RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 CC2D1BQ5T0F9 858 aaKnown RBP32.46■■■□□ 2.79
USP47-205ENST00000525257 ZBTB1Q9Y2K1 713 aa32.46■■■□□ 2.79
USP47-205ENST00000525257 AFDNP55196 1824 aaKnown RBP32.45■■■□□ 2.79
USP47-205ENST00000525257 DIAPH1O60610 1272 aaKnown RBP32.45■■■□□ 2.79
USP47-205ENST00000525257 APLP1P51693 650 aa32.45■■■□□ 2.79
USP47-205ENST00000525257 RNF181Q9P0P0 153 aa32.44■■■□□ 2.78
USP47-205ENST00000525257 NARFQ9UHQ1 456 aa32.43■■■□□ 2.78
USP47-205ENST00000525257 UBR2Q8IWV8 1755 aa32.42■■■□□ 2.78
USP47-205ENST00000525257 PER1O15534 1290 aaPredicted RBP32.42■■■□□ 2.78
USP47-205ENST00000525257 NFIXQ14938 502 aa32.42■■■□□ 2.78
USP47-205ENST00000525257 NRXN2Q9P2S2 1712 aa32.4■■■□□ 2.78
USP47-205ENST00000525257 SBF1O95248 1867 aa32.4■■■□□ 2.78
USP47-205ENST00000525257 C16orf71Q8IYS4 520 aaPredicted RBP32.39■■■□□ 2.78
USP47-205ENST00000525257 VSIG10Q8N0Z9 540 aa32.38■■■□□ 2.77
USP47-205ENST00000525257 BCL2L12Q9HB09 334 aa32.38■■■□□ 2.77
USP47-205ENST00000525257 KDM2BQ8NHM5 1336 aa32.37■■■□□ 2.77
USP47-205ENST00000525257 CANXP27824 592 aaKnown RBP32.37■■■□□ 2.77
USP47-205ENST00000525257 CNGB1Q14028 1251 aaPredicted RBP32.37■■■□□ 2.77
USP47-205ENST00000525257 RBM46Q8TBY0 533 aaKnown RBP32.37■■■□□ 2.77
USP47-205ENST00000525257 COL3A1P02461 1466 aaPredicted RBP32.36■■■□□ 2.77
USP47-205ENST00000525257 TTC5Q8N0Z6 440 aa32.36■■■□□ 2.77
USP47-205ENST00000525257 DLEC1Q9Y238 1755 aa32.36■■■□□ 2.77
USP47-205ENST00000525257 SERPINB2P05120 415 aa32.35■■■□□ 2.77
USP47-205ENST00000525257 WDR90Q96KV7 1748 aa32.34■■■□□ 2.77
USP47-205ENST00000525257 RASSF7Q02833 373 aa32.34■■■□□ 2.77
USP47-205ENST00000525257 U2SURPO15042 1029 aaKnown RBP32.33■■■□□ 2.77
USP47-205ENST00000525257 TNRC6CQ9HCJ0 1690 aaKnown RBP32.33■■■□□ 2.77
USP47-205ENST00000525257 DNAJC5GQ8N7S2 189 aa32.32■■■□□ 2.76
USP47-205ENST00000525257 RRAGCQ9HB90 399 aa32.32■■■□□ 2.76
USP47-205ENST00000525257 CARMIL3Q8ND23 1372 aa32.32■■■□□ 2.76
USP47-205ENST00000525257 STARD3NLO95772 234 aa32.31■■■□□ 2.76
USP47-205ENST00000525257 BICDL1Q6ZP65 573 aa32.31■■■□□ 2.76
USP47-205ENST00000525257 TEFQ10587 303 aa32.3■■■□□ 2.76
USP47-205ENST00000525257 EIF5P55010 431 aaKnown RBP32.29■■■□□ 2.76
USP47-205ENST00000525257 C2CD5Q86YS7 1000 aa32.29■■■□□ 2.76
USP47-205ENST00000525257 ZNF496Q96IT1 587 aaPredicted RBP32.29■■■□□ 2.76
USP47-205ENST00000525257 SIPA1L3O60292 1781 aaPredicted RBP32.29■■■□□ 2.76
USP47-205ENST00000525257 GNAT3A8MTJ3 354 aa32.28■■■□□ 2.76
USP47-205ENST00000525257 IL17REQ8NFR9 667 aa32.28■■■□□ 2.76
USP47-205ENST00000525257 TTLL6Q8N841 843 aa32.27■■■□□ 2.76
USP47-205ENST00000525257 GAS2L2Q8NHY3 880 aa32.27■■■□□ 2.76
USP47-205ENST00000525257 NPC1L1Q9UHC9 1359 aa32.27■■■□□ 2.76
USP47-205ENST00000525257 HEG1Q9ULI3 1381 aa32.27■■■□□ 2.76
USP47-205ENST00000525257 SCN7AQ01118 1682 aa32.27■■■□□ 2.76
USP47-205ENST00000525257 A0A087WZG4 1122 aa32.26■■■□□ 2.75
USP47-205ENST00000525257 HTRA3P83110 453 aa32.26■■■□□ 2.75
USP47-205ENST00000525257 FSTL1Q12841 308 aa32.26■■■□□ 2.75
USP47-205ENST00000525257 ZNF790Q6PG37 636 aa32.26■■■□□ 2.75
USP47-205ENST00000525257 ZNF330Q9Y3S2 320 aaPredicted RBP32.26■■■□□ 2.75
USP47-205ENST00000525257 H0YIN7 160 aa32.25■■■□□ 2.75
USP47-205ENST00000525257 LMNB1P20700 586 aa32.24■■■□□ 2.75
USP47-205ENST00000525257 PRELPP51888 382 aa32.24■■■□□ 2.75
USP47-205ENST00000525257 TBC1D9BQ66K14 1250 aa32.24■■■□□ 2.75
USP47-205ENST00000525257 TIAM2Q8IVF5 1701 aa32.23■■■□□ 2.75
USP47-205ENST00000525257 ANKRD31Q8N7Z5 1873 aa32.23■■■□□ 2.75
USP47-205ENST00000525257 ZC3H4Q9UPT8 1303 aaKnown RBP32.23■■■□□ 2.75
USP47-205ENST00000525257 TEX13AQ9BXU3 409 aaPredicted RBP32.22■■■□□ 2.75
USP47-205ENST00000525257 CCDC88AQ3V6T2 1871 aa32.22■■■□□ 2.75
USP47-205ENST00000525257 TBC1D2BQ9UPU7 963 aa32.21■■■□□ 2.75
USP47-205ENST00000525257 CCDC24Q8N4L8 307 aa32.19■■■□□ 2.74
USP47-205ENST00000525257 FMNL2Q96PY5 1086 aa32.19■■■□□ 2.74
USP47-205ENST00000525257 COL11A2P13942 1736 aaPredicted RBP32.18■■■□□ 2.74
USP47-205ENST00000525257 NFKBIEO00221 500 aa32.18■■■□□ 2.74
USP47-205ENST00000525257 IL6STP40189 918 aaPredicted RBP32.17■■■□□ 2.74
USP47-205ENST00000525257 SMC1BQ8NDV3 1235 aa32.17■■■□□ 2.74
USP47-205ENST00000525257 ZNF622Q969S3 477 aaKnown RBP eCLIP32.17■■■□□ 2.74
USP47-205ENST00000525257 KLRG1Q96E93 195 aa32.17■■■□□ 2.74
USP47-205ENST00000525257 CEMIPQ8WUJ3 1361 aa32.17■■■□□ 2.74
USP47-205ENST00000525257 GLTPD2A6NH11 291 aa32.16■■■□□ 2.74
USP47-205ENST00000525257 A1BGP04217 495 aa32.16■■■□□ 2.74
USP47-205ENST00000525257 PRKAR2BP31323 418 aa32.16■■■□□ 2.74
USP47-205ENST00000525257 PRR5LQ6MZQ0 368 aa32.16■■■□□ 2.74
USP47-205ENST00000525257 PHACTR3Q96KR7 559 aa32.16■■■□□ 2.74
USP47-205ENST00000525257 KCNQ3O43525 872 aa32.15■■■□□ 2.74
USP47-205ENST00000525257 BRIP1Q9BX63 1249 aa32.15■■■□□ 2.74
USP47-205ENST00000525257 ZNF219Q9P2Y4 722 aaPredicted RBP32.15■■■□□ 2.74
USP47-205ENST00000525257 PDE6BP35913 854 aa32.14■■■□□ 2.74
USP47-205ENST00000525257 NPM2Q86SE8 214 aaKnown RBP32.14■■■□□ 2.74
USP47-205ENST00000525257 BTBD11A6QL63 1104 aa32.13■■■□□ 2.73
USP47-205ENST00000525257 RSPH6AQ9H0K4 717 aa32.13■■■□□ 2.73
USP47-205ENST00000525257 BCORQ6W2J9 1755 aa32.12■■■□□ 2.73
USP47-205ENST00000525257 VEGFAP15692 232 aaPredicted RBP32.12■■■□□ 2.73
USP47-205ENST00000525257 CFAP53Q96M91 514 aa32.12■■■□□ 2.73
USP47-205ENST00000525257 C21orf2O43822 256 aa32.11■■■□□ 2.73
USP47-205ENST00000525257 CAMTA2O94983 1202 aa32.11■■■□□ 2.73
USP47-205ENST00000525257 PDZRN3Q9UPQ7 1066 aa32.11■■■□□ 2.73
USP47-205ENST00000525257 SETDB2Q96T68 719 aa32.1■■■□□ 2.73
USP47-205ENST00000525257 NPHP1O15259 732 aa32.09■■■□□ 2.73
USP47-205ENST00000525257 CNBD1Q8NA66 436 aa32.09■■■□□ 2.73
USP47-205ENST00000525257 CACNA1SQ13698 1873 aa32.09■■■□□ 2.73
USP47-205ENST00000525257 FER1L6Q2WGJ9 1857 aa32.09■■■□□ 2.73
USP47-205ENST00000525257 PIP4K2AP48426 406 aaPredicted RBP32.08■■■□□ 2.73
USP47-205ENST00000525257 DZIP3Q86Y13 1208 aaKnown RBP32.08■■■□□ 2.73
USP47-205ENST00000525257 JMYQ8N9B5 988 aa32.07■■■□□ 2.72
USP47-205ENST00000525257 DICER1Q9UPY3 1922 aaKnown RBP32.06■■■□□ 2.72
USP47-205ENST00000525257 USP16Q9Y5T5 823 aa32.06■■■□□ 2.72
USP47-205ENST00000525257 PRAMEF22A3QJZ6 481 aa32.05■■■□□ 2.72
USP47-205ENST00000525257 ST5P78524 1137 aa32.05■■■□□ 2.72
USP47-205ENST00000525257 NUDCQ9Y266 331 aa32.05■■■□□ 2.72
USP47-205ENST00000525257 SLX4Q8IY92 1834 aa32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms