RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 RGPD1P0DJD0 1748 aa9.82□□□□□ -0.84
VPS13B-211ENST00000522802 NWD2Q9ULI1 1742 aa9.82□□□□□ -0.84
VPS13B-211ENST00000522802 KIF1BO60333 1816 aa9.8□□□□□ -0.84
VPS13B-211ENST00000522802 NRAPQ86VF7 1730 aa9.8□□□□□ -0.84
VPS13B-211ENST00000522802 TLL1O43897 1013 aa9.8□□□□□ -0.84
VPS13B-211ENST00000522802 ADH1BP00325 375 aa9.8□□□□□ -0.84
VPS13B-211ENST00000522802 RFC5P40937 340 aa9.8□□□□□ -0.84
VPS13B-211ENST00000522802 FAM50AQ14320 339 aaKnown RBP9.8□□□□□ -0.84
VPS13B-211ENST00000522802 NKX2-3Q8TAU0 364 aa9.8□□□□□ -0.84
VPS13B-211ENST00000522802 CFAP99D6REC4 459 aa9.79□□□□□ -0.84
VPS13B-211ENST00000522802 SF3B2Q13435 895 aaKnown RBP9.79□□□□□ -0.84
VPS13B-211ENST00000522802 LAPTM4AQ15012 233 aa9.79□□□□□ -0.84
VPS13B-211ENST00000522802 ZNF326Q5BKZ1 582 aaKnown RBP9.79□□□□□ -0.84
VPS13B-211ENST00000522802 UNC5CLQ8IV45 518 aa9.79□□□□□ -0.84
VPS13B-211ENST00000522802 PRR7Q8TB68 274 aa9.79□□□□□ -0.84
VPS13B-211ENST00000522802 NPHP3Q7Z494 1330 aa9.79□□□□□ -0.84
VPS13B-211ENST00000522802 FMN2Q9NZ56 1722 aa9.79□□□□□ -0.84
VPS13B-211ENST00000522802 PPLO60437 1756 aa9.78□□□□□ -0.84
VPS13B-211ENST00000522802 NUP155O75694 1391 aa9.78□□□□□ -0.84
VPS13B-211ENST00000522802 KIF1AQ12756 1690 aa9.78□□□□□ -0.84
VPS13B-211ENST00000522802 GFRA3O60609 400 aa9.78□□□□□ -0.84
VPS13B-211ENST00000522802 MSS51Q4VC12 460 aa9.78□□□□□ -0.84
VPS13B-211ENST00000522802 DESI1Q6ICB0 168 aa9.78□□□□□ -0.84
VPS13B-211ENST00000522802 SEPT12Q8IYM1 358 aa9.78□□□□□ -0.84
VPS13B-211ENST00000522802 HFM1A2PYH4 1435 aa9.78□□□□□ -0.84
VPS13B-211ENST00000522802 NAIPQ13075 1403 aa9.76□□□□□ -0.85
VPS13B-211ENST00000522802 LOC105371045A0A1W2PR82 267 aa9.76□□□□□ -0.85
VPS13B-211ENST00000522802 FOXO3O43524 673 aa9.76□□□□□ -0.85
VPS13B-211ENST00000522802 TMEM259Q4ZIN3 620 aa9.76□□□□□ -0.85
VPS13B-211ENST00000522802 ESCO1Q5FWF5 840 aa9.76□□□□□ -0.85
VPS13B-211ENST00000522802 TRAF7Q6Q0C0 670 aa9.76□□□□□ -0.85
VPS13B-211ENST00000522802 IFT172Q9UG01 1749 aa9.76□□□□□ -0.85
VPS13B-211ENST00000522802 ROCK1Q13464 1354 aa9.75□□□□□ -0.85
VPS13B-211ENST00000522802 RGPD8O14715 1765 aaPredicted RBP9.75□□□□□ -0.85
VPS13B-211ENST00000522802 THSD7AQ9UPZ6 1657 aa9.75□□□□□ -0.85
VPS13B-211ENST00000522802 MMP16P51512 607 aa9.75□□□□□ -0.85
VPS13B-211ENST00000522802 R3HDM1Q15032 1099 aaKnown RBP9.75□□□□□ -0.85
VPS13B-211ENST00000522802 KRT27Q7Z3Y8 459 aa9.75□□□□□ -0.85
VPS13B-211ENST00000522802 SLC6A16Q9GZN6 736 aa9.75□□□□□ -0.85
VPS13B-211ENST00000522802 RREB1Q92766 1687 aa9.74□□□□□ -0.85
VPS13B-211ENST00000522802 CAMTA1Q9Y6Y1 1673 aa9.74□□□□□ -0.85
VPS13B-211ENST00000522802 NUP188Q5SRE5 1749 aa9.74□□□□□ -0.85
VPS13B-211ENST00000522802 KNDC1Q76NI1 1749 aa9.74□□□□□ -0.85
VPS13B-211ENST00000522802 YY1P25490 414 aa9.74□□□□□ -0.85
VPS13B-211ENST00000522802 BAG6P46379 1132 aa9.74□□□□□ -0.85
VPS13B-211ENST00000522802 VPS72Q15906 364 aa9.74□□□□□ -0.85
VPS13B-211ENST00000522802 GTF3C3Q9Y5Q9 886 aa9.74□□□□□ -0.85
VPS13B-211ENST00000522802 ADGRB2O60241 1585 aa9.74□□□□□ -0.85
VPS13B-211ENST00000522802 CCDC144AA2RUR9 1427 aa9.73□□□□□ -0.85
VPS13B-211ENST00000522802 DISP2A7MBM2 1401 aa9.73□□□□□ -0.85
VPS13B-211ENST00000522802 DXOO77932 396 aaKnown RBP9.73□□□□□ -0.85
VPS13B-211ENST00000522802 JUNDP17535 347 aa9.73□□□□□ -0.85
VPS13B-211ENST00000522802 BANK1Q8NDB2 785 aa9.73□□□□□ -0.85
VPS13B-211ENST00000522802 PRKD2Q9BZL6 878 aa9.73□□□□□ -0.85
VPS13B-211ENST00000522802 PRDM9Q9NQV7 894 aa9.73□□□□□ -0.85
VPS13B-211ENST00000522802 SPATA31A3Q5VYP0 1347 aa9.73□□□□□ -0.85
VPS13B-211ENST00000522802 TNS3Q68CZ2 1445 aa9.73□□□□□ -0.85
VPS13B-211ENST00000522802 AP1G2O75843 785 aa9.72□□□□□ -0.85
VPS13B-211ENST00000522802 CTDSPL2Q05D32 466 aa9.72□□□□□ -0.85
VPS13B-211ENST00000522802 FAM182BQ5T319 152 aa9.72□□□□□ -0.85
VPS13B-211ENST00000522802 LRPPRCP42704 1394 aaKnown RBP9.72□□□□□ -0.85
VPS13B-211ENST00000522802 CRYBG1Q9Y4K1 1723 aa9.71□□□□□ -0.85
VPS13B-211ENST00000522802 S1PR4O95977 384 aa9.71□□□□□ -0.86
VPS13B-211ENST00000522802 MYT1Q01538 1121 aa9.71□□□□□ -0.86
VPS13B-211ENST00000522802 LYPD8Q6UX82 237 aa9.71□□□□□ -0.86
VPS13B-211ENST00000522802 HELBQ8NG08 1087 aaPredicted RBP9.71□□□□□ -0.86
VPS13B-211ENST00000522802 CCDC9Q9Y3X0 531 aaKnown RBP9.71□□□□□ -0.86
VPS13B-211ENST00000522802 UTRNP46939 3433 aa9.7□□□□□ -0.86
VPS13B-211ENST00000522802 PER1O15534 1290 aaPredicted RBP9.7□□□□□ -0.86
VPS13B-211ENST00000522802 PLEKHH1Q9ULM0 1364 aa9.7□□□□□ -0.86
VPS13B-211ENST00000522802 TECPR2O15040 1411 aa9.7□□□□□ -0.86
VPS13B-211ENST00000522802 TRPM3Q9HCF6 1732 aaPredicted RBP9.7□□□□□ -0.86
VPS13B-211ENST00000522802 COL14A1Q05707 1796 aaKnown RBP9.7□□□□□ -0.86
VPS13B-211ENST00000522802 PPP1R18Q6NYC8 613 aa9.69□□□□□ -0.86
VPS13B-211ENST00000522802 TSC1Q92574 1164 aa9.69□□□□□ -0.86
VPS13B-211ENST00000522802 ALS2Q96Q42 1657 aa9.68□□□□□ -0.86
VPS13B-211ENST00000522802 NRG2O14511 850 aaPredicted RBP9.68□□□□□ -0.86
VPS13B-211ENST00000522802 EZH2Q15910 746 aaKnown RBP9.68□□□□□ -0.86
VPS13B-211ENST00000522802 PTPRNQ16849 979 aa9.68□□□□□ -0.86
VPS13B-211ENST00000522802 RNF223E7ERA6 249 aa9.67□□□□□ -0.86
VPS13B-211ENST00000522802 USP17L8P0C7I0 530 aa9.67□□□□□ -0.86
VPS13B-211ENST00000522802 WAPLQ7Z5K2 1190 aa9.67□□□□□ -0.86
VPS13B-211ENST00000522802 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.67□□□□□ -0.86
VPS13B-211ENST00000522802 NRXN1Q9ULB1 1477 aa9.66□□□□□ -0.86
VPS13B-211ENST00000522802 FAM83GA6ND36 823 aa9.66□□□□□ -0.86
VPS13B-211ENST00000522802 GGCXP38435 758 aa9.66□□□□□ -0.86
VPS13B-211ENST00000522802 KRT28Q7Z3Y7 464 aa9.66□□□□□ -0.86
VPS13B-211ENST00000522802 LRRN4Q8WUT4 740 aa9.66□□□□□ -0.86
VPS13B-211ENST00000522802 SNRKQ9NRH2 765 aa9.66□□□□□ -0.86
VPS13B-211ENST00000522802 EVA1BQ9NVM1 165 aa9.66□□□□□ -0.86
VPS13B-211ENST00000522802 PPEF1O14829 653 aaPredicted RBP9.65□□□□□ -0.86
VPS13B-211ENST00000522802 ITGAEP38570 1179 aa9.65□□□□□ -0.86
VPS13B-211ENST00000522802 ANKLE1Q8NAG6 615 aa9.65□□□□□ -0.86
VPS13B-211ENST00000522802 V9GY48 417 aaPredicted RBP9.65□□□□□ -0.86
VPS13B-211ENST00000522802 CEP350Q5VT06 3117 aa9.65□□□□□ -0.86
VPS13B-211ENST00000522802 RRBP1Q9P2E9 1410 aaKnown RBP9.65□□□□□ -0.87
VPS13B-211ENST00000522802 SBNO1A3KN83 1393 aa9.64□□□□□ -0.87
VPS13B-211ENST00000522802 ARHGEF10O15013 1369 aa9.64□□□□□ -0.87
VPS13B-211ENST00000522802 NRKQ7Z2Y5 1582 aa9.64□□□□□ -0.87
VPS13B-211ENST00000522802 F12P00748 615 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 1018.3 ms