RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 GALNT6Q8NCL4 622 aa8.99□□□□□ -0.97
PCM1-219ENST00000523540 NLRP3Q96P20 1036 aa8.99□□□□□ -0.97
PCM1-219ENST00000523540 GAS2L1Q99501 681 aaPredicted RBP8.99□□□□□ -0.97
PCM1-219ENST00000523540 KRTAP4-8Q9BYQ9 185 aa8.99□□□□□ -0.97
PCM1-219ENST00000523540 ARHGEF10LQ9HCE6 1279 aa8.99□□□□□ -0.97
PCM1-219ENST00000523540 IL2RAP01589 272 aa8.98□□□□□ -0.97
PCM1-219ENST00000523540 GDF10P55107 478 aa8.98□□□□□ -0.97
PCM1-219ENST00000523540 SNRPNP63162 240 aaKnown RBP8.98□□□□□ -0.97
PCM1-219ENST00000523540 CRTC2Q53ET0 693 aaPredicted RBP8.98□□□□□ -0.97
PCM1-219ENST00000523540 CNKSR1Q969H4 720 aa8.98□□□□□ -0.97
PCM1-219ENST00000523540 ETNK1Q9HBU6 452 aa8.98□□□□□ -0.97
PCM1-219ENST00000523540 NSFL1CQ9UNZ2 370 aaKnown RBP8.98□□□□□ -0.97
PCM1-219ENST00000523540 BACH1O14867 736 aa8.97□□□□□ -0.97
PCM1-219ENST00000523540 DKK1O94907 266 aa8.97□□□□□ -0.97
PCM1-219ENST00000523540 RASA1P20936 1047 aa8.97□□□□□ -0.97
PCM1-219ENST00000523540 PTK7Q13308 1070 aa8.97□□□□□ -0.97
PCM1-219ENST00000523540 MTFR1Q15390 333 aa8.97□□□□□ -0.97
PCM1-219ENST00000523540 OGFOD1Q8N543 542 aa8.97□□□□□ -0.97
PCM1-219ENST00000523540 FHDC1Q9C0D6 1143 aaPredicted RBP8.97□□□□□ -0.97
PCM1-219ENST00000523540 NUCKS1Q9H1E3 243 aaKnown RBP8.97□□□□□ -0.97
PCM1-219ENST00000523540 DNAAF2Q9NVR5 837 aaKnown RBP8.97□□□□□ -0.97
PCM1-219ENST00000523540 KIAA1024Q9UPX6 916 aa8.97□□□□□ -0.97
PCM1-219ENST00000523540 TMEM229AB2RXF0 380 aa8.96□□□□□ -0.98
PCM1-219ENST00000523540 SHISA8B8ZZ34 492 aa8.96□□□□□ -0.98
PCM1-219ENST00000523540 ATG7O95352 703 aa8.96□□□□□ -0.98
PCM1-219ENST00000523540 BAG6P46379 1132 aa8.96□□□□□ -0.98
PCM1-219ENST00000523540 MAP2K3P46734 347 aa8.96□□□□□ -0.98
PCM1-219ENST00000523540 SLC27A3Q5K4L6 730 aa8.96□□□□□ -0.98
PCM1-219ENST00000523540 ALYREFQ86V81 257 aaKnown RBP8.96□□□□□ -0.98
PCM1-219ENST00000523540 CFHR5Q9BXR6 569 aa8.96□□□□□ -0.98
PCM1-219ENST00000523540 OXCT2Q9BYC2 517 aaPredicted RBP8.96□□□□□ -0.98
PCM1-219ENST00000523540 USP17L15C9J2P7 530 aa8.95□□□□□ -0.98
PCM1-219ENST00000523540 USP17L10C9JJH3 530 aa8.95□□□□□ -0.98
PCM1-219ENST00000523540 USP17L13C9JLJ4 530 aa8.95□□□□□ -0.98
PCM1-219ENST00000523540 USP17L12C9JPN9 530 aa8.95□□□□□ -0.98
PCM1-219ENST00000523540 USP17L11C9JVI0 530 aa8.95□□□□□ -0.98
PCM1-219ENST00000523540 USP17L21D6R901 530 aa8.95□□□□□ -0.98
PCM1-219ENST00000523540 USP17L18D6R9N7 530 aa8.95□□□□□ -0.98
PCM1-219ENST00000523540 USP17L22D6RA61 530 aa8.95□□□□□ -0.98
PCM1-219ENST00000523540 USP17L17D6RBQ6 530 aa8.95□□□□□ -0.98
PCM1-219ENST00000523540 USP17L19D6RCP7 530 aa8.95□□□□□ -0.98
PCM1-219ENST00000523540 USP17L20D6RJB6 530 aa8.95□□□□□ -0.98
PCM1-219ENST00000523540 F11P03951 625 aa8.95□□□□□ -0.98
PCM1-219ENST00000523540 COL8A1P27658 744 aa8.95□□□□□ -0.98
PCM1-219ENST00000523540 USP17L24Q0WX57 530 aa8.95□□□□□ -0.98
PCM1-219ENST00000523540 ELOAQ14241 798 aaKnown RBP8.95□□□□□ -0.98
PCM1-219ENST00000523540 LARP1Q6PKG0 1096 aaKnown RBP8.95□□□□□ -0.98
PCM1-219ENST00000523540 C1orf229Q6ZS94 237 aaPredicted RBP8.95□□□□□ -0.98
PCM1-219ENST00000523540 CENPCQ03188 943 aa8.94□□□□□ -0.98
PCM1-219ENST00000523540 STAU1O95793 577 aaKnown RBP8.93□□□□□ -0.98
PCM1-219ENST00000523540 SMTNP53814 917 aa8.93□□□□□ -0.98
PCM1-219ENST00000523540 UBAP2LQ14157 1087 aaKnown RBP8.93□□□□□ -0.98
PCM1-219ENST00000523540 CCDC102BQ68D86 513 aa8.93□□□□□ -0.98
PCM1-219ENST00000523540 TAS1R3Q7RTX0 852 aa8.93□□□□□ -0.98
PCM1-219ENST00000523540 PPARGC1BQ86YN6 1023 aaKnown RBP8.93□□□□□ -0.98
PCM1-219ENST00000523540 ZNF594Q96JF6 807 aaPredicted RBP8.93□□□□□ -0.98
PCM1-219ENST00000523540 ARXQ96QS3 562 aa8.93□□□□□ -0.98
PCM1-219ENST00000523540 TIMMDC1Q9NPL8 285 aa8.93□□□□□ -0.98
PCM1-219ENST00000523540 MKL2Q9ULH7 1088 aa8.93□□□□□ -0.98
PCM1-219ENST00000523540 ACIN1Q9UKV3 1341 aaKnown RBP8.92□□□□□ -0.98
PCM1-219ENST00000523540 HOXB4P17483 251 aaPredicted RBP8.92□□□□□ -0.98
PCM1-219ENST00000523540 GTF2E1P29083 439 aaPredicted RBP8.92□□□□□ -0.98
PCM1-219ENST00000523540 ANKMY2Q8IV38 441 aa8.92□□□□□ -0.98
PCM1-219ENST00000523540 Q8N3U1 123 aa8.92□□□□□ -0.98
PCM1-219ENST00000523540 TPCN2Q8NHX9 752 aa8.92□□□□□ -0.98
PCM1-219ENST00000523540 KLRG1Q96E93 195 aa8.92□□□□□ -0.98
PCM1-219ENST00000523540 ZSCAN10Q96SZ4 725 aaPredicted RBP8.92□□□□□ -0.98
PCM1-219ENST00000523540 ZMIZ1Q9ULJ6 1067 aa8.92□□□□□ -0.98
PCM1-219ENST00000523540 CDK2AP1O14519 115 aa8.91□□□□□ -0.98
PCM1-219ENST00000523540 EPHA4P54764 986 aa8.91□□□□□ -0.98
PCM1-219ENST00000523540 PSME1Q06323 249 aa8.91□□□□□ -0.98
PCM1-219ENST00000523540 TLR1Q15399 786 aa8.91□□□□□ -0.98
PCM1-219ENST00000523540 RHBDD1Q8TEB9 315 aa8.91□□□□□ -0.98
PCM1-219ENST00000523540 RAB6BQ9NRW1 208 aa8.91□□□□□ -0.98
PCM1-219ENST00000523540 ZNF358Q9NW07 568 aa8.91□□□□□ -0.98
PCM1-219ENST00000523540 NOVA2Q9UNW9 492 aaKnown RBP8.91□□□□□ -0.98
PCM1-219ENST00000523540 DPYDQ12882 1025 aa8.9□□□□□ -0.98
PCM1-219ENST00000523540 POTEAQ6S8J7 498 aa8.9□□□□□ -0.98
PCM1-219ENST00000523540 ZNF295-AS1Q8N0V1 137 aa8.9□□□□□ -0.98
PCM1-219ENST00000523540 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.9□□□□□ -0.98
PCM1-219ENST00000523540 GDF2Q9UK05 429 aaPredicted RBP8.9□□□□□ -0.98
PCM1-219ENST00000523540 A6NJY4 79 aa8.89□□□□□ -0.99
PCM1-219ENST00000523540 SEC13P55735 322 aa8.89□□□□□ -0.99
PCM1-219ENST00000523540 GNASQ5JWF2 1037 aa8.89□□□□□ -0.99
PCM1-219ENST00000523540 STK32AQ8WU08 396 aa8.89□□□□□ -0.99
PCM1-219ENST00000523540 IQSEC3Q9UPP2 1182 aaPredicted RBP8.89□□□□□ -0.99
PCM1-219ENST00000523540 RBM19Q9Y4C8 960 aaKnown RBP8.89□□□□□ -0.99
PCM1-219ENST00000523540 SFI1A8K8P3 1242 aa8.88□□□□□ -0.99
PCM1-219ENST00000523540 LBRQ14739 615 aaKnown RBP8.88□□□□□ -0.99
PCM1-219ENST00000523540 LINC00114Q6XXX2 140 aa8.88□□□□□ -0.99
PCM1-219ENST00000523540 STAG2Q8N3U4 1231 aa8.88□□□□□ -0.99
PCM1-219ENST00000523540 GAS2L2Q8NHY3 880 aa8.88□□□□□ -0.99
PCM1-219ENST00000523540 C1orf216Q8TAB5 229 aa8.88□□□□□ -0.99
PCM1-219ENST00000523540 FAM200AQ8TCP9 573 aa8.88□□□□□ -0.99
PCM1-219ENST00000523540 EDARADDQ8WWZ3 215 aa8.88□□□□□ -0.99
PCM1-219ENST00000523540 SCHIP1Q9P0W5 487 aaPredicted RBP8.88□□□□□ -0.99
PCM1-219ENST00000523540 A0A1B0GTH6 734 aa8.87□□□□□ -0.99
PCM1-219ENST00000523540 FURINP09958 794 aa8.87□□□□□ -0.99
PCM1-219ENST00000523540 HIRAP54198 1017 aaPredicted RBP8.87□□□□□ -0.99
PCM1-219ENST00000523540 PHF24Q9UPV7 400 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms