RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 SKAP1Q86WV1 359 aa19.54■□□□□ 0.72
CTNNA1-236ENST00000522792 C1orf115Q9H7X2 142 aa19.54■□□□□ 0.72
CTNNA1-236ENST00000522792 GLI3P10071 1580 aa19.54■□□□□ 0.72
CTNNA1-236ENST00000522792 USP16Q9Y5T5 823 aa19.52■□□□□ 0.72
CTNNA1-236ENST00000522792 KCPQ6ZWJ8 1503 aa19.52■□□□□ 0.72
CTNNA1-236ENST00000522792 UBR2Q8IWV8 1755 aa19.52■□□□□ 0.72
CTNNA1-236ENST00000522792 PTCD1O75127 700 aaKnown RBP19.52■□□□□ 0.72
CTNNA1-236ENST00000522792 PIGBQ92521 554 aa19.52■□□□□ 0.72
CTNNA1-236ENST00000522792 CHMP4BQ9H444 224 aaKnown RBP19.52■□□□□ 0.72
CTNNA1-236ENST00000522792 ITGB4P16144 1822 aa19.52■□□□□ 0.71
CTNNA1-236ENST00000522792 SYTL4Q96C24 671 aaPredicted RBP19.51■□□□□ 0.71
CTNNA1-236ENST00000522792 DOT1LQ8TEK3 1739 aa19.5■□□□□ 0.71
CTNNA1-236ENST00000522792 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.5■□□□□ 0.71
CTNNA1-236ENST00000522792 CCT4P50991 539 aaKnown RBP19.5■□□□□ 0.71
CTNNA1-236ENST00000522792 MARCH10Q8NA82 808 aaPredicted RBP19.5■□□□□ 0.71
CTNNA1-236ENST00000522792 MYL6BP14649 208 aa19.49■□□□□ 0.71
CTNNA1-236ENST00000522792 PDIA6Q15084 440 aa19.49■□□□□ 0.71
CTNNA1-236ENST00000522792 RWDD1Q9H446 243 aaPredicted RBP19.49■□□□□ 0.71
CTNNA1-236ENST00000522792 DDX21Q9NR30 783 aaKnown RBP eCLIP19.49■□□□□ 0.71
CTNNA1-236ENST00000522792 ASAP1Q9ULH1 1129 aa19.49■□□□□ 0.71
CTNNA1-236ENST00000522792 AFF2P51816 1311 aa19.49■□□□□ 0.71
CTNNA1-236ENST00000522792 LAMB4A4D0S4 1761 aa19.49■□□□□ 0.71
CTNNA1-236ENST00000522792 A0A0G2JS52 829 aa19.49■□□□□ 0.71
CTNNA1-236ENST00000522792 PIP4K2AP48426 406 aaPredicted RBP19.49■□□□□ 0.71
CTNNA1-236ENST00000522792 MEIS3Q99687 375 aa19.48■□□□□ 0.71
CTNNA1-236ENST00000522792 HYPKQ9NX55 129 aa19.48■□□□□ 0.71
CTNNA1-236ENST00000522792 BCL9O00512 1426 aa19.48■□□□□ 0.71
CTNNA1-236ENST00000522792 PRIM1P49642 420 aaKnown RBP19.47■□□□□ 0.71
CTNNA1-236ENST00000522792 ATG3Q9NT62 314 aa19.47■□□□□ 0.71
CTNNA1-236ENST00000522792 PI4KAP2A4QPH2 592 aa19.47■□□□□ 0.71
CTNNA1-236ENST00000522792 AIMP1Q12904 312 aaKnown RBP19.47■□□□□ 0.71
CTNNA1-236ENST00000522792 PI4KAP1Q8N8J0 262 aa19.47■□□□□ 0.71
CTNNA1-236ENST00000522792 ACSBG1Q96GR2 724 aa19.47■□□□□ 0.71
CTNNA1-236ENST00000522792 PXDNLA1KZ92 1463 aa19.47■□□□□ 0.71
CTNNA1-236ENST00000522792 ADCY9O60503 1353 aa19.47■□□□□ 0.71
CTNNA1-236ENST00000522792 HDAC1Q13547 482 aaPredicted RBP19.45■□□□□ 0.7
CTNNA1-236ENST00000522792 DNAAF4Q8WXU2 420 aa19.45■□□□□ 0.7
CTNNA1-236ENST00000522792 N4BP2Q86UW6 1770 aaPredicted RBP19.45■□□□□ 0.7
CTNNA1-236ENST00000522792 RBM42Q9BTD8 480 aaKnown RBP19.44■□□□□ 0.7
CTNNA1-236ENST00000522792 KAT6BQ8WYB5 2073 aa19.44■□□□□ 0.7
CTNNA1-236ENST00000522792 MAP3K2Q9Y2U5 619 aa19.44■□□□□ 0.7
CTNNA1-236ENST00000522792 MAPK8IP2Q13387 824 aaPredicted RBP19.43■□□□□ 0.7
CTNNA1-236ENST00000522792 XAGE3Q8WTP9 111 aa19.43■□□□□ 0.7
CTNNA1-236ENST00000522792 KSR2Q6VAB6 950 aa19.42■□□□□ 0.7
CTNNA1-236ENST00000522792 GJD4Q96KN9 370 aaPredicted RBP19.42■□□□□ 0.7
CTNNA1-236ENST00000522792 COPS6Q7L5N1 327 aa19.42■□□□□ 0.7
CTNNA1-236ENST00000522792 LRP10Q7Z4F1 713 aa19.42■□□□□ 0.7
CTNNA1-236ENST00000522792 SIRT2Q8IXJ6 389 aa19.42■□□□□ 0.7
CTNNA1-236ENST00000522792 SRCIN1Q9C0H9 1055 aa19.42■□□□□ 0.7
CTNNA1-236ENST00000522792 DDX58O95786 925 aaKnown RBP19.41■□□□□ 0.7
CTNNA1-236ENST00000522792 A1BGP04217 495 aa19.41■□□□□ 0.7
CTNNA1-236ENST00000522792 BEND3Q5T5X7 828 aa19.41■□□□□ 0.7
CTNNA1-236ENST00000522792 TSHZ2Q9NRE2 1034 aa19.41■□□□□ 0.7
CTNNA1-236ENST00000522792 THSD7AQ9UPZ6 1657 aa19.41■□□□□ 0.7
CTNNA1-236ENST00000522792 NBPF26B4DH59 902 aa19.41■□□□□ 0.7
CTNNA1-236ENST00000522792 RGS3P49796 1198 aa19.41■□□□□ 0.7
CTNNA1-236ENST00000522792 NBPF14Q5TI25 921 aa19.41■□□□□ 0.7
CTNNA1-236ENST00000522792 NBPF10Q6P3W6 841 aaKnown RBP19.41■□□□□ 0.7
CTNNA1-236ENST00000522792 DNAJC10Q8IXB1 793 aa19.41■□□□□ 0.7
CTNNA1-236ENST00000522792 NBPF15Q8N660 670 aa19.41■□□□□ 0.7
CTNNA1-236ENST00000522792 ATRNO75882 1429 aa19.4■□□□□ 0.7
CTNNA1-236ENST00000522792 ATP10DQ9P241 1426 aa19.4■□□□□ 0.7
CTNNA1-236ENST00000522792 RIC3Q7Z5B4 369 aa19.39■□□□□ 0.69
CTNNA1-236ENST00000522792 TRPC5Q9UL62 973 aaPredicted RBP19.39■□□□□ 0.69
CTNNA1-236ENST00000522792 PDZRN3Q9UPQ7 1066 aa19.39■□□□□ 0.69
CTNNA1-236ENST00000522792 ERBB4Q15303 1308 aa19.38■□□□□ 0.69
CTNNA1-236ENST00000522792 KCNQ2O43526 872 aa19.38■□□□□ 0.69
CTNNA1-236ENST00000522792 CEP85Q6P2H3 762 aa19.38■□□□□ 0.69
CTNNA1-236ENST00000522792 VSIG10Q8N0Z9 540 aa19.38■□□□□ 0.69
CTNNA1-236ENST00000522792 SLC4A9Q96Q91 983 aa19.38■□□□□ 0.69
CTNNA1-236ENST00000522792 USP44Q9H0E7 712 aa19.38■□□□□ 0.69
CTNNA1-236ENST00000522792 GNAI2P04899 355 aa19.37■□□□□ 0.69
CTNNA1-236ENST00000522792 GNAI3P08754 354 aa19.37■□□□□ 0.69
CTNNA1-236ENST00000522792 ANKRD44Q8N8A2 993 aa19.37■□□□□ 0.69
CTNNA1-236ENST00000522792 SMC5Q8IY18 1101 aa19.37■□□□□ 0.69
CTNNA1-236ENST00000522792 CWF19L2Q2TBE0 894 aaKnown RBP19.36■□□□□ 0.69
CTNNA1-236ENST00000522792 FAM182BQ5T319 152 aa19.36■□□□□ 0.69
CTNNA1-236ENST00000522792 UBTFL1P0CB47 393 aaPredicted RBP19.35■□□□□ 0.69
CTNNA1-236ENST00000522792 ANKRD13DQ6ZTN6 518 aa19.35■□□□□ 0.69
CTNNA1-236ENST00000522792 RPAP2Q8IXW5 612 aaPredicted RBP19.35■□□□□ 0.69
CTNNA1-236ENST00000522792 TEX13AQ9BXU3 409 aaPredicted RBP19.35■□□□□ 0.69
CTNNA1-236ENST00000522792 QTRT2Q9H974 415 aaKnown RBP19.35■□□□□ 0.69
CTNNA1-236ENST00000522792 LRRFIP2Q9Y608 721 aaKnown RBP19.35■□□□□ 0.69
CTNNA1-236ENST00000522792 ZNF330Q9Y3S2 320 aaPredicted RBP19.34■□□□□ 0.69
CTNNA1-236ENST00000522792 TJP1Q07157 1748 aa19.34■□□□□ 0.69
CTNNA1-236ENST00000522792 STARD3NLO95772 234 aa19.34■□□□□ 0.69
CTNNA1-236ENST00000522792 NBPF7P0C2Y1 421 aaPredicted RBP19.34■□□□□ 0.69
CTNNA1-236ENST00000522792 TTLL7Q6ZT98 887 aa19.34■□□□□ 0.69
CTNNA1-236ENST00000522792 LINS1Q8NG48 757 aa19.34■□□□□ 0.69
CTNNA1-236ENST00000522792 MYD88Q99836 296 aa19.34■□□□□ 0.69
CTNNA1-236ENST00000522792 ARFGEF2Q9Y6D5 1785 aa19.33■□□□□ 0.68
CTNNA1-236ENST00000522792 ALDH1L1O75891 902 aa19.33■□□□□ 0.68
CTNNA1-236ENST00000522792 METTL22Q9BUU2 404 aaPredicted RBP19.33■□□□□ 0.68
CTNNA1-236ENST00000522792 IGKV5-2P06315 115 aa19.32■□□□□ 0.68
CTNNA1-236ENST00000522792 NEXNQ0ZGT2 675 aa19.32■□□□□ 0.68
CTNNA1-236ENST00000522792 SEPT12Q8IYM1 358 aa19.32■□□□□ 0.68
CTNNA1-236ENST00000522792 CYP19A1P11511 503 aaPredicted RBP19.32■□□□□ 0.68
CTNNA1-236ENST00000522792 PLBD2Q8NHP8 589 aa19.32■□□□□ 0.68
CTNNA1-236ENST00000522792 GCC1Q96CN9 775 aa19.32■□□□□ 0.68
CTNNA1-236ENST00000522792 PALLDQ8WX93 1383 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms