RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 FAM9BQ8IZU0 186 aa22.81■■□□□ 1.24
CCS-204ENST00000526066 MYH14Q7Z406 1995 aaKnown RBP22.81■■□□□ 1.24
CCS-204ENST00000526066 C9orf131Q5VYM1 1079 aa22.8■■□□□ 1.24
CCS-204ENST00000526066 NFATC2IPQ8NCF5 419 aa22.8■■□□□ 1.24
CCS-204ENST00000526066 KDM2BQ8NHM5 1336 aa22.8■■□□□ 1.24
CCS-204ENST00000526066 NMRK2Q9NPI5 230 aa22.79■■□□□ 1.24
CCS-204ENST00000526066 USP42Q9H9J4 1324 aaKnown RBP22.79■■□□□ 1.24
CCS-204ENST00000526066 ZPR1O75312 459 aa22.77■■□□□ 1.24
CCS-204ENST00000526066 PRKAR2BP31323 418 aa22.77■■□□□ 1.24
CCS-204ENST00000526066 SRP68Q9UHB9 627 aaKnown RBP22.77■■□□□ 1.24
CCS-204ENST00000526066 RBM46Q8TBY0 533 aaKnown RBP22.76■■□□□ 1.23
CCS-204ENST00000526066 PLEKHF1Q96S99 279 aa22.76■■□□□ 1.23
CCS-204ENST00000526066 TJP1Q07157 1748 aa22.76■■□□□ 1.23
CCS-204ENST00000526066 SCN11AQ9UI33 1791 aa22.76■■□□□ 1.23
CCS-204ENST00000526066 FKBP8Q14318 412 aa22.75■■□□□ 1.23
CCS-204ENST00000526066 RUNDC1Q96C34 613 aa22.75■■□□□ 1.23
CCS-204ENST00000526066 RNF181Q9P0P0 153 aa22.75■■□□□ 1.23
CCS-204ENST00000526066 DNAJC5GQ8N7S2 189 aa22.74■■□□□ 1.23
CCS-204ENST00000526066 WDR90Q96KV7 1748 aa22.74■■□□□ 1.23
CCS-204ENST00000526066 NEFMP07197 916 aa22.73■■□□□ 1.23
CCS-204ENST00000526066 KCNA3P22001 575 aa22.73■■□□□ 1.23
CCS-204ENST00000526066 DDR1Q08345 913 aa22.72■■□□□ 1.23
CCS-204ENST00000526066 FSTL1Q12841 308 aa22.72■■□□□ 1.23
CCS-204ENST00000526066 AKAP4Q5JQC9 854 aa22.72■■□□□ 1.23
CCS-204ENST00000526066 MAPK8IP3Q9UPT6 1336 aa22.71■■□□□ 1.23
CCS-204ENST00000526066 TNRC6CQ9HCJ0 1690 aaKnown RBP22.71■■□□□ 1.23
CCS-204ENST00000526066 CHRNA5P30532 468 aa22.7■■□□□ 1.22
CCS-204ENST00000526066 CCDC146Q8IYE0 955 aa22.7■■□□□ 1.22
CCS-204ENST00000526066 PHACTR3Q96KR7 559 aa22.7■■□□□ 1.22
CCS-204ENST00000526066 KCPQ6ZWJ8 1503 aa22.7■■□□□ 1.22
CCS-204ENST00000526066 POLRMTO00411 1230 aaKnown RBP22.69■■□□□ 1.22
CCS-204ENST00000526066 USPL1Q5W0Q7 1092 aa22.69■■□□□ 1.22
CCS-204ENST00000526066 INTS5Q6P9B9 1019 aaKnown RBP22.69■■□□□ 1.22
CCS-204ENST00000526066 SLC52A2Q9HAB3 445 aa22.69■■□□□ 1.22
CCS-204ENST00000526066 DNAJC10Q8IXB1 793 aa22.68■■□□□ 1.22
CCS-204ENST00000526066 GAS2L2Q8NHY3 880 aa22.67■■□□□ 1.22
CCS-204ENST00000526066 SOS1Q07889 1333 aaPredicted RBP22.66■■□□□ 1.22
CCS-204ENST00000526066 TM4SF1P30408 202 aa22.66■■□□□ 1.22
CCS-204ENST00000526066 RRAGCQ9HB90 399 aa22.66■■□□□ 1.22
CCS-204ENST00000526066 ZC3H4Q9UPT8 1303 aaKnown RBP22.65■■□□□ 1.22
CCS-204ENST00000526066 SBF1O95248 1867 aa22.65■■□□□ 1.22
CCS-204ENST00000526066 NFE2L2Q16236 605 aa22.65■■□□□ 1.22
CCS-204ENST00000526066 MTHFSDQ2M296 383 aaKnown RBP22.65■■□□□ 1.22
CCS-204ENST00000526066 NCBP3Q53F19 620 aaKnown RBP22.65■■□□□ 1.22
CCS-204ENST00000526066 COL15A1P39059 1388 aa22.64■■□□□ 1.22
CCS-204ENST00000526066 VIRMAQ69YN4 1812 aaKnown RBP22.64■■□□□ 1.22
CCS-204ENST00000526066 APAF1O14727 1248 aa22.64■■□□□ 1.21
CCS-204ENST00000526066 NGEFQ8N5V2 710 aa22.64■■□□□ 1.21
CCS-204ENST00000526066 SMC1BQ8NDV3 1235 aa22.64■■□□□ 1.21
CCS-204ENST00000526066 KLRG1Q96E93 195 aa22.64■■□□□ 1.21
CCS-204ENST00000526066 NARFQ9UHQ1 456 aa22.64■■□□□ 1.21
CCS-204ENST00000526066 ADAMTS7Q9UKP4 1686 aa22.64■■□□□ 1.21
CCS-204ENST00000526066 MRC1P22897 1456 aa22.63■■□□□ 1.21
CCS-204ENST00000526066 CYP19A1P11511 503 aaPredicted RBP22.63■■□□□ 1.21
CCS-204ENST00000526066 TMPOP42166 694 aaKnown RBP22.63■■□□□ 1.21
CCS-204ENST00000526066 AFDNP55196 1824 aaKnown RBP22.63■■□□□ 1.21
CCS-204ENST00000526066 RNMTO43148 476 aaKnown RBP22.62■■□□□ 1.21
CCS-204ENST00000526066 LMNB1P20700 586 aa22.62■■□□□ 1.21
CCS-204ENST00000526066 NFIXQ14938 502 aa22.62■■□□□ 1.21
CCS-204ENST00000526066 LGR6Q9HBX8 967 aa22.62■■□□□ 1.21
CCS-204ENST00000526066 SLC39A6Q13433 755 aa22.61■■□□□ 1.21
CCS-204ENST00000526066 TTC5Q8N0Z6 440 aa22.61■■□□□ 1.21
CCS-204ENST00000526066 DLEC1Q9Y238 1755 aa22.61■■□□□ 1.21
CCS-204ENST00000526066 SERPINB2P05120 415 aa22.6■■□□□ 1.21
CCS-204ENST00000526066 RASSF7Q02833 373 aa22.6■■□□□ 1.21
CCS-204ENST00000526066 VSIG10Q8N0Z9 540 aa22.6■■□□□ 1.21
CCS-204ENST00000526066 TTLL6Q8N841 843 aa22.6■■□□□ 1.21
CCS-204ENST00000526066 ZBTB1Q9Y2K1 713 aa22.6■■□□□ 1.21
CCS-204ENST00000526066 H0YIN7 160 aa22.59■■□□□ 1.21
CCS-204ENST00000526066 STARD3NLO95772 234 aa22.59■■□□□ 1.21
CCS-204ENST00000526066 HTRA3P83110 453 aa22.59■■□□□ 1.21
CCS-204ENST00000526066 C2CD5Q86YS7 1000 aa22.59■■□□□ 1.21
CCS-204ENST00000526066 NRXN2Q9P2S2 1712 aa22.58■■□□□ 1.21
CCS-204ENST00000526066 A0A087WZG4 1122 aa22.58■■□□□ 1.21
CCS-204ENST00000526066 HTATSF1O43719 755 aaKnown RBP22.58■■□□□ 1.21
CCS-204ENST00000526066 CANXP27824 592 aaKnown RBP22.58■■□□□ 1.21
CCS-204ENST00000526066 RIPK4P57078 832 aa22.58■■□□□ 1.21
CCS-204ENST00000526066 CCDC27Q2M243 656 aa22.58■■□□□ 1.21
CCS-204ENST00000526066 JMYQ8N9B5 988 aa22.58■■□□□ 1.21
CCS-204ENST00000526066 GNAT3A8MTJ3 354 aa22.57■■□□□ 1.2
CCS-204ENST00000526066 VEGFAP15692 232 aaPredicted RBP22.57■■□□□ 1.2
CCS-204ENST00000526066 LMOD3Q0VAK6 560 aa22.57■■□□□ 1.2
CCS-204ENST00000526066 NPM2Q86SE8 214 aaKnown RBP22.57■■□□□ 1.2
CCS-204ENST00000526066 RRP7AQ9Y3A4 280 aaKnown RBP22.57■■□□□ 1.2
CCS-204ENST00000526066 TIAM2Q8IVF5 1701 aa22.57■■□□□ 1.2
CCS-204ENST00000526066 GLTPD2A6NH11 291 aa22.55■■□□□ 1.2
CCS-204ENST00000526066 HNRNPUQ00839 825 aaKnown RBP eCLIP22.55■■□□□ 1.2
CCS-204ENST00000526066 BICDL1Q6ZP65 573 aa22.55■■□□□ 1.2
CCS-204ENST00000526066 UBR2Q8IWV8 1755 aa22.54■■□□□ 1.2
CCS-204ENST00000526066 NPHP1O15259 732 aa22.54■■□□□ 1.2
CCS-204ENST00000526066 TEFQ10587 303 aa22.54■■□□□ 1.2
CCS-204ENST00000526066 NEUROD2Q15784 382 aa22.54■■□□□ 1.2
CCS-204ENST00000526066 COL13A1Q5TAT6 717 aaPredicted RBP22.54■■□□□ 1.2
CCS-204ENST00000526066 TRIM35Q9UPQ4 493 aa22.54■■□□□ 1.2
CCS-204ENST00000526066 PDZRN3Q9UPQ7 1066 aa22.54■■□□□ 1.2
CCS-204ENST00000526066 CCDC88AQ3V6T2 1871 aa22.54■■□□□ 1.2
CCS-204ENST00000526066 DPY19L2Q6NUT2 758 aa22.53■■□□□ 1.2
CCS-204ENST00000526066 ZNF330Q9Y3S2 320 aaPredicted RBP22.53■■□□□ 1.2
CCS-204ENST00000526066 PDE6BP35913 854 aa22.52■■□□□ 1.2
CCS-204ENST00000526066 RTF1Q92541 710 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms