RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 FMNL2Q96PY5 1086 aa17.83■□□□□ 0.44
USH1C-203ENST00000526181 PRAMEF22A3QJZ6 481 aa17.82■□□□□ 0.44
USH1C-203ENST00000526181 NEFMP07197 916 aa17.82■□□□□ 0.44
USH1C-203ENST00000526181 C10orf71Q711Q0 1435 aa17.81■□□□□ 0.44
USH1C-203ENST00000526181 MAPK8IP3Q9UPT6 1336 aa17.81■□□□□ 0.44
USH1C-203ENST00000526181 STARD3NLO95772 234 aa17.81■□□□□ 0.44
USH1C-203ENST00000526181 DDR1Q08345 913 aa17.81■□□□□ 0.44
USH1C-203ENST00000526181 NFE2L2Q16236 605 aa17.81■□□□□ 0.44
USH1C-203ENST00000526181 THUMPD2Q9BTF0 503 aaKnown RBP17.81■□□□□ 0.44
USH1C-203ENST00000526181 MIS18AQ9NYP9 233 aa17.81■□□□□ 0.44
USH1C-203ENST00000526181 KIAA1551Q9HCM1 1747 aa17.81■□□□□ 0.44
USH1C-203ENST00000526181 PRKRIP1Q9H875 184 aaPredicted RBP17.8■□□□□ 0.44
USH1C-203ENST00000526181 PARP3Q9Y6F1 533 aa17.8■□□□□ 0.44
USH1C-203ENST00000526181 PXDNLA1KZ92 1463 aa17.8■□□□□ 0.44
USH1C-203ENST00000526181 DLG5Q8TDM6 1919 aa17.8■□□□□ 0.44
USH1C-203ENST00000526181 ZPR1O75312 459 aa17.79■□□□□ 0.44
USH1C-203ENST00000526181 A1BGP04217 495 aa17.79■□□□□ 0.44
USH1C-203ENST00000526181 BCL2L12Q9HB09 334 aa17.79■□□□□ 0.44
USH1C-203ENST00000526181 NARFQ9UHQ1 456 aa17.79■□□□□ 0.44
USH1C-203ENST00000526181 USP16Q9Y5T5 823 aa17.79■□□□□ 0.44
USH1C-203ENST00000526181 KIF13BQ9NQT8 1826 aa17.78■□□□□ 0.44
USH1C-203ENST00000526181 PIP4K2AP48426 406 aaPredicted RBP17.78■□□□□ 0.44
USH1C-203ENST00000526181 EIF5P55010 431 aaKnown RBP17.78■□□□□ 0.44
USH1C-203ENST00000526181 TEX13AQ9BXU3 409 aaPredicted RBP17.78■□□□□ 0.44
USH1C-203ENST00000526181 PNNQ9H307 717 aaKnown RBP17.78■□□□□ 0.44
USH1C-203ENST00000526181 ZNF330Q9Y3S2 320 aaPredicted RBP17.78■□□□□ 0.44
USH1C-203ENST00000526181 POLRMTO00411 1230 aaKnown RBP17.77■□□□□ 0.44
USH1C-203ENST00000526181 TM4SF1P30408 202 aa17.77■□□□□ 0.44
USH1C-203ENST00000526181 TAF7Q15545 349 aaPredicted RBP17.77■□□□□ 0.44
USH1C-203ENST00000526181 CCDC146Q8IYE0 955 aa17.77■□□□□ 0.44
USH1C-203ENST00000526181 NFIXQ14938 502 aa17.76■□□□□ 0.43
USH1C-203ENST00000526181 KDM3BQ7LBC6 1761 aa17.76■□□□□ 0.43
USH1C-203ENST00000526181 SCN7AQ01118 1682 aa17.75■□□□□ 0.43
USH1C-203ENST00000526181 A0A0G2JLW4 131 aa17.75■□□□□ 0.43
USH1C-203ENST00000526181 SNRPA1P09661 255 aaKnown RBP17.75■□□□□ 0.43
USH1C-203ENST00000526181 TBC1D2BQ9UPU7 963 aa17.75■□□□□ 0.43
USH1C-203ENST00000526181 RRP7AQ9Y3A4 280 aaKnown RBP17.75■□□□□ 0.43
USH1C-203ENST00000526181 N4BP2Q86UW6 1770 aaPredicted RBP17.75■□□□□ 0.43
USH1C-203ENST00000526181 GRIN3BO60391 1043 aa17.74■□□□□ 0.43
USH1C-203ENST00000526181 IL6STP40189 918 aaPredicted RBP17.74■□□□□ 0.43
USH1C-203ENST00000526181 RIPK4P57078 832 aa17.74■□□□□ 0.43
USH1C-203ENST00000526181 WDR43Q15061 677 aaKnown RBP eCLIP17.74■□□□□ 0.43
USH1C-203ENST00000526181 UTRNP46939 3433 aa17.74■□□□□ 0.43
USH1C-203ENST00000526181 A0A087WZG4 1122 aa17.73■□□□□ 0.43
USH1C-203ENST00000526181 DPEP1P16444 411 aa17.73■□□□□ 0.43
USH1C-203ENST00000526181 TMPOP42166 694 aaKnown RBP17.73■□□□□ 0.43
USH1C-203ENST00000526181 TGFB2P61812 414 aa17.73■□□□□ 0.43
USH1C-203ENST00000526181 ADAMTS8Q9UP79 889 aa17.73■□□□□ 0.43
USH1C-203ENST00000526181 BICDL1Q6ZP65 573 aa17.72■□□□□ 0.43
USH1C-203ENST00000526181 ZNF784Q8NCA9 323 aaPredicted RBP17.72■□□□□ 0.43
USH1C-203ENST00000526181 PNISRQ8TF01 805 aaKnown RBP17.72■□□□□ 0.43
USH1C-203ENST00000526181 NBPF26B4DH59 902 aa17.71■□□□□ 0.43
USH1C-203ENST00000526181 NEUROD2Q15784 382 aa17.71■□□□□ 0.43
USH1C-203ENST00000526181 TBC1D9BQ66K14 1250 aa17.71■□□□□ 0.43
USH1C-203ENST00000526181 NBPF10Q6P3W6 841 aaKnown RBP17.71■□□□□ 0.43
USH1C-203ENST00000526181 NBPF15Q8N660 670 aa17.71■□□□□ 0.43
USH1C-203ENST00000526181 LAMB4A4D0S4 1761 aa17.71■□□□□ 0.43
USH1C-203ENST00000526181 NRXN2Q9P2S2 1712 aa17.7■□□□□ 0.42
USH1C-203ENST00000526181 ZNF316A6NFI3 1004 aaPredicted RBP17.7■□□□□ 0.42
USH1C-203ENST00000526181 CAMTA2O94983 1202 aa17.7■□□□□ 0.42
USH1C-203ENST00000526181 SERPINB2P05120 415 aa17.7■□□□□ 0.42
USH1C-203ENST00000526181 KCNA3P22001 575 aa17.7■□□□□ 0.42
USH1C-203ENST00000526181 EIF4A1P60842 406 aaKnown RBP17.7■□□□□ 0.42
USH1C-203ENST00000526181 RUNDC1Q96C34 613 aa17.7■□□□□ 0.42
USH1C-203ENST00000526181 CARMIL3Q8ND23 1372 aa17.69■□□□□ 0.42
USH1C-203ENST00000526181 BCORQ6W2J9 1755 aa17.69■□□□□ 0.42
USH1C-203ENST00000526181 CHD4Q14839 1912 aa17.69■□□□□ 0.42
USH1C-203ENST00000526181 CHRNA5P30532 468 aa17.69■□□□□ 0.42
USH1C-203ENST00000526181 DZIP3Q86Y13 1208 aaKnown RBP17.69■□□□□ 0.42
USH1C-203ENST00000526181 BCS1LQ9Y276 419 aa17.69■□□□□ 0.42
USH1C-203ENST00000526181 GOLGB1Q14789 3259 aaKnown RBP17.68■□□□□ 0.42
USH1C-203ENST00000526181 AFDNP55196 1824 aaKnown RBP17.68■□□□□ 0.42
USH1C-203ENST00000526181 GIGYF1O75420 1035 aaPredicted RBP17.68■□□□□ 0.42
USH1C-203ENST00000526181 CCDC184Q52MB2 194 aa17.68■□□□□ 0.42
USH1C-203ENST00000526181 TSPYL4Q9UJ04 414 aa17.68■□□□□ 0.42
USH1C-203ENST00000526181 LMOD3Q0VAK6 560 aa17.67■□□□□ 0.42
USH1C-203ENST00000526181 NPM2Q86SE8 214 aaKnown RBP17.67■□□□□ 0.42
USH1C-203ENST00000526181 TRIM35Q9UPQ4 493 aa17.67■□□□□ 0.42
USH1C-203ENST00000526181 BRCA1P38398 1863 aaKnown RBP17.66■□□□□ 0.42
USH1C-203ENST00000526181 CCDC24Q8N4L8 307 aa17.65■□□□□ 0.42
USH1C-203ENST00000526181 PIM2Q9P1W9 311 aa17.64■□□□□ 0.41
USH1C-203ENST00000526181 PRR5LQ6MZQ0 368 aa17.63■□□□□ 0.41
USH1C-203ENST00000526181 NGEFQ8N5V2 710 aa17.63■□□□□ 0.41
USH1C-203ENST00000526181 MYL6BP14649 208 aa17.62■□□□□ 0.41
USH1C-203ENST00000526181 SETDB2Q96T68 719 aa17.62■□□□□ 0.41
USH1C-203ENST00000526181 LAS1LQ9Y4W2 734 aaKnown RBP17.62■□□□□ 0.41
USH1C-203ENST00000526181 ADCY9O60503 1353 aa17.62■□□□□ 0.41
USH1C-203ENST00000526181 ATP10DQ9P241 1426 aa17.62■□□□□ 0.41
USH1C-203ENST00000526181 APAF1O14727 1248 aa17.61■□□□□ 0.41
USH1C-203ENST00000526181 HLFQ16534 295 aa17.61■□□□□ 0.41
USH1C-203ENST00000526181 KRT24Q2M2I5 525 aa17.61■□□□□ 0.41
USH1C-203ENST00000526181 DALRD3Q5D0E6 543 aaKnown RBP17.61■□□□□ 0.41
USH1C-203ENST00000526181 ARHGAP27Q6ZUM4 889 aa17.61■□□□□ 0.41
USH1C-203ENST00000526181 ANKRD31Q8N7Z5 1873 aa17.61■□□□□ 0.41
USH1C-203ENST00000526181 C2CD5Q86YS7 1000 aa17.6■□□□□ 0.41
USH1C-203ENST00000526181 BABAM1Q9NWV8 329 aa17.6■□□□□ 0.41
USH1C-203ENST00000526181 DLEC1Q9Y238 1755 aa17.6■□□□□ 0.41
USH1C-203ENST00000526181 COL11A2P13942 1736 aaPredicted RBP17.59■□□□□ 0.41
USH1C-203ENST00000526181 CHL1O00533 1208 aa17.59■□□□□ 0.41
USH1C-203ENST00000526181 EIF2S2P20042 333 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms