RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 RSPH6AQ9H0K4 717 aa13.68□□□□□ -0.22
CTNNA1-235ENST00000522730 ZBTB1Q9Y2K1 713 aa13.68□□□□□ -0.22
CTNNA1-235ENST00000522730 SCN11AQ9UI33 1791 aa13.68□□□□□ -0.22
CTNNA1-235ENST00000522730 CICQ96RK0 1608 aaPredicted RBP13.68□□□□□ -0.22
CTNNA1-235ENST00000522730 BTBD11A6QL63 1104 aa13.67□□□□□ -0.22
CTNNA1-235ENST00000522730 BICDL1Q6ZP65 573 aa13.67□□□□□ -0.22
CTNNA1-235ENST00000522730 VSIG10Q8N0Z9 540 aa13.67□□□□□ -0.22
CTNNA1-235ENST00000522730 RTF1Q92541 710 aaKnown RBP13.67□□□□□ -0.22
CTNNA1-235ENST00000522730 ZNF496Q96IT1 587 aaPredicted RBP13.67□□□□□ -0.22
CTNNA1-235ENST00000522730 GPBP1L1Q9HC44 474 aaPredicted RBP13.67□□□□□ -0.22
CTNNA1-235ENST00000522730 COL3A1P02461 1466 aaPredicted RBP13.67□□□□□ -0.22
CTNNA1-235ENST00000522730 SOS1Q07889 1333 aaPredicted RBP13.66□□□□□ -0.22
CTNNA1-235ENST00000522730 KCNQ3O43525 872 aa13.66□□□□□ -0.22
CTNNA1-235ENST00000522730 TM4SF1P30408 202 aa13.66□□□□□ -0.22
CTNNA1-235ENST00000522730 CHRNA5P30532 468 aa13.66□□□□□ -0.22
CTNNA1-235ENST00000522730 ZNF790Q6PG37 636 aa13.66□□□□□ -0.22
CTNNA1-235ENST00000522730 MCM10Q7L590 875 aa13.66□□□□□ -0.22
CTNNA1-235ENST00000522730 NARFQ9UHQ1 456 aa13.66□□□□□ -0.22
CTNNA1-235ENST00000522730 ATP10DQ9P241 1426 aa13.65□□□□□ -0.22
CTNNA1-235ENST00000522730 COL5A3P25940 1745 aaPredicted RBP13.65□□□□□ -0.22
CTNNA1-235ENST00000522730 DCTN1Q14203 1278 aa13.65□□□□□ -0.22
CTNNA1-235ENST00000522730 NPM2Q86SE8 214 aaKnown RBP13.65□□□□□ -0.22
CTNNA1-235ENST00000522730 FMNL2Q96PY5 1086 aa13.65□□□□□ -0.22
CTNNA1-235ENST00000522730 PIM2Q9P1W9 311 aa13.65□□□□□ -0.22
CTNNA1-235ENST00000522730 PXDNLA1KZ92 1463 aa13.65□□□□□ -0.22
CTNNA1-235ENST00000522730 ZNF831Q5JPB2 1677 aa13.64□□□□□ -0.23
CTNNA1-235ENST00000522730 POLRMTO00411 1230 aaKnown RBP13.64□□□□□ -0.23
CTNNA1-235ENST00000522730 A1BGP04217 495 aa13.64□□□□□ -0.23
CTNNA1-235ENST00000522730 NFIXQ14938 502 aa13.64□□□□□ -0.23
CTNNA1-235ENST00000522730 DALRD3Q5D0E6 543 aaKnown RBP13.64□□□□□ -0.23
CTNNA1-235ENST00000522730 TEX13AQ9BXU3 409 aaPredicted RBP13.64□□□□□ -0.23
CTNNA1-235ENST00000522730 TBC1D2BQ9UPU7 963 aa13.64□□□□□ -0.23
CTNNA1-235ENST00000522730 COL15A1P39059 1388 aa13.63□□□□□ -0.23
CTNNA1-235ENST00000522730 KCNA3P22001 575 aa13.63□□□□□ -0.23
CTNNA1-235ENST00000522730 TJP1Q07157 1748 aa13.63□□□□□ -0.23
CTNNA1-235ENST00000522730 C10orf71Q711Q0 1435 aa13.63□□□□□ -0.23
CTNNA1-235ENST00000522730 HEG1Q9ULI3 1381 aa13.62□□□□□ -0.23
CTNNA1-235ENST00000522730 A0A087WZG4 1122 aa13.62□□□□□ -0.23
CTNNA1-235ENST00000522730 SERPINB2P05120 415 aa13.62□□□□□ -0.23
CTNNA1-235ENST00000522730 NEFMP07197 916 aa13.62□□□□□ -0.23
CTNNA1-235ENST00000522730 PIP4K2AP48426 406 aaPredicted RBP13.62□□□□□ -0.23
CTNNA1-235ENST00000522730 EIF5P55010 431 aaKnown RBP13.62□□□□□ -0.23
CTNNA1-235ENST00000522730 BCL2L12Q9HB09 334 aa13.62□□□□□ -0.23
CTNNA1-235ENST00000522730 MIS18AQ9NYP9 233 aa13.62□□□□□ -0.23
CTNNA1-235ENST00000522730 KCPQ6ZWJ8 1503 aa13.62□□□□□ -0.23
CTNNA1-235ENST00000522730 N4BP2Q86UW6 1770 aaPredicted RBP13.62□□□□□ -0.23
CTNNA1-235ENST00000522730 C4AP0C0L4 1744 aa13.61□□□□□ -0.23
CTNNA1-235ENST00000522730 MRC1P22897 1456 aa13.61□□□□□ -0.23
CTNNA1-235ENST00000522730 CCDC24Q8N4L8 307 aa13.61□□□□□ -0.23
CTNNA1-235ENST00000522730 PRAMEF22A3QJZ6 481 aa13.6□□□□□ -0.23
CTNNA1-235ENST00000522730 NPHP1O15259 732 aa13.6□□□□□ -0.23
CTNNA1-235ENST00000522730 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
CTNNA1-235ENST00000522730 TBC1D9BQ66K14 1250 aa13.6□□□□□ -0.23
CTNNA1-235ENST00000522730 USP16Q9Y5T5 823 aa13.6□□□□□ -0.23
CTNNA1-235ENST00000522730 DDX10Q13206 875 aaKnown RBP13.59□□□□□ -0.23
CTNNA1-235ENST00000522730 C9orf131Q5VYM1 1079 aa13.59□□□□□ -0.23
CTNNA1-235ENST00000522730 C2CD5Q86YS7 1000 aa13.59□□□□□ -0.23
CTNNA1-235ENST00000522730 VIRMAQ69YN4 1812 aaKnown RBP13.58□□□□□ -0.24
CTNNA1-235ENST00000522730 SNRPA1P09661 255 aaKnown RBP13.58□□□□□ -0.24
CTNNA1-235ENST00000522730 IL6STP40189 918 aaPredicted RBP13.58□□□□□ -0.24
CTNNA1-235ENST00000522730 TAF7Q15545 349 aaPredicted RBP13.58□□□□□ -0.24
CTNNA1-235ENST00000522730 CEMIPQ8WUJ3 1361 aa13.58□□□□□ -0.24
CTNNA1-235ENST00000522730 CEP350Q5VT06 3117 aa13.57□□□□□ -0.24
CTNNA1-235ENST00000522730 H0YIN7 160 aa13.57□□□□□ -0.24
CTNNA1-235ENST00000522730 DZIP3Q86Y13 1208 aaKnown RBP13.57□□□□□ -0.24
CTNNA1-235ENST00000522730 ZNF622Q969S3 477 aaKnown RBP eCLIP13.57□□□□□ -0.24
CTNNA1-235ENST00000522730 SETDB2Q96T68 719 aa13.57□□□□□ -0.24
CTNNA1-235ENST00000522730 ZNF219Q9P2Y4 722 aaPredicted RBP13.57□□□□□ -0.24
CTNNA1-235ENST00000522730 HTATSF1O43719 755 aaKnown RBP13.56□□□□□ -0.24
CTNNA1-235ENST00000522730 NGEFQ8N5V2 710 aa13.56□□□□□ -0.24
CTNNA1-235ENST00000522730 THUMPD2Q9BTF0 503 aaKnown RBP13.56□□□□□ -0.24
CTNNA1-235ENST00000522730 RNF181Q9P0P0 153 aa13.56□□□□□ -0.24
CTNNA1-235ENST00000522730 ADAMTS7Q9UKP4 1686 aa13.56□□□□□ -0.24
CTNNA1-235ENST00000522730 ADCY9O60503 1353 aa13.56□□□□□ -0.24
CTNNA1-235ENST00000522730 TTLL6Q8N841 843 aa13.55□□□□□ -0.24
CTNNA1-235ENST00000522730 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
CTNNA1-235ENST00000522730 MAPK8IP3Q9UPT6 1336 aa13.55□□□□□ -0.24
CTNNA1-235ENST00000522730 KIF13BQ9NQT8 1826 aa13.55□□□□□ -0.24
CTNNA1-235ENST00000522730 FAM177BA6PVY3 158 aa13.54□□□□□ -0.24
CTNNA1-235ENST00000522730 CAMTA2O94983 1202 aa13.54□□□□□ -0.24
CTNNA1-235ENST00000522730 PNNQ9H307 717 aaKnown RBP13.54□□□□□ -0.24
CTNNA1-235ENST00000522730 KIAA1551Q9HCM1 1747 aa13.53□□□□□ -0.24
CTNNA1-235ENST00000522730 RASSF7Q02833 373 aa13.53□□□□□ -0.24
CTNNA1-235ENST00000522730 NFE2L2Q16236 605 aa13.53□□□□□ -0.24
CTNNA1-235ENST00000522730 PRR5LQ6MZQ0 368 aa13.53□□□□□ -0.24
CTNNA1-235ENST00000522730 NMRK2Q9NPI5 230 aa13.53□□□□□ -0.24
CTNNA1-235ENST00000522730 CARMIL3Q8ND23 1372 aa13.53□□□□□ -0.24
CTNNA1-235ENST00000522730 NBPF26B4DH59 902 aa13.52□□□□□ -0.25
CTNNA1-235ENST00000522730 KIF3CO14782 793 aa13.52□□□□□ -0.25
CTNNA1-235ENST00000522730 PDE6BP35913 854 aa13.52□□□□□ -0.25
CTNNA1-235ENST00000522730 NBPF10Q6P3W6 841 aaKnown RBP13.52□□□□□ -0.25
CTNNA1-235ENST00000522730 NBPF5PQ86XG9 351 aaPredicted RBP13.52□□□□□ -0.25
CTNNA1-235ENST00000522730 C16orf71Q8IYS4 520 aaPredicted RBP13.52□□□□□ -0.25
CTNNA1-235ENST00000522730 NBPF15Q8N660 670 aa13.52□□□□□ -0.25
CTNNA1-235ENST00000522730 CNBD1Q8NA66 436 aa13.52□□□□□ -0.25
CTNNA1-235ENST00000522730 PLEKHF1Q96S99 279 aa13.52□□□□□ -0.25
CTNNA1-235ENST00000522730 BRIP1Q9BX63 1249 aa13.52□□□□□ -0.25
CTNNA1-235ENST00000522730 RRP7AQ9Y3A4 280 aaKnown RBP13.52□□□□□ -0.25
CTNNA1-235ENST00000522730 UBR2Q8IWV8 1755 aa13.52□□□□□ -0.25
CTNNA1-235ENST00000522730 C21orf2O43822 256 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms