RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 NARFQ9UHQ1 456 aa23.18■■□□□ 1.3
TSKU-202ENST00000525167 UBR2Q8IWV8 1755 aa23.17■■□□□ 1.3
TSKU-202ENST00000525167 C9orf131Q5VYM1 1079 aa23.16■■□□□ 1.3
TSKU-202ENST00000525167 APLP1P51693 650 aa23.15■■□□□ 1.3
TSKU-202ENST00000525167 CC2D1BQ5T0F9 858 aaKnown RBP23.15■■□□□ 1.3
TSKU-202ENST00000525167 ZBTB1Q9Y2K1 713 aa23.15■■□□□ 1.3
TSKU-202ENST00000525167 NRXN2Q9P2S2 1712 aa23.15■■□□□ 1.3
TSKU-202ENST00000525167 COL3A1P02461 1466 aaPredicted RBP23.15■■□□□ 1.3
TSKU-202ENST00000525167 CHRNA5P30532 468 aa23.13■■□□□ 1.29
TSKU-202ENST00000525167 NFIXQ14938 502 aa23.13■■□□□ 1.29
TSKU-202ENST00000525167 TTC5Q8N0Z6 440 aa23.13■■□□□ 1.29
TSKU-202ENST00000525167 STARD3NLO95772 234 aa23.12■■□□□ 1.29
TSKU-202ENST00000525167 IFFO2Q5TF58 517 aa23.12■■□□□ 1.29
TSKU-202ENST00000525167 GAS2L2Q8NHY3 880 aa23.12■■□□□ 1.29
TSKU-202ENST00000525167 NMRK2Q9NPI5 230 aa23.12■■□□□ 1.29
TSKU-202ENST00000525167 KDM2BQ8NHM5 1336 aa23.11■■□□□ 1.29
TSKU-202ENST00000525167 ZC3H4Q9UPT8 1303 aaKnown RBP23.1■■□□□ 1.29
TSKU-202ENST00000525167 AFDNP55196 1824 aaKnown RBP23.1■■□□□ 1.29
TSKU-202ENST00000525167 RBM46Q8TBY0 533 aaKnown RBP23.1■■□□□ 1.29
TSKU-202ENST00000525167 TEX13AQ9BXU3 409 aaPredicted RBP23.1■■□□□ 1.29
TSKU-202ENST00000525167 BCL2L12Q9HB09 334 aa23.1■■□□□ 1.29
TSKU-202ENST00000525167 RNF181Q9P0P0 153 aa23.1■■□□□ 1.29
TSKU-202ENST00000525167 A0A087WZG4 1122 aa23.09■■□□□ 1.29
TSKU-202ENST00000525167 GNAT3A8MTJ3 354 aa23.09■■□□□ 1.29
TSKU-202ENST00000525167 TEFQ10587 303 aa23.09■■□□□ 1.29
TSKU-202ENST00000525167 DLEC1Q9Y238 1755 aa23.09■■□□□ 1.29
TSKU-202ENST00000525167 SERPINB2P05120 415 aa23.08■■□□□ 1.29
TSKU-202ENST00000525167 EIF5P55010 431 aaKnown RBP23.08■■□□□ 1.29
TSKU-202ENST00000525167 C16orf71Q8IYS4 520 aaPredicted RBP23.08■■□□□ 1.29
TSKU-202ENST00000525167 HEG1Q9ULI3 1381 aa23.07■■□□□ 1.28
TSKU-202ENST00000525167 U2SURPO15042 1029 aaKnown RBP23.07■■□□□ 1.28
TSKU-202ENST00000525167 ZNF790Q6PG37 636 aa23.07■■□□□ 1.28
TSKU-202ENST00000525167 SIPA1L3O60292 1781 aaPredicted RBP23.06■■□□□ 1.28
TSKU-202ENST00000525167 TNRC6CQ9HCJ0 1690 aaKnown RBP23.06■■□□□ 1.28
TSKU-202ENST00000525167 CANXP27824 592 aaKnown RBP23.06■■□□□ 1.28
TSKU-202ENST00000525167 FSTL1Q12841 308 aa23.06■■□□□ 1.28
TSKU-202ENST00000525167 IL17REQ8NFR9 667 aa23.06■■□□□ 1.28
TSKU-202ENST00000525167 SBF1O95248 1867 aa23.05■■□□□ 1.28
TSKU-202ENST00000525167 CEMIPQ8WUJ3 1361 aa23.05■■□□□ 1.28
TSKU-202ENST00000525167 ZNF496Q96IT1 587 aaPredicted RBP23.05■■□□□ 1.28
TSKU-202ENST00000525167 PDZRN3Q9UPQ7 1066 aa23.05■■□□□ 1.28
TSKU-202ENST00000525167 TTLL6Q8N841 843 aa23.04■■□□□ 1.28
TSKU-202ENST00000525167 SCN7AQ01118 1682 aa23.03■■□□□ 1.28
TSKU-202ENST00000525167 H0YIN7 160 aa23.02■■□□□ 1.28
TSKU-202ENST00000525167 LMNB1P20700 586 aa23.02■■□□□ 1.28
TSKU-202ENST00000525167 IL6STP40189 918 aaPredicted RBP23.02■■□□□ 1.28
TSKU-202ENST00000525167 C2CD5Q86YS7 1000 aa23.02■■□□□ 1.28
TSKU-202ENST00000525167 DNAJC5GQ8N7S2 189 aa23.02■■□□□ 1.28
TSKU-202ENST00000525167 CFAP53Q96M91 514 aa23.02■■□□□ 1.28
TSKU-202ENST00000525167 FMNL2Q96PY5 1086 aa23.02■■□□□ 1.28
TSKU-202ENST00000525167 CARMIL3Q8ND23 1372 aa23.01■■□□□ 1.27
TSKU-202ENST00000525167 WDR90Q96KV7 1748 aa23■■□□□ 1.27
TSKU-202ENST00000525167 RASSF7Q02833 373 aa22.99■■□□□ 1.27
TSKU-202ENST00000525167 BRIP1Q9BX63 1249 aa22.99■■□□□ 1.27
TSKU-202ENST00000525167 RRAGCQ9HB90 399 aa22.99■■□□□ 1.27
TSKU-202ENST00000525167 PDE6BP35913 854 aa22.98■■□□□ 1.27
TSKU-202ENST00000525167 TBC1D9BQ66K14 1250 aa22.98■■□□□ 1.27
TSKU-202ENST00000525167 BICDL1Q6ZP65 573 aa22.98■■□□□ 1.27
TSKU-202ENST00000525167 NPM2Q86SE8 214 aaKnown RBP22.98■■□□□ 1.27
TSKU-202ENST00000525167 RSPH6AQ9H0K4 717 aa22.98■■□□□ 1.27
TSKU-202ENST00000525167 PRKAR2BP31323 418 aa22.97■■□□□ 1.27
TSKU-202ENST00000525167 NUDCQ9Y266 331 aa22.97■■□□□ 1.27
TSKU-202ENST00000525167 GLTPD2A6NH11 291 aa22.96■■□□□ 1.27
TSKU-202ENST00000525167 BTBD11A6QL63 1104 aa22.96■■□□□ 1.27
TSKU-202ENST00000525167 PHACTR3Q96KR7 559 aa22.96■■□□□ 1.27
TSKU-202ENST00000525167 CNGB1Q14028 1251 aaPredicted RBP22.95■■□□□ 1.26
TSKU-202ENST00000525167 PRR5LQ6MZQ0 368 aa22.95■■□□□ 1.26
TSKU-202ENST00000525167 ANKRD31Q8N7Z5 1873 aa22.95■■□□□ 1.26
TSKU-202ENST00000525167 SMC1BQ8NDV3 1235 aa22.95■■□□□ 1.26
TSKU-202ENST00000525167 TBC1D2BQ9UPU7 963 aa22.95■■□□□ 1.26
TSKU-202ENST00000525167 ZNF330Q9Y3S2 320 aaPredicted RBP22.95■■□□□ 1.26
TSKU-202ENST00000525167 TIAM2Q8IVF5 1701 aa22.94■■□□□ 1.26
TSKU-202ENST00000525167 NFKBIEO00221 500 aa22.94■■□□□ 1.26
TSKU-202ENST00000525167 SETDB2Q96T68 719 aa22.94■■□□□ 1.26
TSKU-202ENST00000525167 CAMTA2O94983 1202 aa22.93■■□□□ 1.26
TSKU-202ENST00000525167 A1BGP04217 495 aa22.93■■□□□ 1.26
TSKU-202ENST00000525167 VEGFAP15692 232 aaPredicted RBP22.93■■□□□ 1.26
TSKU-202ENST00000525167 PRELPP51888 382 aa22.93■■□□□ 1.26
TSKU-202ENST00000525167 BCORQ6W2J9 1755 aa22.93■■□□□ 1.26
TSKU-202ENST00000525167 CNBD1Q8NA66 436 aa22.92■■□□□ 1.26
TSKU-202ENST00000525167 ZNF622Q969S3 477 aaKnown RBP eCLIP22.92■■□□□ 1.26
TSKU-202ENST00000525167 COL11A2P13942 1736 aaPredicted RBP22.91■■□□□ 1.26
TSKU-202ENST00000525167 DZIP3Q86Y13 1208 aaKnown RBP22.91■■□□□ 1.26
TSKU-202ENST00000525167 RTF1Q92541 710 aaKnown RBP22.91■■□□□ 1.26
TSKU-202ENST00000525167 KLRG1Q96E93 195 aa22.91■■□□□ 1.26
TSKU-202ENST00000525167 LTBP3Q9NS15 1303 aa22.9■■□□□ 1.26
TSKU-202ENST00000525167 RGL2O15211 777 aa22.9■■□□□ 1.26
TSKU-202ENST00000525167 ST5P78524 1137 aa22.9■■□□□ 1.26
TSKU-202ENST00000525167 CLEC4GQ6UXB4 293 aa22.9■■□□□ 1.26
TSKU-202ENST00000525167 JMYQ8N9B5 988 aa22.9■■□□□ 1.26
TSKU-202ENST00000525167 KCNQ3O43525 872 aa22.89■■□□□ 1.25
TSKU-202ENST00000525167 HTATSF1O43719 755 aaKnown RBP22.89■■□□□ 1.25
TSKU-202ENST00000525167 SNRPA1P09661 255 aaKnown RBP22.89■■□□□ 1.25
TSKU-202ENST00000525167 U2AF1L5P0DN76 240 aaPredicted RBP22.89■■□□□ 1.25
TSKU-202ENST00000525167 PPP2R1AP30153 589 aa22.89■■□□□ 1.25
TSKU-202ENST00000525167 U2AF1Q01081 240 aaKnown RBP eCLIP22.89■■□□□ 1.25
TSKU-202ENST00000525167 STYK1Q6J9G0 422 aa22.89■■□□□ 1.25
TSKU-202ENST00000525167 CNKSR1Q969H4 720 aa22.89■■□□□ 1.25
TSKU-202ENST00000525167 FER1L6Q2WGJ9 1857 aa22.88■■□□□ 1.25
TSKU-202ENST00000525167 NPHP1O15259 732 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms