RNA–Protein interactions for RNA: ENST00000524657.1

KDM2A-204, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 3,692 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-204ENST00000524657 FOSBP53539 338 aa11.56□□□□□ -0.56
KDM2A-204ENST00000524657 EFCAB2Q5VUJ9 269 aa11.56□□□□□ -0.56
KDM2A-204ENST00000524657 CWC27Q6UX04 472 aaKnown RBP11.56□□□□□ -0.56
KDM2A-204ENST00000524657 KRBA2Q6ZNG9 492 aa11.56□□□□□ -0.56
KDM2A-204ENST00000524657 TMEM87AQ8NBN3 555 aa11.56□□□□□ -0.56
KDM2A-204ENST00000524657 TOMM22Q9NS69 142 aa11.56□□□□□ -0.56
KDM2A-204ENST00000524657 MAST1Q9Y2H9 1570 aa11.55□□□□□ -0.56
KDM2A-204ENST00000524657 SLU7O95391 586 aaKnown RBP11.55□□□□□ -0.56
KDM2A-204ENST00000524657 LIMCH1Q9UPQ0 1083 aa11.55□□□□□ -0.56
KDM2A-204ENST00000524657 A0A1W2PP64 1363 aa11.55□□□□□ -0.56
KDM2A-204ENST00000524657 TRAPPC8Q9Y2L5 1435 aa11.55□□□□□ -0.56
KDM2A-204ENST00000524657 BMS1Q14692 1282 aaKnown RBP11.55□□□□□ -0.56
KDM2A-204ENST00000524657 SYCP1Q15431 976 aa11.55□□□□□ -0.56
KDM2A-204ENST00000524657 LARP1BQ659C4 914 aaKnown RBP11.55□□□□□ -0.56
KDM2A-204ENST00000524657 LRRCC1Q9C099 1032 aa11.55□□□□□ -0.56
KDM2A-204ENST00000524657 STAG3Q9UJ98 1225 aa11.55□□□□□ -0.56
KDM2A-204ENST00000524657 RAD50Q92878 1312 aa11.55□□□□□ -0.56
KDM2A-204ENST00000524657 BRPF1P55201 1214 aaPredicted RBP11.55□□□□□ -0.56
KDM2A-204ENST00000524657 ARHGAP29Q52LW3 1261 aa11.55□□□□□ -0.56
KDM2A-204ENST00000524657 NCBP3Q53F19 620 aaKnown RBP11.55□□□□□ -0.56
KDM2A-204ENST00000524657 SYT10Q6XYQ8 523 aa11.55□□□□□ -0.56
KDM2A-204ENST00000524657 ERCC4Q92889 916 aaPredicted RBP11.55□□□□□ -0.56
KDM2A-204ENST00000524657 MTMR6Q9Y217 621 aa11.55□□□□□ -0.56
KDM2A-204ENST00000524657 PTCH1Q13635 1447 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 RTL1A6NKG5 1358 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 MCM10Q7L590 875 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 RGS12O14924 1447 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 CCDC69A6NI79 296 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 BECN2A8MW95 431 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 SEC31AO94979 1220 aaKnown RBP11.54□□□□□ -0.56
KDM2A-204ENST00000524657 CYP2C19P33261 490 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 ST5P78524 1137 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 ERO1AQ96HE7 468 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 CCDC34Q96HJ3 373 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 IQGAP3Q86VI3 1631 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 TULP2O00295 520 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 HTATSF1O43719 755 aaKnown RBP11.54□□□□□ -0.56
KDM2A-204ENST00000524657 CLCN6P51797 869 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 ANAPC15P60006 121 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 KRT85P78386 507 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 STK3Q13188 491 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 G2E3Q7L622 706 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 LRRC8AQ8IWT6 810 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 EPC1Q9H2F5 836 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 SNX14Q9Y5W7 946 aa11.54□□□□□ -0.56
KDM2A-204ENST00000524657 UNC13BO14795 1591 aa11.53□□□□□ -0.56
KDM2A-204ENST00000524657 HOMER1Q86YM7 354 aa11.53□□□□□ -0.56
KDM2A-204ENST00000524657 FAM177A1Q8N128 213 aaPredicted RBP11.53□□□□□ -0.56
KDM2A-204ENST00000524657 JAKMIP1Q96N16 626 aaKnown RBP11.53□□□□□ -0.56
KDM2A-204ENST00000524657 TERF2IPQ9NYB0 399 aa11.53□□□□□ -0.56
KDM2A-204ENST00000524657 TEX35Q5T0J7 233 aa11.53□□□□□ -0.56
KDM2A-204ENST00000524657 LRRFIP2Q9Y608 721 aaKnown RBP11.53□□□□□ -0.56
KDM2A-204ENST00000524657 PIK3R4Q99570 1358 aa11.53□□□□□ -0.56
KDM2A-204ENST00000524657 PNMA6EA0A0J9YXQ4 647 aa11.53□□□□□ -0.56
KDM2A-204ENST00000524657 CDC37L1Q7L3B6 337 aa11.53□□□□□ -0.56
KDM2A-204ENST00000524657 CCDC191Q8NCU4 936 aa11.53□□□□□ -0.56
KDM2A-204ENST00000524657 SPATA32Q96LK8 384 aa11.53□□□□□ -0.56
KDM2A-204ENST00000524657 CABP1Q9NZU7 370 aa11.53□□□□□ -0.56
KDM2A-204ENST00000524657 NR1I2O75469 434 aa11.52□□□□□ -0.56
KDM2A-204ENST00000524657 SKIDA1Q1XH10 827 aa11.52□□□□□ -0.56
KDM2A-204ENST00000524657 GGT6Q6P531 493 aa11.52□□□□□ -0.56
KDM2A-204ENST00000524657 LCMT1Q9UIC8 334 aa11.52□□□□□ -0.56
KDM2A-204ENST00000524657 ATP10DQ9P241 1426 aa11.52□□□□□ -0.57
KDM2A-204ENST00000524657 PNMA6AP0CW24 399 aaPredicted RBP11.52□□□□□ -0.57
KDM2A-204ENST00000524657 RRS1Q15050 365 aaKnown RBP11.52□□□□□ -0.57
KDM2A-204ENST00000524657 FMNL2Q96PY5 1086 aa11.52□□□□□ -0.57
KDM2A-204ENST00000524657 CLTCL1P53675 1640 aa11.52□□□□□ -0.57
KDM2A-204ENST00000524657 DUOX2Q9NRD8 1548 aa11.52□□□□□ -0.57
KDM2A-204ENST00000524657 GNL2Q13823 731 aaKnown RBP11.51□□□□□ -0.57
KDM2A-204ENST00000524657 C14orf93Q9H972 538 aaKnown RBP11.51□□□□□ -0.57
KDM2A-204ENST00000524657 POLKQ9UBT6 870 aa11.51□□□□□ -0.57
KDM2A-204ENST00000524657 PPFIA3O75145 1194 aa11.51□□□□□ -0.57
KDM2A-204ENST00000524657 HSPA4P34932 840 aa11.51□□□□□ -0.57
KDM2A-204ENST00000524657 PRPF40BQ6NWY9 871 aaKnown RBP11.51□□□□□ -0.57
KDM2A-204ENST00000524657 C14orf37Q86TY3 774 aa11.51□□□□□ -0.57
KDM2A-204ENST00000524657 DDX11Q96FC9 970 aa11.51□□□□□ -0.57
KDM2A-204ENST00000524657 RASSF4Q9H2L5 321 aa11.51□□□□□ -0.57
KDM2A-204ENST00000524657 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.51□□□□□ -0.57
KDM2A-204ENST00000524657 ADGRL1O94910 1474 aa11.51□□□□□ -0.57
KDM2A-204ENST00000524657 PLA2G4DQ86XP0 818 aa11.51□□□□□ -0.57
KDM2A-204ENST00000524657 SMARCE1Q969G3 411 aa11.51□□□□□ -0.57
KDM2A-204ENST00000524657 PDRG1Q9NUG6 133 aa11.51□□□□□ -0.57
KDM2A-204ENST00000524657 PLA2G4AP47712 749 aa11.5□□□□□ -0.57
KDM2A-204ENST00000524657 SNW1Q13573 536 aaKnown RBP11.5□□□□□ -0.57
KDM2A-204ENST00000524657 ADCK5Q3MIX3 580 aa11.5□□□□□ -0.57
KDM2A-204ENST00000524657 TMCO3Q6UWJ1 677 aa11.5□□□□□ -0.57
KDM2A-204ENST00000524657 HDGFL2Q7Z4V5 671 aaPredicted RBP11.5□□□□□ -0.57
KDM2A-204ENST00000524657 ZRANB1Q9UGI0 708 aa11.5□□□□□ -0.57
KDM2A-204ENST00000524657 FHOD1Q9Y613 1164 aa11.5□□□□□ -0.57
KDM2A-204ENST00000524657 ABCA8O94911 1581 aa11.5□□□□□ -0.57
KDM2A-204ENST00000524657 CCDC171Q6TFL3 1326 aa11.5□□□□□ -0.57
KDM2A-204ENST00000524657 CCAR2Q8N163 923 aaKnown RBP11.5□□□□□ -0.57
KDM2A-204ENST00000524657 ADGRB2O60241 1585 aa11.5□□□□□ -0.57
KDM2A-204ENST00000524657 ANKRD65E5RJM6 399 aa11.5□□□□□ -0.57
KDM2A-204ENST00000524657 GNAI2P04899 355 aa11.5□□□□□ -0.57
KDM2A-204ENST00000524657 UBXN4Q92575 508 aa11.5□□□□□ -0.57
KDM2A-204ENST00000524657 LMAN1P49257 510 aa11.49□□□□□ -0.57
KDM2A-204ENST00000524657 C11orf57Q6ZUT1 292 aaPredicted RBP11.49□□□□□ -0.57
KDM2A-204ENST00000524657 KIF1BPQ96EK5 621 aa11.49□□□□□ -0.57
KDM2A-204ENST00000524657 GTF2A1P52655 376 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms