST00000526627 PROSER3Q2NL68 480 aa24.82■■□□□ 1.56
SMIM3-201ENST00000526627 AXIN2Q9Y2T1 843 aa24.82■■□□□ 1.56
SMIM3-201ENST00000526627 ADAMTSL3P82987 1691 aa24.82■■□□□ 1.56
SMIM3-201ENST00000526627 MAP4K4O95819 1239 aaPredicted RBP24.81■■□□□ 1.56
SMIM3-201ENST00000526627 C1orf141Q5JVX7 400 aa24.81■■□□□ 1.56
SMIM3-201ENST00000526627 SIPA1L3O60292 1781 aaPredicted RBP24.81■■□□□ 1.56
SMIM3-201ENST00000526627 CRYBG1Q9Y4K1 1723 aa24.81■■□□□ 1.56
SMIM3-201ENST00000526627 MTX1Q13505 466 aa24.8■■□□□ 1.56
SMIM3-201ENST00000526627 PLEKHG5O94827 1062 aa24.8■■□□□ 1.56
SMIM3-201ENST00000526627 HSPA4P34932 840 aa24.8■■□□□ 1.56
SMIM3-201ENST00000526627 USP42Q9H9J4 1324 aaKnown RBP24.8■■□□□ 1.56
SMIM3-201ENST00000526627 PRAMEF22A3QJZ6 481 aa24.79■■□□□ 1.56
SMIM3-201ENST00000526627 CHAMP1Q96JM3 812 aa24.79■■□□□ 1.56
SMIM3-201ENST00000526627 MAP3K2Q9Y2U5 619 aa24.79■■□□□ 1.56
SMIM3-201ENST00000526627 ADAMTS7Q9UKP4 1686 aa24.79■■□□□ 1.56
SMIM3-201ENST00000526627 SGSM2O43147 1006 aa24.78■■□□□ 1.56
SMIM3-201ENST00000526627 ZNF445P59923 1031 aa24.78■■□□□ 1.56
SMIM3-201ENST00000526627 ALDH1L1O75891 902 aa24.77■■□□□ 1.56
SMIM3-201ENST00000526627 HSP90AB4PQ58FF6 505 aa24.77■■□□□ 1.56
SMIM3-201ENST00000526627 INTS4Q96HW7 963 aaKnown RBP24.77■■□□□ 1.56
SMIM3-201ENST00000526627 UPF3BQ9BZI7 483 aaKnown RBP24.77■■□□□ 1.56
SMIM3-201ENST00000526627 LMTK3Q96Q04 1460 aa24.77■■□□□ 1.56
SMIM3-201ENST00000526627 KSR2Q6VAB6 950 aa24.77■■□□□ 1.56
SMIM3-201ENST00000526627 PRPF40AO75400 957 aaKnown RBP24.76■■□□□ 1.55
SMIM3-201ENST00000526627 BRD1O95696 1058 aa24.76■■□□□ 1.55
SMIM3-201ENST00000526627 GPT2Q8TD30 523 aa24.76■■□□□ 1.55
SMIM3-201ENST00000526627 RGPD5Q99666 1765 aa24.76■■□□□ 1.55
SMIM3-201ENST00000526627 CAVIN1Q6NZI2 390 aaKnown RBP24.75■■□□□ 1.55
SMIM3-201ENST00000526627 LMOD2Q6P5Q4 547 aa24.75■■□□□ 1.55
SMIM3-201ENST00000526627 RAD50Q92878 1312 aa24.75■■□□□ 1.55
SMIM3-201ENST00000526627 KRT28Q7Z3Y7 464 aa24.75■■□□□ 1.55
SMIM3-201ENST00000526627 ZSCAN23Q3MJ62 389 aa24.74■■□□□ 1.55
SMIM3-201ENST00000526627 NOL8Q76FK4 1167 aaKnown RBP24.74■■□□□ 1.55
SMIM3-201ENST00000526627 CNTROBQ8N137 903 aa24.74■■□□□ 1.55
SMIM3-201ENST00000526627 LSG1Q9H089 658 aaKnown RBP24.74■■□□□ 1.55
SMIM3-201ENST00000526627 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.73■■□□□ 1.55
SMIM3-201ENST00000526627 MST1RQ04912 1400 aa24.73■■□□□ 1.55
SMIM3-201ENST00000526627 TTC41PQ6P2S7 1318 aa24.73■■□□□ 1.55
SMIM3-201ENST00000526627 CWF19L2Q2TBE0 894 aaKnown RBP24.73■■□□□ 1.55
SMIM3-201ENST00000526627 FOXD4L5Q5VV16 416 aaPredicted RBP24.72■■□□□ 1.55
SMIM3-201ENST00000526627 FOXD4L4Q8WXT5 416 aaPredicted RBP24.72■■□□□ 1.55
SMIM3-201ENST00000526627 C9orf78Q9NZ63 289 aaPredicted RBP24.72■■□□□ 1.55
SMIM3-201ENST00000526627 C1orf167Q5SNV9 1468 aa24.72■■□□□ 1.55
SMIM3-201ENST00000526627 NCLP19338 710 aaKnown RBP24.72■■□□□ 1.55
SMIM3-201ENST00000526627 HYPKQ9NX55 129 aa24.71■■□□□ 1.55
SMIM3-201ENST00000526627 SNX14Q9Y5W7 946 aa24.71■■□□□ 1.55
SMIM3-201ENST00000526627 ERBB3P21860 1342 aa24.71■■□□□ 1.55
SMIM3-201ENST00000526627 GLRX3O76003 335 aaKnown RBP24.7■■□□□ 1.55
SMIM3-201ENST00000526627 CLCN1P35523 988 aa24.7■■□□□ 1.55
SMIM3-201ENST00000526627 PDIA6Q15084 440 aa24.7■■□□□ 1.55
SMIM3-201ENST00000526627 KAZALD1Q96I82 304 aa24.7■■□□□ 1.55
SMIM3-201ENST00000526627 PA2G4Q9UQ80 394 aaKnown RBP24.7■■□□□ 1.55
SMIM3-201ENST00000526627 KIF1AQ12756 1690 aa24.7■■□□□ 1.55
SMIM3-201ENST00000526627 NASPP49321 788 aaPredicted RBP24.7■■□□□ 1.54
SMIM3-201ENST00000526627 OS9Q13438 667 aaPredicted RBP24.7■■□□□ 1.54
SMIM3-201ENST00000526627 UTYO14607 1347 aa24.7■■□□□ 1.54
SMIM3-201ENST00000526627 ERBB4Q15303 1308 aa24.7■■□□□ 1.54
SMIM3-201ENST00000526627 RBM27Q9P2N5 1060 aaKnown RBP24.69■■□□□ 1.54
SMIM3-201ENST00000526627 ALS2Q96Q42 1657 aa24.69■■□□□ 1.54
SMIM3-201ENST00000526627 RASEFQ8IZ41 740 aa24.69■■□□□ 1.54
SMIM3-201ENST00000526627 DDX21Q9NR30 783 aaKnown RBP eCLIP24.69■■□□□ 1.54
SMIM3-201ENST00000526627 NSFL1CQ9UNZ2 370 aaKnown RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms