RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 MRC1P22897 1456 aa10.87□□□□□ -0.67
PKP3-202ENST00000524646 PKD1L3Q7Z443 1732 aa10.87□□□□□ -0.67
PKP3-202ENST00000524646 ERBB4Q15303 1308 aa10.86□□□□□ -0.67
PKP3-202ENST00000524646 RAD50Q92878 1312 aa10.86□□□□□ -0.67
PKP3-202ENST00000524646 ARFGEF2Q9Y6D5 1785 aa10.86□□□□□ -0.67
PKP3-202ENST00000524646 MBD3O95983 291 aa10.86□□□□□ -0.67
PKP3-202ENST00000524646 ZSCAN23Q3MJ62 389 aa10.86□□□□□ -0.67
PKP3-202ENST00000524646 NUTM2GQ5VZR2 741 aa10.86□□□□□ -0.67
PKP3-202ENST00000524646 CAVIN1Q6NZI2 390 aaKnown RBP10.86□□□□□ -0.67
PKP3-202ENST00000524646 IP6K1Q92551 441 aa10.86□□□□□ -0.67
PKP3-202ENST00000524646 NECTIN2Q92692 538 aa10.86□□□□□ -0.67
PKP3-202ENST00000524646 LTV1Q96GA3 475 aaPredicted RBP10.86□□□□□ -0.67
PKP3-202ENST00000524646 INTS4Q96HW7 963 aaKnown RBP10.86□□□□□ -0.67
PKP3-202ENST00000524646 USP44Q9H0E7 712 aa10.86□□□□□ -0.67
PKP3-202ENST00000524646 ANO2Q9NQ90 1003 aa10.86□□□□□ -0.67
PKP3-202ENST00000524646 PALD1Q9ULE6 856 aa10.86□□□□□ -0.67
PKP3-202ENST00000524646 USP42Q9H9J4 1324 aaKnown RBP10.85□□□□□ -0.67
PKP3-202ENST00000524646 TRIM6-TRIM34B2RNG4 842 aa10.85□□□□□ -0.67
PKP3-202ENST00000524646 BRD1O95696 1058 aa10.85□□□□□ -0.67
PKP3-202ENST00000524646 NEK4P51957 841 aa10.85□□□□□ -0.67
PKP3-202ENST00000524646 USHBP1Q8N6Y0 703 aa10.85□□□□□ -0.67
PKP3-202ENST00000524646 ANP32BQ92688 251 aaKnown RBP10.85□□□□□ -0.67
PKP3-202ENST00000524646 RILPL2Q969X0 211 aa10.85□□□□□ -0.67
PKP3-202ENST00000524646 ADCY9O60503 1353 aa10.85□□□□□ -0.67
PKP3-202ENST00000524646 MYH15Q9Y2K3 1946 aa10.84□□□□□ -0.67
PKP3-202ENST00000524646 EIF4A1P60842 406 aaKnown RBP10.84□□□□□ -0.67
PKP3-202ENST00000524646 PI4K2BQ8TCG2 481 aa10.84□□□□□ -0.67
PKP3-202ENST00000524646 DNAAF4Q8WXU2 420 aa10.84□□□□□ -0.67
PKP3-202ENST00000524646 KIF1BPQ96EK5 621 aa10.84□□□□□ -0.67
PKP3-202ENST00000524646 COL18A1P39060 1754 aa10.83□□□□□ -0.68
PKP3-202ENST00000524646 GLI3P10071 1580 aa10.83□□□□□ -0.68
PKP3-202ENST00000524646 RPAP1Q9BWH6 1393 aaPredicted RBP10.83□□□□□ -0.68
PKP3-202ENST00000524646 HSPA4P34932 840 aa10.83□□□□□ -0.68
PKP3-202ENST00000524646 HSP90AB4PQ58FF6 505 aa10.83□□□□□ -0.68
PKP3-202ENST00000524646 PPP1R42Q7Z4L9 355 aa10.83□□□□□ -0.68
PKP3-202ENST00000524646 C14orf37Q86TY3 774 aa10.83□□□□□ -0.68
PKP3-202ENST00000524646 UNC5CLQ8IV45 518 aa10.83□□□□□ -0.68
PKP3-202ENST00000524646 KCNH5Q8NCM2 988 aa10.83□□□□□ -0.68
PKP3-202ENST00000524646 RHPN1Q8TCX5 695 aa10.83□□□□□ -0.68
PKP3-202ENST00000524646 GPT2Q8TD30 523 aa10.83□□□□□ -0.68
PKP3-202ENST00000524646 PHAXQ9H814 394 aaKnown RBP10.83□□□□□ -0.68
PKP3-202ENST00000524646 IL1RAPL2Q9NP60 686 aa10.83□□□□□ -0.68
PKP3-202ENST00000524646 CHPF2Q9P2E5 772 aa10.83□□□□□ -0.68
PKP3-202ENST00000524646 MST1RQ04912 1400 aa10.83□□□□□ -0.68
PKP3-202ENST00000524646 PRPF40AO75400 957 aaKnown RBP10.82□□□□□ -0.68
PKP3-202ENST00000524646 SURF6O75683 361 aaKnown RBP10.82□□□□□ -0.68
PKP3-202ENST00000524646 NCLP19338 710 aaKnown RBP10.82□□□□□ -0.68
PKP3-202ENST00000524646 MTX1Q13505 466 aa10.82□□□□□ -0.68
PKP3-202ENST00000524646 AKAP4Q5JQC9 854 aa10.82□□□□□ -0.68
PKP3-202ENST00000524646 BEND3Q5T5X7 828 aa10.82□□□□□ -0.68
PKP3-202ENST00000524646 ZNF530Q6P9A1 599 aaPredicted RBP10.82□□□□□ -0.68
PKP3-202ENST00000524646 NUTM1Q86Y26 1132 aa10.82□□□□□ -0.68
PKP3-202ENST00000524646 CNTROBQ8N137 903 aa10.82□□□□□ -0.68
PKP3-202ENST00000524646 NAP1L5Q96NT1 182 aaPredicted RBP10.82□□□□□ -0.68
PKP3-202ENST00000524646 TTC41PQ6P2S7 1318 aa10.82□□□□□ -0.68
PKP3-202ENST00000524646 NUP188Q5SRE5 1749 aa10.81□□□□□ -0.68
PKP3-202ENST00000524646 HEG1Q9ULI3 1381 aa10.81□□□□□ -0.68
PKP3-202ENST00000524646 SGSM2O43147 1006 aa10.81□□□□□ -0.68
PKP3-202ENST00000524646 SRGAP3O43295 1099 aa10.81□□□□□ -0.68
PKP3-202ENST00000524646 ALDH1L1O75891 902 aa10.81□□□□□ -0.68
PKP3-202ENST00000524646 TEFQ10587 303 aa10.81□□□□□ -0.68
PKP3-202ENST00000524646 RBM27Q9P2N5 1060 aaKnown RBP10.81□□□□□ -0.68
PKP3-202ENST00000524646 NPHP4O75161 1426 aaPredicted RBP10.81□□□□□ -0.68
PKP3-202ENST00000524646 WDR33Q9C0J8 1336 aaKnown RBP10.81□□□□□ -0.68
PKP3-202ENST00000524646 LAMA4Q16363 1823 aa10.8□□□□□ -0.68
PKP3-202ENST00000524646 PLEKHG5O94827 1062 aa10.8□□□□□ -0.68
PKP3-202ENST00000524646 AMOTQ4VCS5 1084 aa10.8□□□□□ -0.68
PKP3-202ENST00000524646 PLEKHO1Q53GL0 409 aaPredicted RBP10.8□□□□□ -0.68
PKP3-202ENST00000524646 HS1BP3Q53T59 392 aa10.8□□□□□ -0.68
PKP3-202ENST00000524646 NBPF6Q5VWK0 638 aa10.8□□□□□ -0.68
PKP3-202ENST00000524646 LRSAM1Q6UWE0 723 aa10.8□□□□□ -0.68
PKP3-202ENST00000524646 ZSCAN30Q86W11 494 aa10.8□□□□□ -0.68
PKP3-202ENST00000524646 SYAP1Q96A49 352 aaPredicted RBP10.8□□□□□ -0.68
PKP3-202ENST00000524646 PDLIM2Q96JY6 352 aa10.8□□□□□ -0.68
PKP3-202ENST00000524646 NBPF4Q96M43 638 aa10.8□□□□□ -0.68
PKP3-202ENST00000524646 RBSNQ9H1K0 784 aa10.8□□□□□ -0.68
PKP3-202ENST00000524646 IL25Q9H293 177 aa10.8□□□□□ -0.68
PKP3-202ENST00000524646 TMEM63CQ9P1W3 806 aa10.8□□□□□ -0.68
PKP3-202ENST00000524646 TJP1Q07157 1748 aa10.8□□□□□ -0.68
PKP3-202ENST00000524646 GLRX3O76003 335 aaKnown RBP10.79□□□□□ -0.68
PKP3-202ENST00000524646 EIF2S2P20042 333 aaKnown RBP10.79□□□□□ -0.68
PKP3-202ENST00000524646 NOL8Q76FK4 1167 aaKnown RBP10.79□□□□□ -0.68
PKP3-202ENST00000524646 ERC1Q8IUD2 1116 aa10.79□□□□□ -0.68
PKP3-202ENST00000524646 TMEM87AQ8NBN3 555 aa10.79□□□□□ -0.68
PKP3-202ENST00000524646 GPATCH3Q96I76 525 aa10.79□□□□□ -0.68
PKP3-202ENST00000524646 UPF3BQ9BZI7 483 aaKnown RBP10.79□□□□□ -0.68
PKP3-202ENST00000524646 LSG1Q9H089 658 aaKnown RBP10.79□□□□□ -0.68
PKP3-202ENST00000524646 HDAC5Q9UQL6 1122 aa10.79□□□□□ -0.68
PKP3-202ENST00000524646 UBR2Q8IWV8 1755 aa10.79□□□□□ -0.68
PKP3-202ENST00000524646 PLEKHG2Q9H7P9 1386 aa10.78□□□□□ -0.68
PKP3-202ENST00000524646 PAPPAQ13219 1627 aa10.78□□□□□ -0.68
PKP3-202ENST00000524646 PI4KAP2A4QPH2 592 aa10.78□□□□□ -0.68
PKP3-202ENST00000524646 BTBD11A6QL63 1104 aa10.78□□□□□ -0.68
PKP3-202ENST00000524646 RNMTO43148 476 aaKnown RBP10.78□□□□□ -0.68
PKP3-202ENST00000524646 NBPF7P0C2Y1 421 aaPredicted RBP10.78□□□□□ -0.68
PKP3-202ENST00000524646 PRIM1P49642 420 aaKnown RBP10.78□□□□□ -0.68
PKP3-202ENST00000524646 C1orf141Q5JVX7 400 aa10.78□□□□□ -0.68
PKP3-202ENST00000524646 PI4KAP1Q8N8J0 262 aa10.78□□□□□ -0.68
PKP3-202ENST00000524646 TTC14Q96N46 770 aa10.78□□□□□ -0.68
PKP3-202ENST00000524646 LGR6Q9HBX8 967 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms