RNA–Protein interactions for RNA: ENST00000526493.1

UBASH3B-204, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 3

Gene UBASH3B, Length 1,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-204ENST00000526493 FMNL2Q96PY5 1086 aa16.54■□□□□ 0.24
UBASH3B-204ENST00000526493 CCDC9Q9Y3X0 531 aaKnown RBP16.54■□□□□ 0.24
UBASH3B-204ENST00000526493 PHAXQ9H814 394 aaKnown RBP16.53■□□□□ 0.24
UBASH3B-204ENST00000526493 PXDNLA1KZ92 1463 aa16.53■□□□□ 0.24
UBASH3B-204ENST00000526493 THSD7AQ9UPZ6 1657 aa16.53■□□□□ 0.24
UBASH3B-204ENST00000526493 F6X3S4 739 aa16.52■□□□□ 0.24
UBASH3B-204ENST00000526493 DDB1Q16531 1140 aa16.52■□□□□ 0.24
UBASH3B-204ENST00000526493 DBF4Q9UBU7 674 aaPredicted RBP16.52■□□□□ 0.24
UBASH3B-204ENST00000526493 ANXA1P04083 346 aa16.51■□□□□ 0.23
UBASH3B-204ENST00000526493 SNRPA1P09661 255 aaKnown RBP16.51■□□□□ 0.23
UBASH3B-204ENST00000526493 FKBP5Q13451 457 aaPredicted RBP16.51■□□□□ 0.23
UBASH3B-204ENST00000526493 PROSER3Q2NL68 480 aa16.51■□□□□ 0.23
UBASH3B-204ENST00000526493 CHMP4BQ9H444 224 aaKnown RBP16.51■□□□□ 0.23
UBASH3B-204ENST00000526493 TMOD3Q9NYL9 352 aa16.51■□□□□ 0.23
UBASH3B-204ENST00000526493 USP21Q9UK80 565 aa16.51■□□□□ 0.23
UBASH3B-204ENST00000526493 PIGBQ92521 554 aa16.5■□□□□ 0.23
UBASH3B-204ENST00000526493 DDX21Q9NR30 783 aaKnown RBP eCLIP16.5■□□□□ 0.23
UBASH3B-204ENST00000526493 BCL9O00512 1426 aa16.5■□□□□ 0.23
UBASH3B-204ENST00000526493 CCT4P50991 539 aaKnown RBP16.49■□□□□ 0.23
UBASH3B-204ENST00000526493 PDIA6Q15084 440 aa16.49■□□□□ 0.23
UBASH3B-204ENST00000526493 MEX3CQ5U5Q3 659 aaKnown RBP16.49■□□□□ 0.23
UBASH3B-204ENST00000526493 MARCH10Q8NA82 808 aaPredicted RBP16.49■□□□□ 0.23
UBASH3B-204ENST00000526493 USP16Q9Y5T5 823 aa16.49■□□□□ 0.23
UBASH3B-204ENST00000526493 FAM98CQ17RN3 349 aaKnown RBP16.48■□□□□ 0.23
UBASH3B-204ENST00000526493 SLC4A10Q6U841 1118 aa16.48■□□□□ 0.23
UBASH3B-204ENST00000526493 HYPKQ9NX55 129 aa16.48■□□□□ 0.23
UBASH3B-204ENST00000526493 AFF2P51816 1311 aa16.47■□□□□ 0.23
UBASH3B-204ENST00000526493 ARFGEF2Q9Y6D5 1785 aa16.47■□□□□ 0.23
UBASH3B-204ENST00000526493 HDAC1Q13547 482 aaPredicted RBP16.47■□□□□ 0.23
UBASH3B-204ENST00000526493 RWDD1Q9H446 243 aaPredicted RBP16.47■□□□□ 0.23
UBASH3B-204ENST00000526493 ATG3Q9NT62 314 aa16.47■□□□□ 0.23
UBASH3B-204ENST00000526493 ASAP1Q9ULH1 1129 aa16.47■□□□□ 0.23
UBASH3B-204ENST00000526493 ADCY9O60503 1353 aa16.47■□□□□ 0.23
UBASH3B-204ENST00000526493 TJP1Q07157 1748 aa16.47■□□□□ 0.23
UBASH3B-204ENST00000526493 ATRNO75882 1429 aa16.46■□□□□ 0.23
UBASH3B-204ENST00000526493 NUP188Q5SRE5 1749 aa16.45■□□□□ 0.22
UBASH3B-204ENST00000526493 AFDNP55196 1824 aaKnown RBP16.45■□□□□ 0.22
UBASH3B-204ENST00000526493 PTCD1O75127 700 aaKnown RBP16.45■□□□□ 0.22
UBASH3B-204ENST00000526493 LRP10Q7Z4F1 713 aa16.45■□□□□ 0.22
UBASH3B-204ENST00000526493 MEIS3Q99687 375 aa16.45■□□□□ 0.22
UBASH3B-204ENST00000526493 C1orf115Q9H7X2 142 aa16.45■□□□□ 0.22
UBASH3B-204ENST00000526493 SBF2Q86WG5 1849 aa16.45■□□□□ 0.22
UBASH3B-204ENST00000526493 ATP10DQ9P241 1426 aa16.45■□□□□ 0.22
UBASH3B-204ENST00000526493 PI4KAP2A4QPH2 592 aa16.44■□□□□ 0.22
UBASH3B-204ENST00000526493 PRIM1P49642 420 aaKnown RBP16.44■□□□□ 0.22
UBASH3B-204ENST00000526493 CACNB1Q02641 598 aaPredicted RBP16.44■□□□□ 0.22
UBASH3B-204ENST00000526493 SKAP1Q86WV1 359 aa16.44■□□□□ 0.22
UBASH3B-204ENST00000526493 PI4KAP1Q8N8J0 262 aa16.44■□□□□ 0.22
UBASH3B-204ENST00000526493 ERBB4Q15303 1308 aa16.44■□□□□ 0.22
UBASH3B-204ENST00000526493 KSR2Q6VAB6 950 aa16.43■□□□□ 0.22
UBASH3B-204ENST00000526493 SIRT2Q8IXJ6 389 aa16.43■□□□□ 0.22
UBASH3B-204ENST00000526493 DNAAF4Q8WXU2 420 aa16.43■□□□□ 0.22
UBASH3B-204ENST00000526493 CICQ96RK0 1608 aaPredicted RBP16.43■□□□□ 0.22
UBASH3B-204ENST00000526493 MYL6BP14649 208 aa16.42■□□□□ 0.22
UBASH3B-204ENST00000526493 VSIG10Q8N0Z9 540 aa16.42■□□□□ 0.22
UBASH3B-204ENST00000526493 GJD4Q96KN9 370 aaPredicted RBP16.42■□□□□ 0.22
UBASH3B-204ENST00000526493 NHSQ6T4R5 1651 aa16.41■□□□□ 0.22
UBASH3B-204ENST00000526493 NBPF26B4DH59 902 aa16.41■□□□□ 0.22
UBASH3B-204ENST00000526493 PIP4K2AP48426 406 aaPredicted RBP16.41■□□□□ 0.22
UBASH3B-204ENST00000526493 BEND3Q5T5X7 828 aa16.41■□□□□ 0.22
UBASH3B-204ENST00000526493 NBPF14Q5TI25 921 aa16.41■□□□□ 0.22
UBASH3B-204ENST00000526493 NBPF10Q6P3W6 841 aaKnown RBP16.41■□□□□ 0.22
UBASH3B-204ENST00000526493 NBPF15Q8N660 670 aa16.41■□□□□ 0.22
UBASH3B-204ENST00000526493 XAGE3Q8WTP9 111 aa16.41■□□□□ 0.22
UBASH3B-204ENST00000526493 SYTL4Q96C24 671 aaPredicted RBP16.41■□□□□ 0.22
UBASH3B-204ENST00000526493 ACSBG1Q96GR2 724 aa16.41■□□□□ 0.22
UBASH3B-204ENST00000526493 SRCIN1Q9C0H9 1055 aa16.41■□□□□ 0.22
UBASH3B-204ENST00000526493 MAP3K2Q9Y2U5 619 aa16.41■□□□□ 0.22
UBASH3B-204ENST00000526493 BTAF1O14981 1849 aa16.4■□□□□ 0.22
UBASH3B-204ENST00000526493 BRWD3Q6RI45 1802 aa16.4■□□□□ 0.22
UBASH3B-204ENST00000526493 ZNF831Q5JPB2 1677 aa16.4■□□□□ 0.22
UBASH3B-204ENST00000526493 DDX58O95786 925 aaKnown RBP16.4■□□□□ 0.22
UBASH3B-204ENST00000526493 AIMP1Q12904 312 aaKnown RBP16.4■□□□□ 0.22
UBASH3B-204ENST00000526493 COPS6Q7L5N1 327 aa16.4■□□□□ 0.22
UBASH3B-204ENST00000526493 SMC5Q8IY18 1101 aa16.4■□□□□ 0.22
UBASH3B-204ENST00000526493 SLC4A9Q96Q91 983 aa16.4■□□□□ 0.22
UBASH3B-204ENST00000526493 TRPC5Q9UL62 973 aaPredicted RBP16.4■□□□□ 0.22
UBASH3B-204ENST00000526493 A1BGP04217 495 aa16.39■□□□□ 0.21
UBASH3B-204ENST00000526493 GNAI3P08754 354 aa16.39■□□□□ 0.21
UBASH3B-204ENST00000526493 DNAJC10Q8IXB1 793 aa16.39■□□□□ 0.21
UBASH3B-204ENST00000526493 ANKRD44Q8N8A2 993 aa16.39■□□□□ 0.21
UBASH3B-204ENST00000526493 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
UBASH3B-204ENST00000526493 TEX13AQ9BXU3 409 aaPredicted RBP16.39■□□□□ 0.21
UBASH3B-204ENST00000526493 USP44Q9H0E7 712 aa16.39■□□□□ 0.21
UBASH3B-204ENST00000526493 RREB1Q92766 1687 aa16.39■□□□□ 0.21
UBASH3B-204ENST00000526493 ONECUT3O60422 494 aaPredicted RBP16.38■□□□□ 0.21
UBASH3B-204ENST00000526493 CEP85Q6P2H3 762 aa16.38■□□□□ 0.21
UBASH3B-204ENST00000526493 TSHZ2Q9NRE2 1034 aa16.38■□□□□ 0.21
UBASH3B-204ENST00000526493 PDZRN3Q9UPQ7 1066 aa16.38■□□□□ 0.21
UBASH3B-204ENST00000526493 COL5A3P25940 1745 aaPredicted RBP16.38■□□□□ 0.21
UBASH3B-204ENST00000526493 ALDH1L1O75891 902 aa16.37■□□□□ 0.21
UBASH3B-204ENST00000526493 GNAI2P04899 355 aa16.37■□□□□ 0.21
UBASH3B-204ENST00000526493 RPAP2Q8IXW5 612 aaPredicted RBP16.37■□□□□ 0.21
UBASH3B-204ENST00000526493 A0A0G2JS52 829 aa16.36■□□□□ 0.21
UBASH3B-204ENST00000526493 KCNQ2O43526 872 aa16.36■□□□□ 0.21
UBASH3B-204ENST00000526493 MYT1Q01538 1121 aa16.36■□□□□ 0.21
UBASH3B-204ENST00000526493 ANKRD13DQ6ZTN6 518 aa16.36■□□□□ 0.21
UBASH3B-204ENST00000526493 RIC3Q7Z5B4 369 aa16.36■□□□□ 0.21
UBASH3B-204ENST00000526493 RNF39Q9H2S5 420 aa16.36■□□□□ 0.21
UBASH3B-204ENST00000526493 QTRT2Q9H974 415 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms