RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 ZPR1O75312 459 aa12.89□□□□□ -0.35
PTPN12-216ENST00000523952 PTCD1O75127 700 aaKnown RBP12.88□□□□□ -0.35
PTPN12-216ENST00000523952 LMNB1P20700 586 aa12.88□□□□□ -0.35
PTPN12-216ENST00000523952 RASSF7Q02833 373 aa12.88□□□□□ -0.35
PTPN12-216ENST00000523952 FKBP8Q14318 412 aa12.88□□□□□ -0.35
PTPN12-216ENST00000523952 SRP68Q9UHB9 627 aaKnown RBP12.88□□□□□ -0.35
PTPN12-216ENST00000523952 NRXN2Q9P2S2 1712 aa12.88□□□□□ -0.35
PTPN12-216ENST00000523952 USP42Q9H9J4 1324 aaKnown RBP12.88□□□□□ -0.35
PTPN12-216ENST00000523952 GLTPD2A6NH11 291 aa12.87□□□□□ -0.35
PTPN12-216ENST00000523952 CRKLP46109 303 aaKnown RBP12.87□□□□□ -0.35
PTPN12-216ENST00000523952 PLEKHO1Q53GL0 409 aaPredicted RBP12.87□□□□□ -0.35
PTPN12-216ENST00000523952 DPY19L2Q6NUT2 758 aa12.87□□□□□ -0.35
PTPN12-216ENST00000523952 SP7Q8TDD2 431 aaPredicted RBP12.87□□□□□ -0.35
PTPN12-216ENST00000523952 SLC4A9Q96Q91 983 aa12.87□□□□□ -0.35
PTPN12-216ENST00000523952 ADAMTS7Q9UKP4 1686 aa12.86□□□□□ -0.35
PTPN12-216ENST00000523952 DDR1Q08345 913 aa12.86□□□□□ -0.35
PTPN12-216ENST00000523952 C1orf141Q5JVX7 400 aa12.86□□□□□ -0.35
PTPN12-216ENST00000523952 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
PTPN12-216ENST00000523952 SCN4AP35499 1836 aa12.85□□□□□ -0.35
PTPN12-216ENST00000523952 ANKRD31Q8N7Z5 1873 aa12.85□□□□□ -0.35
PTPN12-216ENST00000523952 MTHFSP49914 203 aa12.85□□□□□ -0.35
PTPN12-216ENST00000523952 TNNT2P45379 298 aaPredicted RBP12.84□□□□□ -0.35
PTPN12-216ENST00000523952 EIF4A2Q14240 407 aaKnown RBP12.84□□□□□ -0.35
PTPN12-216ENST00000523952 TTLL6Q8N841 843 aa12.84□□□□□ -0.35
PTPN12-216ENST00000523952 AIDAQ96BJ3 306 aa12.84□□□□□ -0.35
PTPN12-216ENST00000523952 KDM6AO15550 1401 aaPredicted RBP12.84□□□□□ -0.35
PTPN12-216ENST00000523952 ARFGEF2Q9Y6D5 1785 aa12.84□□□□□ -0.35
PTPN12-216ENST00000523952 POLRMTO00411 1230 aaKnown RBP12.83□□□□□ -0.36
PTPN12-216ENST00000523952 KCNA4P22459 653 aa12.83□□□□□ -0.36
PTPN12-216ENST00000523952 AMOTQ4VCS5 1084 aa12.83□□□□□ -0.36
PTPN12-216ENST00000523952 MKRN1Q9UHC7 482 aaKnown RBP12.83□□□□□ -0.36
PTPN12-216ENST00000523952 H0YIN7 160 aa12.82□□□□□ -0.36
PTPN12-216ENST00000523952 USPL1Q5W0Q7 1092 aa12.82□□□□□ -0.36
PTPN12-216ENST00000523952 NFATC2IPQ8NCF5 419 aa12.82□□□□□ -0.36
PTPN12-216ENST00000523952 CARD14Q9BXL6 1004 aa12.82□□□□□ -0.36
PTPN12-216ENST00000523952 POLKQ9UBT6 870 aa12.82□□□□□ -0.36
PTPN12-216ENST00000523952 COL11A2P13942 1736 aaPredicted RBP12.82□□□□□ -0.36
PTPN12-216ENST00000523952 TM4SF1P30408 202 aa12.81□□□□□ -0.36
PTPN12-216ENST00000523952 C2CD5Q86YS7 1000 aa12.81□□□□□ -0.36
PTPN12-216ENST00000523952 POLR3GLQ9BT43 218 aa12.81□□□□□ -0.36
PTPN12-216ENST00000523952 CREBZFQ9NS37 354 aa12.81□□□□□ -0.36
PTPN12-216ENST00000523952 SERPINB2P05120 415 aa12.79□□□□□ -0.36
PTPN12-216ENST00000523952 ERFEQ4G0M1 354 aa12.79□□□□□ -0.36
PTPN12-216ENST00000523952 CHADLQ6NUI6 762 aa12.79□□□□□ -0.36
PTPN12-216ENST00000523952 ZNF622Q969S3 477 aaKnown RBP eCLIP12.79□□□□□ -0.368e-12■■■□□ 14.8
PTPN12-216ENST00000523952 COL15A1P39059 1388 aa12.79□□□□□ -0.36
PTPN12-216ENST00000523952 SLX4Q8IY92 1834 aa12.78□□□□□ -0.36
PTPN12-216ENST00000523952 POLA2Q14181 598 aa12.78□□□□□ -0.36
PTPN12-216ENST00000523952 NFIXQ14938 502 aa12.78□□□□□ -0.36
PTPN12-216ENST00000523952 INTS5Q6P9B9 1019 aaKnown RBP12.78□□□□□ -0.36
PTPN12-216ENST00000523952 UBR2Q8IWV8 1755 aa12.78□□□□□ -0.36
PTPN12-216ENST00000523952 SCN7AQ01118 1682 aa12.77□□□□□ -0.36
PTPN12-216ENST00000523952 TRPM7Q96QT4 1865 aa12.77□□□□□ -0.37
PTPN12-216ENST00000523952 NPHP1O15259 732 aa12.77□□□□□ -0.37
PTPN12-216ENST00000523952 FOXN1O15353 648 aa12.77□□□□□ -0.37
PTPN12-216ENST00000523952 CTCFP49711 727 aaPredicted RBP12.77□□□□□ -0.37
PTPN12-216ENST00000523952 BICDL1Q6ZP65 573 aa12.77□□□□□ -0.37
PTPN12-216ENST00000523952 DNAJC10Q8IXB1 793 aa12.77□□□□□ -0.37
PTPN12-216ENST00000523952 PRDM10Q9NQV6 1147 aa12.77□□□□□ -0.37
PTPN12-216ENST00000523952 NARFQ9UHQ1 456 aa12.77□□□□□ -0.37
PTPN12-216ENST00000523952 SOS1Q07889 1333 aaPredicted RBP12.77□□□□□ -0.37
PTPN12-216ENST00000523952 NFKBIEO00221 500 aa12.76□□□□□ -0.37
PTPN12-216ENST00000523952 C21orf2O43822 256 aa12.75□□□□□ -0.37
PTPN12-216ENST00000523952 PDE6BP35913 854 aa12.75□□□□□ -0.37
PTPN12-216ENST00000523952 CNTNAP1P78357 1384 aa12.75□□□□□ -0.37
PTPN12-216ENST00000523952 PDZRN3Q9UPQ7 1066 aa12.75□□□□□ -0.37
PTPN12-216ENST00000523952 IQCA1LA6NCM1 817 aa12.74□□□□□ -0.37
PTPN12-216ENST00000523952 POTECB2RU33 542 aa12.74□□□□□ -0.37
PTPN12-216ENST00000523952 NPM2Q86SE8 214 aaKnown RBP12.74□□□□□ -0.37
PTPN12-216ENST00000523952 TAOK3Q9H2K8 898 aa12.74□□□□□ -0.37
PTPN12-216ENST00000523952 CARMIL3Q8ND23 1372 aa12.73□□□□□ -0.37
PTPN12-216ENST00000523952 SLC34A2O95436 690 aa12.73□□□□□ -0.37
PTPN12-216ENST00000523952 CYP19A1P11511 503 aaPredicted RBP12.73□□□□□ -0.37
PTPN12-216ENST00000523952 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
PTPN12-216ENST00000523952 SULT6B1Q6IMI4 303 aa12.73□□□□□ -0.37
PTPN12-216ENST00000523952 AEBP1Q8IUX7 1158 aa12.73□□□□□ -0.37
PTPN12-216ENST00000523952 CLEC11AQ9Y240 323 aa12.73□□□□□ -0.37
PTPN12-216ENST00000523952 BCORQ6W2J9 1755 aa12.73□□□□□ -0.37
PTPN12-216ENST00000523952 A0A087WZG4 1122 aa12.72□□□□□ -0.37
PTPN12-216ENST00000523952 TMEM88BA6NKF7 163 aa12.72□□□□□ -0.37
PTPN12-216ENST00000523952 DDNO94850 711 aaPredicted RBP12.72□□□□□ -0.37
PTPN12-216ENST00000523952 LBX1P52954 281 aa12.72□□□□□ -0.37
PTPN12-216ENST00000523952 EAPPQ56P03 285 aaPredicted RBP12.72□□□□□ -0.37
PTPN12-216ENST00000523952 AKAP4Q5JQC9 854 aa12.72□□□□□ -0.37
PTPN12-216ENST00000523952 LDHDQ86WU2 507 aa12.72□□□□□ -0.37
PTPN12-216ENST00000523952 SLC52A2Q9HAB3 445 aa12.72□□□□□ -0.37
PTPN12-216ENST00000523952 ZBTB1Q9Y2K1 713 aa12.72□□□□□ -0.37
PTPN12-216ENST00000523952 ZNF330Q9Y3S2 320 aaPredicted RBP12.72□□□□□ -0.37
PTPN12-216ENST00000523952 POTEIP0CG38 1075 aa12.71□□□□□ -0.37
PTPN12-216ENST00000523952 POTEJP0CG39 1038 aa12.71□□□□□ -0.37
PTPN12-216ENST00000523952 SLC39A6Q13433 755 aa12.71□□□□□ -0.37
PTPN12-216ENST00000523952 FAM161AQ3B820 660 aa12.71□□□□□ -0.37
PTPN12-216ENST00000523952 SOGA3Q5TF21 947 aa12.71□□□□□ -0.37
PTPN12-216ENST00000523952 TTC5Q8N0Z6 440 aa12.71□□□□□ -0.37
PTPN12-216ENST00000523952 STARD3NLO95772 234 aa12.7□□□□□ -0.38
PTPN12-216ENST00000523952 VEGFBP49765 207 aa12.7□□□□□ -0.38
PTPN12-216ENST00000523952 MORC1Q86VD1 984 aa12.7□□□□□ -0.38
PTPN12-216ENST00000523952 CNKSR1Q969H4 720 aa12.7□□□□□ -0.38
PTPN12-216ENST00000523952 BRIP1Q9BX63 1249 aa12.7□□□□□ -0.38
PTPN12-216ENST00000523952 SIPA1L3O60292 1781 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms