RNA–Protein interactions for RNA: ENST00000525076.5

CTSB-208, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-208ENST00000525076 NARFQ9UHQ1 456 aa20.52■□□□□ 0.88
CTSB-208ENST00000525076 KCPQ6ZWJ8 1503 aa20.52■□□□□ 0.87
CTSB-208ENST00000525076 COL15A1P39059 1388 aa20.51■□□□□ 0.87
CTSB-208ENST00000525076 TTC5Q8N0Z6 440 aa20.51■□□□□ 0.87
CTSB-208ENST00000525076 ZBTB1Q9Y2K1 713 aa20.51■□□□□ 0.87
CTSB-208ENST00000525076 APLP1P51693 650 aa20.5■□□□□ 0.87
CTSB-208ENST00000525076 NMRK2Q9NPI5 230 aa20.5■□□□□ 0.87
CTSB-208ENST00000525076 U2SURPO15042 1029 aaKnown RBP20.48■□□□□ 0.87
CTSB-208ENST00000525076 NFIXQ14938 502 aa20.48■□□□□ 0.87
CTSB-208ENST00000525076 C16orf71Q8IYS4 520 aaPredicted RBP20.48■□□□□ 0.87
CTSB-208ENST00000525076 RNF181Q9P0P0 153 aa20.48■□□□□ 0.87
CTSB-208ENST00000525076 AFDNP55196 1824 aaKnown RBP20.48■□□□□ 0.87
CTSB-208ENST00000525076 STARD3NLO95772 234 aa20.47■□□□□ 0.87
CTSB-208ENST00000525076 CANXP27824 592 aaKnown RBP20.47■□□□□ 0.87
CTSB-208ENST00000525076 CNGB1Q14028 1251 aaPredicted RBP20.47■□□□□ 0.87
CTSB-208ENST00000525076 IFFO2Q5TF58 517 aa20.47■□□□□ 0.87
CTSB-208ENST00000525076 KDM2BQ8NHM5 1336 aa20.47■□□□□ 0.87
CTSB-208ENST00000525076 UBR2Q8IWV8 1755 aa20.46■□□□□ 0.87
CTSB-208ENST00000525076 TEFQ10587 303 aa20.46■□□□□ 0.87
CTSB-208ENST00000525076 GAS2L2Q8NHY3 880 aa20.46■□□□□ 0.87
CTSB-208ENST00000525076 NPC1L1Q9UHC9 1359 aa20.46■□□□□ 0.87
CTSB-208ENST00000525076 A0A087WZG4 1122 aa20.45■□□□□ 0.86
CTSB-208ENST00000525076 SERPINB2P05120 415 aa20.45■□□□□ 0.86
CTSB-208ENST00000525076 NRXN2Q9P2S2 1712 aa20.44■□□□□ 0.86
CTSB-208ENST00000525076 SBF1O95248 1867 aa20.44■□□□□ 0.86
CTSB-208ENST00000525076 GNAT3A8MTJ3 354 aa20.44■□□□□ 0.86
CTSB-208ENST00000525076 RBM46Q8TBY0 533 aaKnown RBP20.44■□□□□ 0.86
CTSB-208ENST00000525076 BCL2L12Q9HB09 334 aa20.44■□□□□ 0.86
CTSB-208ENST00000525076 COL3A1P02461 1466 aaPredicted RBP20.43■□□□□ 0.86
CTSB-208ENST00000525076 TEX13AQ9BXU3 409 aaPredicted RBP20.43■□□□□ 0.86
CTSB-208ENST00000525076 EIF5P55010 431 aaKnown RBP20.42■□□□□ 0.86
CTSB-208ENST00000525076 ZNF790Q6PG37 636 aa20.42■□□□□ 0.86
CTSB-208ENST00000525076 BICDL1Q6ZP65 573 aa20.41■□□□□ 0.86
CTSB-208ENST00000525076 NPM2Q86SE8 214 aaKnown RBP20.41■□□□□ 0.86
CTSB-208ENST00000525076 TTLL6Q8N841 843 aa20.41■□□□□ 0.86
CTSB-208ENST00000525076 IL17REQ8NFR9 667 aa20.41■□□□□ 0.86
CTSB-208ENST00000525076 ZNF496Q96IT1 587 aaPredicted RBP20.41■□□□□ 0.86
CTSB-208ENST00000525076 HEG1Q9ULI3 1381 aa20.41■□□□□ 0.86
CTSB-208ENST00000525076 DLEC1Q9Y238 1755 aa20.41■□□□□ 0.86
CTSB-208ENST00000525076 H0YIN7 160 aa20.4■□□□□ 0.86
CTSB-208ENST00000525076 C2CD5Q86YS7 1000 aa20.4■□□□□ 0.86
CTSB-208ENST00000525076 RRAGCQ9HB90 399 aa20.4■□□□□ 0.86
CTSB-208ENST00000525076 ZC3H4Q9UPT8 1303 aaKnown RBP20.4■□□□□ 0.86
CTSB-208ENST00000525076 ZNF330Q9Y3S2 320 aaPredicted RBP20.4■□□□□ 0.86
CTSB-208ENST00000525076 TNRC6CQ9HCJ0 1690 aaKnown RBP20.39■□□□□ 0.86
CTSB-208ENST00000525076 RASSF7Q02833 373 aa20.39■□□□□ 0.85
CTSB-208ENST00000525076 FSTL1Q12841 308 aa20.39■□□□□ 0.85
CTSB-208ENST00000525076 CFAP53Q96M91 514 aa20.39■□□□□ 0.85
CTSB-208ENST00000525076 FMNL2Q96PY5 1086 aa20.39■□□□□ 0.85
CTSB-208ENST00000525076 SIPA1L3O60292 1781 aaPredicted RBP20.39■□□□□ 0.85
CTSB-208ENST00000525076 LMNB1P20700 586 aa20.38■□□□□ 0.85
CTSB-208ENST00000525076 IL6STP40189 918 aaPredicted RBP20.37■□□□□ 0.85
CTSB-208ENST00000525076 TBC1D9BQ66K14 1250 aa20.37■□□□□ 0.85
CTSB-208ENST00000525076 PDZRN3Q9UPQ7 1066 aa20.37■□□□□ 0.85
CTSB-208ENST00000525076 WDR90Q96KV7 1748 aa20.36■□□□□ 0.85
CTSB-208ENST00000525076 CARMIL3Q8ND23 1372 aa20.36■□□□□ 0.85
CTSB-208ENST00000525076 DNAJC5GQ8N7S2 189 aa20.36■□□□□ 0.85
CTSB-208ENST00000525076 TBC1D2BQ9UPU7 963 aa20.36■□□□□ 0.85
CTSB-208ENST00000525076 SCN7AQ01118 1682 aa20.35■□□□□ 0.85
CTSB-208ENST00000525076 BTBD11A6QL63 1104 aa20.35■□□□□ 0.85
CTSB-208ENST00000525076 PRKAR2BP31323 418 aa20.35■□□□□ 0.85
CTSB-208ENST00000525076 PDE6BP35913 854 aa20.35■□□□□ 0.85
CTSB-208ENST00000525076 NUDCQ9Y266 331 aa20.35■□□□□ 0.85
CTSB-208ENST00000525076 CEMIPQ8WUJ3 1361 aa20.34■□□□□ 0.85
CTSB-208ENST00000525076 ZNF622Q969S3 477 aaKnown RBP eCLIP20.34■□□□□ 0.85
CTSB-208ENST00000525076 PHACTR3Q96KR7 559 aa20.34■□□□□ 0.85
CTSB-208ENST00000525076 BRIP1Q9BX63 1249 aa20.34■□□□□ 0.85
CTSB-208ENST00000525076 CCDC88AQ3V6T2 1871 aa20.33■□□□□ 0.85
CTSB-208ENST00000525076 NPHP1O15259 732 aa20.33■□□□□ 0.85
CTSB-208ENST00000525076 A1BGP04217 495 aa20.33■□□□□ 0.85
CTSB-208ENST00000525076 SMC1BQ8NDV3 1235 aa20.33■□□□□ 0.85
CTSB-208ENST00000525076 SETDB2Q96T68 719 aa20.33■□□□□ 0.85
CTSB-208ENST00000525076 RSPH6AQ9H0K4 717 aa20.33■□□□□ 0.85
CTSB-208ENST00000525076 GLTPD2A6NH11 291 aa20.32■□□□□ 0.84
CTSB-208ENST00000525076 PRR5LQ6MZQ0 368 aa20.32■□□□□ 0.84
CTSB-208ENST00000525076 ANKRD31Q8N7Z5 1873 aa20.32■□□□□ 0.84
CTSB-208ENST00000525076 VEGFAP15692 232 aaPredicted RBP20.31■□□□□ 0.84
CTSB-208ENST00000525076 RTF1Q92541 710 aaKnown RBP20.31■□□□□ 0.84
CTSB-208ENST00000525076 TIAM2Q8IVF5 1701 aa20.3■□□□□ 0.84
CTSB-208ENST00000525076 NFKBIEO00221 500 aa20.3■□□□□ 0.84
CTSB-208ENST00000525076 KCNQ3O43525 872 aa20.3■□□□□ 0.84
CTSB-208ENST00000525076 U2AF1L5P0DN76 240 aaPredicted RBP20.3■□□□□ 0.84
CTSB-208ENST00000525076 PRELPP51888 382 aa20.3■□□□□ 0.84
CTSB-208ENST00000525076 ST5P78524 1137 aa20.3■□□□□ 0.84
CTSB-208ENST00000525076 HTRA3P83110 453 aa20.3■□□□□ 0.84
CTSB-208ENST00000525076 U2AF1Q01081 240 aaKnown RBP eCLIP20.3■□□□□ 0.84
CTSB-208ENST00000525076 CCDC24Q8N4L8 307 aa20.3■□□□□ 0.84
CTSB-208ENST00000525076 CNBD1Q8NA66 436 aa20.3■□□□□ 0.84
CTSB-208ENST00000525076 KLRG1Q96E93 195 aa20.3■□□□□ 0.84
CTSB-208ENST00000525076 CAMTA2O94983 1202 aa20.29■□□□□ 0.84
CTSB-208ENST00000525076 DPY19L2Q6NUT2 758 aa20.29■□□□□ 0.84
CTSB-208ENST00000525076 DZIP3Q86Y13 1208 aaKnown RBP20.29■□□□□ 0.84
CTSB-208ENST00000525076 ZNF219Q9P2Y4 722 aaPredicted RBP20.29■□□□□ 0.84
CTSB-208ENST00000525076 C21orf2O43822 256 aa20.28■□□□□ 0.84
CTSB-208ENST00000525076 USP16Q9Y5T5 823 aa20.28■□□□□ 0.84
CTSB-208ENST00000525076 BCORQ6W2J9 1755 aa20.27■□□□□ 0.84
CTSB-208ENST00000525076 CNKSR1Q969H4 720 aa20.27■□□□□ 0.84
CTSB-208ENST00000525076 COL11A2P13942 1736 aaPredicted RBP20.27■□□□□ 0.83
CTSB-208ENST00000525076 SNRPA1P09661 255 aaKnown RBP20.26■□□□□ 0.83
CTSB-208ENST00000525076 PPP2R1AP30153 589 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms