RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 DNAAF4Q8WXU2 420 aa26.07■■□□□ 1.76
SQLE-206ENST00000523430 DDX21Q9NR30 783 aaKnown RBP eCLIP26.07■■□□□ 1.76
SQLE-206ENST00000523430 RPAP2Q8IXW5 612 aaPredicted RBP26.06■■□□□ 1.76
SQLE-206ENST00000523430 HYPKQ9NX55 129 aa26.06■■□□□ 1.76
SQLE-206ENST00000523430 TNS2Q63HR2 1409 aa26.06■■□□□ 1.76
SQLE-206ENST00000523430 SLIT2O94813 1529 aa26.06■■□□□ 1.76
SQLE-206ENST00000523430 LNPKQ9C0E8 428 aa26.05■■□□□ 1.76
SQLE-206ENST00000523430 USP16Q9Y5T5 823 aa26.05■■□□□ 1.76
SQLE-206ENST00000523430 BEND3Q5T5X7 828 aa26.04■■□□□ 1.76
SQLE-206ENST00000523430 CHD1LQ86WJ1 897 aa26.04■■□□□ 1.76
SQLE-206ENST00000523430 SRCIN1Q9C0H9 1055 aa26.04■■□□□ 1.76
SQLE-206ENST00000523430 SPATA31A1Q5TZJ5 1347 aa26.04■■□□□ 1.76
SQLE-206ENST00000523430 GNAI2P04899 355 aa26.04■■□□□ 1.76
SQLE-206ENST00000523430 GNAI3P08754 354 aa26.03■■□□□ 1.76
SQLE-206ENST00000523430 USP44Q9H0E7 712 aa26.03■■□□□ 1.76
SQLE-206ENST00000523430 MAP3K2Q9Y2U5 619 aa26.03■■□□□ 1.76
SQLE-206ENST00000523430 LRP6O75581 1613 aa26.03■■□□□ 1.76
SQLE-206ENST00000523430 MYL6BP14649 208 aa26.02■■□□□ 1.76
SQLE-206ENST00000523430 ANKRD45Q5TZF3 282 aa26.02■■□□□ 1.76
SQLE-206ENST00000523430 DCTPP1Q9H773 170 aa26.02■■□□□ 1.76
SQLE-206ENST00000523430 PIP4K2AP48426 406 aaPredicted RBP26.01■■□□□ 1.75
SQLE-206ENST00000523430 AIMP1Q12904 312 aaKnown RBP26.01■■□□□ 1.75
SQLE-206ENST00000523430 KSR2Q6VAB6 950 aa26.01■■□□□ 1.75
SQLE-206ENST00000523430 AEBP2Q6ZN18 517 aaPredicted RBP26.01■■□□□ 1.75
SQLE-206ENST00000523430 JCADQ9P266 1359 aa26.01■■□□□ 1.75
SQLE-206ENST00000523430 ITGB4P16144 1822 aa26.01■■□□□ 1.75
SQLE-206ENST00000523430 TMOD3Q9NYL9 352 aa26■■□□□ 1.75
SQLE-206ENST00000523430 LRP10Q7Z4F1 713 aa26■■□□□ 1.75
SQLE-206ENST00000523430 LRRFIP2Q9Y608 721 aaKnown RBP26■■□□□ 1.75
SQLE-206ENST00000523430 UBTFL1P0CB47 393 aaPredicted RBP25.98■■□□□ 1.75
SQLE-206ENST00000523430 SPATA31A5Q5VU36 1347 aa25.98■■□□□ 1.75
SQLE-206ENST00000523430 SPATA31A7Q8IWB4 1347 aa25.98■■□□□ 1.75
SQLE-206ENST00000523430 EXOC5O00471 708 aa25.98■■□□□ 1.75
SQLE-206ENST00000523430 XAGE3Q8WTP9 111 aa25.98■■□□□ 1.75
SQLE-206ENST00000523430 DOT1LQ8TEK3 1739 aa25.97■■□□□ 1.75
SQLE-206ENST00000523430 PTCD1O75127 700 aaKnown RBP25.97■■□□□ 1.75
SQLE-206ENST00000523430 DDX58O95786 925 aaKnown RBP25.97■■□□□ 1.75
SQLE-206ENST00000523430 CERKQ8TCT0 537 aa25.96■■□□□ 1.75
SQLE-206ENST00000523430 PIGBQ92521 554 aa25.96■■□□□ 1.75
SQLE-206ENST00000523430 THRAP3Q9Y2W1 955 aaKnown RBP25.96■■□□□ 1.75
SQLE-206ENST00000523430 HMMRO75330 724 aa25.96■■□□□ 1.75
SQLE-206ENST00000523430 NBPF7P0C2Y1 421 aaPredicted RBP25.95■■□□□ 1.74
SQLE-206ENST00000523430 COPS6Q7L5N1 327 aa25.95■■□□□ 1.74
SQLE-206ENST00000523430 PNMA6EA0A0J9YXQ4 647 aa25.94■■□□□ 1.74
SQLE-206ENST00000523430 CWF19L2Q2TBE0 894 aaKnown RBP25.94■■□□□ 1.74
SQLE-206ENST00000523430 NPM2Q86SE8 214 aaKnown RBP25.94■■□□□ 1.74
SQLE-206ENST00000523430 CDCA7Q9BWT1 371 aaPredicted RBP25.94■■□□□ 1.74
SQLE-206ENST00000523430 C8orf37Q96NL8 207 aa25.94■■□□□ 1.74
SQLE-206ENST00000523430 CCDC9Q9Y3X0 531 aaKnown RBP25.94■■□□□ 1.74
SQLE-206ENST00000523430 BCL9O00512 1426 aa25.93■■□□□ 1.74
SQLE-206ENST00000523430 ASAP1Q9ULH1 1129 aa25.93■■□□□ 1.74
SQLE-206ENST00000523430 ARFGEF2Q9Y6D5 1785 aa25.93■■□□□ 1.74
SQLE-206ENST00000523430 ALDH1L1O75891 902 aa25.92■■□□□ 1.74
SQLE-206ENST00000523430 RIC3Q7Z5B4 369 aa25.92■■□□□ 1.74
SQLE-206ENST00000523430 NBPF26B4DH59 902 aa25.91■■□□□ 1.74
SQLE-206ENST00000523430 NBPF14Q5TI25 921 aa25.91■■□□□ 1.74
SQLE-206ENST00000523430 NBPF10Q6P3W6 841 aaKnown RBP25.91■■□□□ 1.74
SQLE-206ENST00000523430 NBPF15Q8N660 670 aa25.91■■□□□ 1.74
SQLE-206ENST00000523430 BCL9LQ86UU0 1499 aa25.91■■□□□ 1.74
SQLE-206ENST00000523430 APBB1O00213 710 aa25.91■■□□□ 1.74
SQLE-206ENST00000523430 ATP8B2P98198 1209 aa25.91■■□□□ 1.74
SQLE-206ENST00000523430 DDB1Q16531 1140 aa25.91■■□□□ 1.74
SQLE-206ENST00000523430 ATG3Q9NT62 314 aa25.91■■□□□ 1.74
SQLE-206ENST00000523430 ERBB4Q15303 1308 aa25.91■■□□□ 1.74
SQLE-206ENST00000523430 ANP32AP39687 249 aaKnown RBP25.9■■□□□ 1.74
SQLE-206ENST00000523430 UNC5CLQ8IV45 518 aa25.9■■□□□ 1.74
SQLE-206ENST00000523430 LINS1Q8NG48 757 aa25.9■■□□□ 1.74
SQLE-206ENST00000523430 IGKV5-2P06315 115 aa25.89■■□□□ 1.73
SQLE-206ENST00000523430 SMARCA5O60264 1052 aaPredicted RBP25.88■■□□□ 1.73
SQLE-206ENST00000523430 BARGINQ6ZT62 677 aa25.88■■□□□ 1.73
SQLE-206ENST00000523430 NGLY1Q96IV0 654 aa25.88■■□□□ 1.73
SQLE-206ENST00000523430 BCL11AQ9H165 835 aa25.88■■□□□ 1.73
SQLE-206ENST00000523430 EXOC6BQ9Y2D4 811 aa25.88■■□□□ 1.73
SQLE-206ENST00000523430 A1BGP04217 495 aa25.87■■□□□ 1.73
SQLE-206ENST00000523430 SYTL4Q96C24 671 aaPredicted RBP25.87■■□□□ 1.73
SQLE-206ENST00000523430 NUP188Q5SRE5 1749 aa25.87■■□□□ 1.73
SQLE-206ENST00000523430 ANKRD13DQ6ZTN6 518 aa25.87■■□□□ 1.73
SQLE-206ENST00000523430 METTL22Q9BUU2 404 aaPredicted RBP25.87■■□□□ 1.73
SQLE-206ENST00000523430 C9orf78Q9NZ63 289 aaPredicted RBP25.87■■□□□ 1.73
SQLE-206ENST00000523430 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.86■■□□□ 1.73
SQLE-206ENST00000523430 SEC24BO95487 1268 aa25.86■■□□□ 1.73
SQLE-206ENST00000523430 MYD88Q99836 296 aa25.86■■□□□ 1.73
SQLE-206ENST00000523430 SPATA31A6Q5VVP1 1343 aa25.86■■□□□ 1.73
SQLE-206ENST00000523430 PPP1R42Q7Z4L9 355 aa25.85■■□□□ 1.73
SQLE-206ENST00000523430 C16orf71Q8IYS4 520 aaPredicted RBP25.85■■□□□ 1.73
SQLE-206ENST00000523430 MARCH10Q8NA82 808 aaPredicted RBP25.85■■□□□ 1.73
SQLE-206ENST00000523430 OTUD7AQ8TE49 926 aaPredicted RBP25.85■■□□□ 1.73
SQLE-206ENST00000523430 AFDNP55196 1824 aaKnown RBP25.84■■□□□ 1.73
SQLE-206ENST00000523430 NEURL1BA8MQ27 555 aa25.84■■□□□ 1.73
SQLE-206ENST00000523430 GRM8O00222 908 aa25.84■■□□□ 1.73
SQLE-206ENST00000523430 NEXNQ0ZGT2 675 aa25.84■■□□□ 1.73
SQLE-206ENST00000523430 SSH3Q8TE77 659 aa25.84■■□□□ 1.73
SQLE-206ENST00000523430 ZBTB47Q9UFB7 747 aaPredicted RBP25.84■■□□□ 1.73
SQLE-206ENST00000523430 IBTKQ9P2D0 1353 aaPredicted RBP25.84■■□□□ 1.73
SQLE-206ENST00000523430 UTYO14607 1347 aa25.83■■□□□ 1.73
SQLE-206ENST00000523430 PRIM1P49642 420 aaKnown RBP25.83■■□□□ 1.73
SQLE-206ENST00000523430 POLA2Q14181 598 aa25.83■■□□□ 1.73
SQLE-206ENST00000523430 DNAJC10Q8IXB1 793 aa25.83■■□□□ 1.73
SQLE-206ENST00000523430 VPS72Q15906 364 aa25.83■■□□□ 1.72
SQLE-206ENST00000523430 PLEKHM2Q8IWE5 1019 aa25.83■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms