RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	USP21	Q9UK80	565 aa		12.11	□□□□□ -0.47
TCF7-223	ENST00000522653	MVP	Q14764	893 aa	Known RBP	12.11	□□□□□ -0.47
TCF7-223	ENST00000522653	CDC45	O75419	566 aa		12.1	□□□□□ -0.47
TCF7-223	ENST00000522653	LRSAM1	Q6UWE0	723 aa		12.1	□□□□□ -0.47
TCF7-223	ENST00000522653	GLRX3	O76003	335 aa	Known RBP	12.1	□□□□□ -0.47
TCF7-223	ENST00000522653	KCNA6	P17658	529 aa		12.1	□□□□□ -0.47
TCF7-223	ENST00000522653	IQCA1	Q86XH1	822 aa		12.1	□□□□□ -0.47
TCF7-223	ENST00000522653	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.1	□□□□□ -0.47
TCF7-223	ENST00000522653	YEATS2	Q9ULM3	1422 aa		12.1	□□□□□ -0.47
TCF7-223	ENST00000522653	ABCC10	Q5T3U5	1492 aa		12.1	□□□□□ -0.47
TCF7-223	ENST00000522653	LETM1	O95202	739 aa	Predicted RBP	12.1	□□□□□ -0.47
TCF7-223	ENST00000522653	IMMT	Q16891	758 aa	Known RBP	12.1	□□□□□ -0.47
TCF7-223	ENST00000522653	ANKRD24	Q8TF21	1146 aa		12.1	□□□□□ -0.47
TCF7-223	ENST00000522653	TSPY26P	Q9H489	355 aa		12.1	□□□□□ -0.47
TCF7-223	ENST00000522653	SLC4A2	P04920	1241 aa		12.1	□□□□□ -0.47
TCF7-223	ENST00000522653	SNRPA1	P09661	255 aa	Known RBP	12.1	□□□□□ -0.47
TCF7-223	ENST00000522653	PDE4B	Q07343	736 aa		12.1	□□□□□ -0.47
TCF7-223	ENST00000522653	TMEM266	Q2M3C6	531 aa		12.1	□□□□□ -0.47
TCF7-223	ENST00000522653	ABCF2	Q9UG63	623 aa		12.1	□□□□□ -0.47
TCF7-223	ENST00000522653	NAP1L1	P55209	391 aa	Known RBP	12.09	□□□□□ -0.47
TCF7-223	ENST00000522653	CCDC117	Q8IWD4	279 aa	Predicted RBP	12.09	□□□□□ -0.47
TCF7-223	ENST00000522653	TRPM2	O94759	1503 aa		12.09	□□□□□ -0.47
TCF7-223	ENST00000522653	RAB11FIP3	O75154	756 aa		12.09	□□□□□ -0.47
TCF7-223	ENST00000522653	RNF214	Q8ND24	703 aa		12.09	□□□□□ -0.47
TCF7-223	ENST00000522653	PDZRN3	Q9UPQ7	1066 aa		12.09	□□□□□ -0.47
TCF7-223	ENST00000522653	PTPN23	Q9H3S7	1636 aa		12.09	□□□□□ -0.47
TCF7-223	ENST00000522653		H0YIN7	160 aa		12.09	□□□□□ -0.47
TCF7-223	ENST00000522653	WDR63	Q8IWG1	891 aa		12.09	□□□□□ -0.47
TCF7-223	ENST00000522653	PABPC4	Q13310	644 aa	Known RBP eCLIP	12.08	□□□□□ -0.47
TCF7-223	ENST00000522653	ZNF608	Q9ULD9	1512 aa	Predicted RBP	12.08	□□□□□ -0.48
TCF7-223	ENST00000522653	PABPN1L	A6NDY0	278 aa	Known RBP	12.08	□□□□□ -0.48
TCF7-223	ENST00000522653	SASS6	Q6UVJ0	657 aa		12.08	□□□□□ -0.48
TCF7-223	ENST00000522653	CTCFL	Q8NI51	663 aa	Predicted RBP	12.08	□□□□□ -0.48
TCF7-223	ENST00000522653	TSPYL1	Q9H0U9	437 aa		12.08	□□□□□ -0.48
TCF7-223	ENST00000522653	SPC25	Q9HBM1	224 aa		12.08	□□□□□ -0.48
TCF7-223	ENST00000522653	ABCC11	Q96J66	1382 aa		12.08	□□□□□ -0.48
TCF7-223	ENST00000522653	CCAR2	Q8N163	923 aa	Known RBP	12.08	□□□□□ -0.48
TCF7-223	ENST00000522653	FERMT1	Q9BQL6	677 aa		12.08	□□□□□ -0.48
TCF7-223	ENST00000522653	TMOD4	Q9NZQ9	345 aa		12.08	□□□□□ -0.48
TCF7-223	ENST00000522653	DBF4	Q9UBU7	674 aa	Predicted RBP	12.08	□□□□□ -0.48
TCF7-223	ENST00000522653	KIF5B	P33176	963 aa		12.08	□□□□□ -0.48
TCF7-223	ENST00000522653	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.08	□□□□□ -0.48
TCF7-223	ENST00000522653	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.08	□□□□□ -0.48
TCF7-223	ENST00000522653	PDCL2	Q8N4E4	241 aa		12.08	□□□□□ -0.48
TCF7-223	ENST00000522653	MNS1	Q8NEH6	495 aa		12.08	□□□□□ -0.48
TCF7-223	ENST00000522653	CA8	P35219	290 aa		12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	CRNKL1	Q9BZJ0	848 aa	Known RBP	12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	ACBD3	Q9H3P7	528 aa		12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	ZNHIT6	Q9NWK9	470 aa	Known RBP	12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	CWC25	Q9NXE8	425 aa	Predicted RBP	12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	PCDH11X	Q9BZA7	1347 aa		12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	PCDH11Y	Q9BZA8	1340 aa		12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	USP37	Q86T82	979 aa		12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	CCDC97	Q96F63	343 aa	Predicted RBP	12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	LRRC27	Q9C0I9	530 aa		12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	WDR97	A6NE52	1622 aa		12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	HOMER1	Q86YM7	354 aa		12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	UTP14A	Q9BVJ6	771 aa	Known RBP	12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	TBX22	Q9Y458	520 aa		12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	IVNS1ABP	Q9Y6Y0	642 aa		12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	ERLIN2	O94905	339 aa		12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	PICK1	Q9NRD5	415 aa		12.07	□□□□□ -0.48
TCF7-223	ENST00000522653	THOC2	Q8NI27	1593 aa	Known RBP	12.06	□□□□□ -0.48
TCF7-223	ENST00000522653	A2M	P01023	1474 aa		12.06	□□□□□ -0.48
TCF7-223	ENST00000522653	ARHGEF11	O15085	1522 aa		12.06	□□□□□ -0.48
TCF7-223	ENST00000522653	IDH1	O75874	414 aa	Known RBP	12.06	□□□□□ -0.48
TCF7-223	ENST00000522653	APBA3	O96018	575 aa		12.06	□□□□□ -0.48
TCF7-223	ENST00000522653	CHMP4BP1	P59074	171 aa		12.06	□□□□□ -0.48
TCF7-223	ENST00000522653	RIMS2	Q9UQ26	1411 aa		12.06	□□□□□ -0.48
TCF7-223	ENST00000522653	PLCH2	O75038	1416 aa		12.06	□□□□□ -0.48
TCF7-223	ENST00000522653	NCKAP5L	Q9HCH0	1330 aa		12.06	□□□□□ -0.48
TCF7-223	ENST00000522653	ALDH1B1	P30837	517 aa		12.05	□□□□□ -0.48
TCF7-223	ENST00000522653	PDE3A	Q14432	1141 aa		12.05	□□□□□ -0.48
TCF7-223	ENST00000522653	NOD1	Q9Y239	953 aa		12.05	□□□□□ -0.48
TCF7-223	ENST00000522653		H7C1D1	291 aa		12.05	□□□□□ -0.48
TCF7-223	ENST00000522653	PRKAG2	Q9UGJ0	569 aa		12.05	□□□□□ -0.48
TCF7-223	ENST00000522653	FGFR1OP	O95684	399 aa	Known RBP	12.05	□□□□□ -0.48
TCF7-223	ENST00000522653	AEBP1	Q8IUX7	1158 aa		12.05	□□□□□ -0.48
TCF7-223	ENST00000522653	NUP133	Q8WUM0	1156 aa		12.05	□□□□□ -0.48
TCF7-223	ENST00000522653	CDCA7L	Q96GN5	454 aa		12.05	□□□□□ -0.48
TCF7-223	ENST00000522653	CDK13	Q14004	1512 aa	Known RBP	12.05	□□□□□ -0.48
TCF7-223	ENST00000522653	PPIP5K1	Q6PFW1	1433 aa		12.05	□□□□□ -0.48
TCF7-223	ENST00000522653	ELMSAN1	Q6PJG2	1045 aa		12.05	□□□□□ -0.48
TCF7-223	ENST00000522653	CCDC82	Q8N4S0	544 aa		12.05	□□□□□ -0.48
TCF7-223	ENST00000522653	PRDM10	Q9NQV6	1147 aa		12.05	□□□□□ -0.48
TCF7-223	ENST00000522653	PNMA2	Q9UL42	364 aa		12.05	□□□□□ -0.48
TCF7-223	ENST00000522653	EPB41L2	O43491	1005 aa	Known RBP	12.04	□□□□□ -0.48
TCF7-223	ENST00000522653	GPHN	Q9NQX3	736 aa	Predicted RBP	12.04	□□□□□ -0.48
TCF7-223	ENST00000522653	CCNL1	Q9UK58	526 aa	Predicted RBP	12.04	□□□□□ -0.48
TCF7-223	ENST00000522653	CCP110	O43303	1012 aa		12.04	□□□□□ -0.48
TCF7-223	ENST00000522653	CETN1	Q12798	172 aa		12.04	□□□□□ -0.48
TCF7-223	ENST00000522653	HSP90B2P	Q58FF3	399 aa		12.04	□□□□□ -0.48
TCF7-223	ENST00000522653	PYM1	Q9BRP8	204 aa	Known RBP	12.04	□□□□□ -0.48
TCF7-223	ENST00000522653	HMGB1	P09429	215 aa	Known RBP	12.04	□□□□□ -0.48
TCF7-223	ENST00000522653	PARP10	Q53GL7	1025 aa		12.04	□□□□□ -0.48
TCF7-223	ENST00000522653	NIM1K	Q8IY84	436 aa		12.04	□□□□□ -0.48
TCF7-223	ENST00000522653	NAPB	Q9H115	298 aa		12.04	□□□□□ -0.48
TCF7-223	ENST00000522653	ZHX3	Q9H4I2	956 aa		12.04	□□□□□ -0.48
TCF7-223	ENST00000522653		U3KPZ7	1027 aa	Predicted RBP	12.04	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms