RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 RDH13Q8NBN7 331 aa9.79□□□□□ -0.84
CTR9-202ENST00000524523 MYH16Q9H6N6 1097 aa9.79□□□□□ -0.84
CTR9-202ENST00000524523 RIMS1Q86UR5 1692 aaKnown RBP9.79□□□□□ -0.84
CTR9-202ENST00000524523 NPHP4O75161 1426 aaPredicted RBP9.79□□□□□ -0.84
CTR9-202ENST00000524523 NKTRP30414 1462 aaKnown RBP9.79□□□□□ -0.84
CTR9-202ENST00000524523 CDK12Q9NYV4 1490 aaPredicted RBP9.79□□□□□ -0.84
CTR9-202ENST00000524523 SHPRHQ149N8 1683 aa9.78□□□□□ -0.84
CTR9-202ENST00000524523 SLC10A3P09131 477 aa9.78□□□□□ -0.84
CTR9-202ENST00000524523 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.78□□□□□ -0.84
CTR9-202ENST00000524523 ZNF428Q96B54 188 aa9.78□□□□□ -0.84
CTR9-202ENST00000524523 IQSEC2Q5JU85 1478 aa9.78□□□□□ -0.84
CTR9-202ENST00000524523 MON2Q7Z3U7 1717 aa9.77□□□□□ -0.85
CTR9-202ENST00000524523 MDM2Q00987 491 aaPredicted RBP9.77□□□□□ -0.85
CTR9-202ENST00000524523 MTRQ99707 1265 aa9.77□□□□□ -0.85
CTR9-202ENST00000524523 IL21Q9HBE4 155 aa9.77□□□□□ -0.85
CTR9-202ENST00000524523 SALL2Q9Y467 1007 aaPredicted RBP9.77□□□□□ -0.85
CTR9-202ENST00000524523 MAPK8IP3Q9UPT6 1336 aa9.77□□□□□ -0.85
CTR9-202ENST00000524523 TOPAZ1Q8N9V7 1692 aa9.77□□□□□ -0.85
CTR9-202ENST00000524523 AKAP12Q02952 1782 aa9.76□□□□□ -0.85
CTR9-202ENST00000524523 OVOS2A0A0J9YW53 1432 aa9.76□□□□□ -0.85
CTR9-202ENST00000524523 OVOS2Q6IE36 1432 aa9.76□□□□□ -0.85
CTR9-202ENST00000524523 IL13P35225 146 aa9.76□□□□□ -0.85
CTR9-202ENST00000524523 TMPOP42166 694 aaKnown RBP9.76□□□□□ -0.85
CTR9-202ENST00000524523 PDE3AQ14432 1141 aa9.76□□□□□ -0.85
CTR9-202ENST00000524523 TJAP1Q5JTD0 557 aa9.76□□□□□ -0.85
CTR9-202ENST00000524523 NME9Q86XW9 330 aa9.76□□□□□ -0.85
CTR9-202ENST00000524523 CCDC146Q8IYE0 955 aa9.76□□□□□ -0.85
CTR9-202ENST00000524523 NGDNQ8NEJ9 315 aaKnown RBP9.76□□□□□ -0.85
CTR9-202ENST00000524523 PCDHB3Q9Y5E6 796 aa9.76□□□□□ -0.85
CTR9-202ENST00000524523 LRRC7Q96NW7 1537 aa9.76□□□□□ -0.85
CTR9-202ENST00000524523 KIF20BQ96Q89 1820 aa9.75□□□□□ -0.85
CTR9-202ENST00000524523 ACTN4O43707 911 aaKnown RBP9.75□□□□□ -0.85
CTR9-202ENST00000524523 CLCN1P35523 988 aa9.75□□□□□ -0.85
CTR9-202ENST00000524523 LMOD3Q0VAK6 560 aa9.75□□□□□ -0.85
CTR9-202ENST00000524523 CHD2O14647 1828 aaKnown RBP9.75□□□□□ -0.85
CTR9-202ENST00000524523 ADGRL3Q9HAR2 1447 aa9.74□□□□□ -0.85
CTR9-202ENST00000524523 ITSN1Q15811 1721 aa9.74□□□□□ -0.85
CTR9-202ENST00000524523 U2SURPO15042 1029 aaKnown RBP9.74□□□□□ -0.85
CTR9-202ENST00000524523 MS4A1P11836 297 aa9.74□□□□□ -0.85
CTR9-202ENST00000524523 ERICH6Q7L0X2 663 aa9.74□□□□□ -0.85
CTR9-202ENST00000524523 AK7Q96M32 723 aa9.74□□□□□ -0.85
CTR9-202ENST00000524523 RSPH6AQ9H0K4 717 aa9.74□□□□□ -0.85
CTR9-202ENST00000524523 GPCPD1Q9NPB8 672 aa9.74□□□□□ -0.85
CTR9-202ENST00000524523 COPS2P61201 443 aa9.73□□□□□ -0.85
CTR9-202ENST00000524523 CCDC136Q96JN2 1154 aa9.73□□□□□ -0.85
CTR9-202ENST00000524523 C19orf44Q9H6X5 657 aa9.73□□□□□ -0.85
CTR9-202ENST00000524523 BRPF1P55201 1214 aaPredicted RBP9.72□□□□□ -0.85
CTR9-202ENST00000524523 NFE2L2Q16236 605 aa9.72□□□□□ -0.85
CTR9-202ENST00000524523 DCCP43146 1447 aa9.72□□□□□ -0.85
CTR9-202ENST00000524523 NWD1Q149M9 1564 aa9.71□□□□□ -0.85
CTR9-202ENST00000524523 NRKQ7Z2Y5 1582 aa9.71□□□□□ -0.85
CTR9-202ENST00000524523 GCGRP47871 477 aa9.71□□□□□ -0.86
CTR9-202ENST00000524523 RIPK4P57078 832 aa9.71□□□□□ -0.86
CTR9-202ENST00000524523 TTLL12Q14166 644 aaPredicted RBP9.71□□□□□ -0.86
CTR9-202ENST00000524523 EMILIN1Q9Y6C2 1016 aa9.71□□□□□ -0.86
CTR9-202ENST00000524523 SBNO1A3KN83 1393 aa9.71□□□□□ -0.86
CTR9-202ENST00000524523 MST1RQ04912 1400 aa9.71□□□□□ -0.86
CTR9-202ENST00000524523 HTATSF1O43719 755 aaKnown RBP9.7□□□□□ -0.86
CTR9-202ENST00000524523 RARSP54136 660 aaKnown RBP9.7□□□□□ -0.86
CTR9-202ENST00000524523 AMHR2Q16671 573 aa9.7□□□□□ -0.86
CTR9-202ENST00000524523 BLOC1S3Q6QNY0 202 aa9.7□□□□□ -0.86
CTR9-202ENST00000524523 KCNH5Q8NCM2 988 aa9.7□□□□□ -0.86
CTR9-202ENST00000524523 ZNF516Q92618 1163 aa9.7□□□□□ -0.86
CTR9-202ENST00000524523 FLT4P35916 1363 aa9.7□□□□□ -0.86
CTR9-202ENST00000524523 FMN2Q9NZ56 1722 aa9.7□□□□□ -0.86
CTR9-202ENST00000524523 A0A0G2JS52 829 aa9.69□□□□□ -0.86
CTR9-202ENST00000524523 RTL1A6NKG5 1358 aa9.69□□□□□ -0.86
CTR9-202ENST00000524523 TRIM66O15016 1216 aa9.69□□□□□ -0.86
CTR9-202ENST00000524523 CD46P15529 392 aa9.69□□□□□ -0.86
CTR9-202ENST00000524523 PRKAR2BP31323 418 aa9.69□□□□□ -0.86
CTR9-202ENST00000524523 GNAI1P63096 354 aa9.69□□□□□ -0.86
CTR9-202ENST00000524523 IRX6P78412 446 aaPredicted RBP9.69□□□□□ -0.86
CTR9-202ENST00000524523 ALDH1L2Q3SY69 923 aa9.69□□□□□ -0.86
CTR9-202ENST00000524523 USP54Q70EL1 1684 aa9.69□□□□□ -0.86
CTR9-202ENST00000524523 TMUB1Q9BVT8 246 aa9.69□□□□□ -0.86
CTR9-202ENST00000524523 SLC24A3Q9HC58 644 aa9.69□□□□□ -0.86
CTR9-202ENST00000524523 FAM217BQ9NTX9 383 aaPredicted RBP9.69□□□□□ -0.86
CTR9-202ENST00000524523 IFT57Q9NWB7 429 aa9.69□□□□□ -0.86
CTR9-202ENST00000524523 NALCNQ8IZF0 1738 aa9.68□□□□□ -0.86
CTR9-202ENST00000524523 ARHGEF10O15013 1369 aa9.68□□□□□ -0.86
CTR9-202ENST00000524523 PPM1GO15355 546 aaPredicted RBP9.68□□□□□ -0.86
CTR9-202ENST00000524523 ZPR1O75312 459 aa9.68□□□□□ -0.86
CTR9-202ENST00000524523 NR1I2O75469 434 aa9.68□□□□□ -0.86
CTR9-202ENST00000524523 EIF4A2Q14240 407 aaKnown RBP9.68□□□□□ -0.86
CTR9-202ENST00000524523 NEUROD2Q15784 382 aa9.68□□□□□ -0.86
CTR9-202ENST00000524523 PROSER2Q86WR7 435 aaPredicted RBP9.68□□□□□ -0.86
CTR9-202ENST00000524523 PMFBP1Q8TBY8 1022 aa9.68□□□□□ -0.86
CTR9-202ENST00000524523 KDRP35968 1356 aa9.67□□□□□ -0.86
CTR9-202ENST00000524523 ZNF853P0CG23 659 aa9.67□□□□□ -0.86
CTR9-202ENST00000524523 ATP6V1AP38606 617 aa9.67□□□□□ -0.86
CTR9-202ENST00000524523 RRS1Q15050 365 aaKnown RBP9.67□□□□□ -0.86
CTR9-202ENST00000524523 TMEM132AQ24JP5 1023 aa9.67□□□□□ -0.86
CTR9-202ENST00000524523 GRIPAP1Q4V328 841 aa9.67□□□□□ -0.86
CTR9-202ENST00000524523 ABTB2Q8N961 1025 aa9.67□□□□□ -0.86
CTR9-202ENST00000524523 EXOC6Q8TAG9 804 aa9.67□□□□□ -0.86
CTR9-202ENST00000524523 MAP2P11137 1827 aaKnown RBP9.67□□□□□ -0.86
CTR9-202ENST00000524523 MAP3K19Q56UN5 1328 aa9.66□□□□□ -0.86
CTR9-202ENST00000524523 IPO8O15397 1037 aaKnown RBP9.66□□□□□ -0.86
CTR9-202ENST00000524523 PSME1Q06323 249 aa9.66□□□□□ -0.86
CTR9-202ENST00000524523 FUT2Q10981 343 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms