RNA–Protein interactions for RNA: ENST00000524324.5

CA1-223, Transcript of carbonic anhydrase 1, human

TSL 2

Gene CA1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CA1-223	ENST00000524324	KRT24	Q2M2I5	525 aa		10.31	□□□□□ -0.76
CA1-223	ENST00000524324	TSR2	Q969E8	191 aa	Known RBP	10.31	□□□□□ -0.76
CA1-223	ENST00000524324	SLC4A9	Q96Q91	983 aa		10.31	□□□□□ -0.76
CA1-223	ENST00000524324	SIPA1L3	O60292	1781 aa	Predicted RBP	10.3	□□□□□ -0.76
CA1-223	ENST00000524324	EZH2	Q15910	746 aa	Known RBP	10.3	□□□□□ -0.76
CA1-223	ENST00000524324	ZNF790	Q6PG37	636 aa		10.3	□□□□□ -0.76
CA1-223	ENST00000524324	HS6ST3	Q8IZP7	471 aa		10.3	□□□□□ -0.76
CA1-223	ENST00000524324	MBIP	Q9NS73	344 aa		10.3	□□□□□ -0.76
CA1-223	ENST00000524324	NHS	Q6T4R5	1651 aa		10.3	□□□□□ -0.76
CA1-223	ENST00000524324	BTAF1	O14981	1849 aa		10.3	□□□□□ -0.76
CA1-223	ENST00000524324	ELL2	O00472	640 aa	Predicted RBP	10.29	□□□□□ -0.76
CA1-223	ENST00000524324	WDR63	Q8IWG1	891 aa		10.29	□□□□□ -0.76
CA1-223	ENST00000524324	ZNF496	Q96IT1	587 aa	Predicted RBP	10.29	□□□□□ -0.76
CA1-223	ENST00000524324	TSPYL4	Q9UJ04	414 aa		10.29	□□□□□ -0.76
CA1-223	ENST00000524324	EP400	Q96L91	3159 aa		10.29	□□□□□ -0.76
CA1-223	ENST00000524324	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.28	□□□□□ -0.76
CA1-223	ENST00000524324	EIF4A1	P60842	406 aa	Known RBP	10.28	□□□□□ -0.76
CA1-223	ENST00000524324	GOLGA2	Q08379	1002 aa		10.28	□□□□□ -0.76
CA1-223	ENST00000524324	SLFN5	Q08AF3	891 aa		10.28	□□□□□ -0.76
CA1-223	ENST00000524324	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.28	□□□□□ -0.76
CA1-223	ENST00000524324	ZFP91	Q96JP5	570 aa	Predicted RBP	10.28	□□□□□ -0.76
CA1-223	ENST00000524324	CAMKK2	Q96RR4	588 aa		10.28	□□□□□ -0.76
CA1-223	ENST00000524324	LRRC4B	Q9NT99	713 aa		10.28	□□□□□ -0.76
CA1-223	ENST00000524324	PCDHB8	Q9UN66	801 aa		10.28	□□□□□ -0.76
CA1-223	ENST00000524324	PCDHB13	Q9Y5F0	798 aa		10.28	□□□□□ -0.76
CA1-223	ENST00000524324	STK24	Q9Y6E0	443 aa		10.28	□□□□□ -0.76
CA1-223	ENST00000524324	MRC1	P22897	1456 aa		10.28	□□□□□ -0.76
CA1-223	ENST00000524324	TNS1	Q9HBL0	1735 aa	Known RBP	10.27	□□□□□ -0.76
CA1-223	ENST00000524324	PLSCR1	O15162	318 aa		10.27	□□□□□ -0.77
CA1-223	ENST00000524324	ATP6V1A	P38606	617 aa		10.27	□□□□□ -0.77
CA1-223	ENST00000524324	GNAI1	P63096	354 aa		10.27	□□□□□ -0.77
CA1-223	ENST00000524324	SF3B2	Q13435	895 aa	Known RBP	10.27	□□□□□ -0.77
CA1-223	ENST00000524324	ITPK1	Q13572	414 aa		10.27	□□□□□ -0.77
CA1-223	ENST00000524324	TXNRD1	Q16881	649 aa		10.27	□□□□□ -0.77
CA1-223	ENST00000524324	SMIM5	Q71RC9	77 aa		10.27	□□□□□ -0.77
CA1-223	ENST00000524324	TSPYL6	Q8N831	410 aa		10.27	□□□□□ -0.77
CA1-223	ENST00000524324	C8orf58	Q8NAV2	365 aa		10.27	□□□□□ -0.77
CA1-223	ENST00000524324	SPRYD3	Q8NCJ5	442 aa		10.27	□□□□□ -0.77
CA1-223	ENST00000524324	IFT57	Q9NWB7	429 aa		10.27	□□□□□ -0.77
CA1-223	ENST00000524324	USP16	Q9Y5T5	823 aa		10.27	□□□□□ -0.77
CA1-223	ENST00000524324	PALLD	Q8WX93	1383 aa		10.26	□□□□□ -0.77
CA1-223	ENST00000524324	LOC102724428	A0A0B4J2F2	783 aa		10.26	□□□□□ -0.77
CA1-223	ENST00000524324	SIK1	P57059	783 aa		10.26	□□□□□ -0.77
CA1-223	ENST00000524324	EXOSC9	Q06265	439 aa	Known RBP	10.26	□□□□□ -0.77
CA1-223	ENST00000524324	DNAJC10	Q8IXB1	793 aa		10.26	□□□□□ -0.77
CA1-223	ENST00000524324	TTC5	Q8N0Z6	440 aa		10.26	□□□□□ -0.77
CA1-223	ENST00000524324	NGEF	Q8N5V2	710 aa		10.26	□□□□□ -0.77
CA1-223	ENST00000524324	NECTIN2	Q92692	538 aa		10.26	□□□□□ -0.77
CA1-223	ENST00000524324	SMARCC1	Q92922	1105 aa	Predicted RBP	10.26	□□□□□ -0.77
CA1-223	ENST00000524324	TCERG1	O14776	1098 aa	Known RBP	10.25	□□□□□ -0.77
CA1-223	ENST00000524324	BAG6	P46379	1132 aa		10.25	□□□□□ -0.77
CA1-223	ENST00000524324	PIP4K2A	P48426	406 aa	Predicted RBP	10.25	□□□□□ -0.77
CA1-223	ENST00000524324	CALD1	Q05682	793 aa	Known RBP	10.25	□□□□□ -0.77
CA1-223	ENST00000524324	CCDC125	Q86Z20	511 aa		10.25	□□□□□ -0.77
CA1-223	ENST00000524324	TRMT2A	Q8IZ69	625 aa	Known RBP	10.25	□□□□□ -0.77
CA1-223	ENST00000524324	CCNL1	Q9UK58	526 aa	Predicted RBP	10.25	□□□□□ -0.77
CA1-223	ENST00000524324	IL16	Q14005	1332 aa		10.25	□□□□□ -0.77
CA1-223	ENST00000524324	FANCI	Q9NVI1	1328 aa		10.25	□□□□□ -0.77
CA1-223	ENST00000524324	KDM3B	Q7LBC6	1761 aa		10.24	□□□□□ -0.77
CA1-223	ENST00000524324	KCP	Q6ZWJ8	1503 aa		10.24	□□□□□ -0.77
CA1-223	ENST00000524324	GIGYF1	O75420	1035 aa	Predicted RBP	10.24	□□□□□ -0.77
CA1-223	ENST00000524324	EIF2S2	P20042	333 aa	Known RBP	10.24	□□□□□ -0.77
CA1-223	ENST00000524324	LINC00116	Q8NCU8	138 aa		10.24	□□□□□ -0.77
CA1-223	ENST00000524324	FMNL2	Q96PY5	1086 aa		10.24	□□□□□ -0.77
CA1-223	ENST00000524324	BABAM1	Q9NWV8	329 aa		10.24	□□□□□ -0.77
CA1-223	ENST00000524324	PAPPA	Q13219	1627 aa		10.24	□□□□□ -0.77
CA1-223	ENST00000524324	ZBED9	Q6R2W3	1325 aa		10.24	□□□□□ -0.77
CA1-223	ENST00000524324		E9PSI1	815 aa		10.23	□□□□□ -0.77
CA1-223	ENST00000524324	MAP3K13	O43283	966 aa		10.23	□□□□□ -0.77
CA1-223	ENST00000524324	A1BG	P04217	495 aa		10.23	□□□□□ -0.77
CA1-223	ENST00000524324	DUSP27	Q5VZP5	1158 aa		10.23	□□□□□ -0.77
CA1-223	ENST00000524324	PHF12	Q96QT6	1004 aa		10.23	□□□□□ -0.77
CA1-223	ENST00000524324	LY75	O60449	1722 aa		10.23	□□□□□ -0.77
CA1-223	ENST00000524324	HEG1	Q9ULI3	1381 aa		10.23	□□□□□ -0.77
CA1-223	ENST00000524324	UBR2	Q8IWV8	1755 aa		10.22	□□□□□ -0.77
CA1-223	ENST00000524324	VAMP4	O75379	141 aa		10.22	□□□□□ -0.77
CA1-223	ENST00000524324	SNRPA1	P09661	255 aa	Known RBP	10.22	□□□□□ -0.77
CA1-223	ENST00000524324	CYP19A1	P11511	503 aa	Predicted RBP	10.22	□□□□□ -0.77
CA1-223	ENST00000524324	INTS5	Q6P9B9	1019 aa	Known RBP	10.22	□□□□□ -0.77
CA1-223	ENST00000524324	AMIGO3	Q86WK7	504 aa		10.22	□□□□□ -0.77
CA1-223	ENST00000524324	MYH16	Q9H6N6	1097 aa		10.22	□□□□□ -0.77
CA1-223	ENST00000524324	ANXA1	P04083	346 aa		10.21	□□□□□ -0.77
CA1-223	ENST00000524324	PDAP1	Q13442	181 aa	Known RBP	10.21	□□□□□ -0.77
CA1-223	ENST00000524324	ZNF827	Q17R98	1081 aa		10.21	□□□□□ -0.77
CA1-223	ENST00000524324	C5	P01031	1676 aa		10.21	□□□□□ -0.78
CA1-223	ENST00000524324	TJP1	Q07157	1748 aa		10.21	□□□□□ -0.78
CA1-223	ENST00000524324	NBPF26	B4DH59	902 aa		10.2	□□□□□ -0.78
CA1-223	ENST00000524324	SOCS7	O14512	581 aa		10.2	□□□□□ -0.78
CA1-223	ENST00000524324	CANX	P27824	592 aa	Known RBP	10.2	□□□□□ -0.78
CA1-223	ENST00000524324	CRKL	P46109	303 aa	Known RBP	10.2	□□□□□ -0.78
CA1-223	ENST00000524324	PROSER3	Q2NL68	480 aa		10.2	□□□□□ -0.78
CA1-223	ENST00000524324	TWISTNB	Q3B726	338 aa	Predicted RBP	10.2	□□□□□ -0.78
CA1-223	ENST00000524324	SLC27A3	Q5K4L6	730 aa		10.2	□□□□□ -0.78
CA1-223	ENST00000524324	NBPF14	Q5TI25	921 aa		10.2	□□□□□ -0.78
CA1-223	ENST00000524324	NBPF10	Q6P3W6	841 aa	Known RBP	10.2	□□□□□ -0.78
CA1-223	ENST00000524324	VSIG10	Q8N0Z9	540 aa		10.2	□□□□□ -0.78
CA1-223	ENST00000524324	NBPF15	Q8N660	670 aa		10.2	□□□□□ -0.78
CA1-223	ENST00000524324	ZNF579	Q8NAF0	562 aa	Known RBP	10.2	□□□□□ -0.78
CA1-223	ENST00000524324	KIF12	Q96FN5	646 aa		10.2	□□□□□ -0.78
CA1-223	ENST00000524324	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms