RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 KIF7Q2M1P5 1343 aa20.78■□□□□ 0.92
TRAPPC9-213ENST00000522504 NFIXQ14938 502 aa20.78■□□□□ 0.92
TRAPPC9-213ENST00000522504 BCL2L12Q9HB09 334 aa20.78■□□□□ 0.92
TRAPPC9-213ENST00000522504 RNF181Q9P0P0 153 aa20.78■□□□□ 0.92
TRAPPC9-213ENST00000522504 PER1O15534 1290 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC9-213ENST00000522504 HTRA3P83110 453 aa20.76■□□□□ 0.91
TRAPPC9-213ENST00000522504 RBM46Q8TBY0 533 aaKnown RBP20.76■□□□□ 0.91
TRAPPC9-213ENST00000522504 NARFQ9UHQ1 456 aa20.76■□□□□ 0.91
TRAPPC9-213ENST00000522504 COL15A1P39059 1388 aa20.75■□□□□ 0.91
TRAPPC9-213ENST00000522504 CCER1Q8TC90 406 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC9-213ENST00000522504 PRELPP51888 382 aa20.74■□□□□ 0.91
TRAPPC9-213ENST00000522504 RASSF7Q02833 373 aa20.74■□□□□ 0.91
TRAPPC9-213ENST00000522504 CC2D1BQ5T0F9 858 aaKnown RBP20.73■□□□□ 0.91
TRAPPC9-213ENST00000522504 RRAGCQ9HB90 399 aa20.73■□□□□ 0.91
TRAPPC9-213ENST00000522504 DIAPH1O60610 1272 aaKnown RBP20.72■□□□□ 0.91
TRAPPC9-213ENST00000522504 SERPINB2P05120 415 aa20.72■□□□□ 0.91
TRAPPC9-213ENST00000522504 CARMIL3Q8ND23 1372 aa20.72■□□□□ 0.91
TRAPPC9-213ENST00000522504 CANXP27824 592 aaKnown RBP20.71■□□□□ 0.91
TRAPPC9-213ENST00000522504 VSIG10Q8N0Z9 540 aa20.71■□□□□ 0.91
TRAPPC9-213ENST00000522504 KDM2BQ8NHM5 1336 aa20.71■□□□□ 0.91
TRAPPC9-213ENST00000522504 AFDNP55196 1824 aaKnown RBP20.7■□□□□ 0.9
TRAPPC9-213ENST00000522504 C16orf71Q8IYS4 520 aaPredicted RBP20.7■□□□□ 0.9
TRAPPC9-213ENST00000522504 NRXN2Q9P2S2 1712 aa20.7■□□□□ 0.9
TRAPPC9-213ENST00000522504 EIF5P55010 431 aaKnown RBP20.69■□□□□ 0.9
TRAPPC9-213ENST00000522504 SBF1O95248 1867 aa20.69■□□□□ 0.9
TRAPPC9-213ENST00000522504 COL3A1P02461 1466 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC9-213ENST00000522504 FSTL1Q12841 308 aa20.68■□□□□ 0.9
TRAPPC9-213ENST00000522504 BICDL1Q6ZP65 573 aa20.68■□□□□ 0.9
TRAPPC9-213ENST00000522504 IL17REQ8NFR9 667 aa20.68■□□□□ 0.9
TRAPPC9-213ENST00000522504 ZNF496Q96IT1 587 aaPredicted RBP20.68■□□□□ 0.9
TRAPPC9-213ENST00000522504 UBR2Q8IWV8 1755 aa20.67■□□□□ 0.9
TRAPPC9-213ENST00000522504 C2CD5Q86YS7 1000 aa20.67■□□□□ 0.9
TRAPPC9-213ENST00000522504 WDR90Q96KV7 1748 aa20.67■□□□□ 0.9
TRAPPC9-213ENST00000522504 VIRMAQ69YN4 1812 aaKnown RBP20.67■□□□□ 0.9
TRAPPC9-213ENST00000522504 LMNB1P20700 586 aa20.66■□□□□ 0.9
TRAPPC9-213ENST00000522504 CNGB1Q14028 1251 aaPredicted RBP20.66■□□□□ 0.9
TRAPPC9-213ENST00000522504 TTLL6Q8N841 843 aa20.66■□□□□ 0.9
TRAPPC9-213ENST00000522504 NFKBIEO00221 500 aa20.65■□□□□ 0.9
TRAPPC9-213ENST00000522504 STARD3NLO95772 234 aa20.65■□□□□ 0.9
TRAPPC9-213ENST00000522504 TBC1D9BQ66K14 1250 aa20.65■□□□□ 0.9
TRAPPC9-213ENST00000522504 KLRG1Q96E93 195 aa20.65■□□□□ 0.9
TRAPPC9-213ENST00000522504 ZNF790Q6PG37 636 aa20.64■□□□□ 0.89
TRAPPC9-213ENST00000522504 TTC5Q8N0Z6 440 aa20.64■□□□□ 0.89
TRAPPC9-213ENST00000522504 CCDC24Q8N4L8 307 aa20.64■□□□□ 0.89
TRAPPC9-213ENST00000522504 HEG1Q9ULI3 1381 aa20.63■□□□□ 0.89
TRAPPC9-213ENST00000522504 H0YIN7 160 aa20.63■□□□□ 0.89
TRAPPC9-213ENST00000522504 U2SURPO15042 1029 aaKnown RBP20.63■□□□□ 0.89
TRAPPC9-213ENST00000522504 TBC1D2BQ9UPU7 963 aa20.63■□□□□ 0.89
TRAPPC9-213ENST00000522504 DLEC1Q9Y238 1755 aa20.62■□□□□ 0.89
TRAPPC9-213ENST00000522504 ZC3H4Q9UPT8 1303 aaKnown RBP20.62■□□□□ 0.89
TRAPPC9-213ENST00000522504 TNRC6CQ9HCJ0 1690 aaKnown RBP20.62■□□□□ 0.89
TRAPPC9-213ENST00000522504 GLTPD2A6NH11 291 aa20.62■□□□□ 0.89
TRAPPC9-213ENST00000522504 GNAT3A8MTJ3 354 aa20.62■□□□□ 0.89
TRAPPC9-213ENST00000522504 KCNQ3O43525 872 aa20.62■□□□□ 0.89
TRAPPC9-213ENST00000522504 JMYQ8N9B5 988 aa20.62■□□□□ 0.89
TRAPPC9-213ENST00000522504 A0A087WZG4 1122 aa20.61■□□□□ 0.89
TRAPPC9-213ENST00000522504 TEFQ10587 303 aa20.61■□□□□ 0.89
TRAPPC9-213ENST00000522504 SMC1BQ8NDV3 1235 aa20.61■□□□□ 0.89
TRAPPC9-213ENST00000522504 A1BGP04217 495 aa20.6■□□□□ 0.89
TRAPPC9-213ENST00000522504 PRR5LQ6MZQ0 368 aa20.6■□□□□ 0.89
TRAPPC9-213ENST00000522504 PHACTR3Q96KR7 559 aa20.6■□□□□ 0.89
TRAPPC9-213ENST00000522504 ZNF330Q9Y3S2 320 aaPredicted RBP20.6■□□□□ 0.89
TRAPPC9-213ENST00000522504 NPC1L1Q9UHC9 1359 aa20.59■□□□□ 0.89
TRAPPC9-213ENST00000522504 POTECB2RU33 542 aa20.59■□□□□ 0.89
TRAPPC9-213ENST00000522504 GAS2L2Q8NHY3 880 aa20.59■□□□□ 0.89
TRAPPC9-213ENST00000522504 BRIP1Q9BX63 1249 aa20.59■□□□□ 0.89
TRAPPC9-213ENST00000522504 ZNF219Q9P2Y4 722 aaPredicted RBP20.59■□□□□ 0.89
TRAPPC9-213ENST00000522504 ANKRD31Q8N7Z5 1873 aa20.58■□□□□ 0.89
TRAPPC9-213ENST00000522504 C21orf2O43822 256 aa20.58■□□□□ 0.89
TRAPPC9-213ENST00000522504 VEGFAP15692 232 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC9-213ENST00000522504 IL6STP40189 918 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC9-213ENST00000522504 ZNF622Q969S3 477 aaKnown RBP eCLIP20.58■□□□□ 0.89
TRAPPC9-213ENST00000522504 CEMIPQ8WUJ3 1361 aa20.58■□□□□ 0.88
TRAPPC9-213ENST00000522504 SIPA1L3O60292 1781 aaPredicted RBP20.57■□□□□ 0.88
TRAPPC9-213ENST00000522504 CAMTA2O94983 1202 aa20.57■□□□□ 0.88
TRAPPC9-213ENST00000522504 COL13A1Q5TAT6 717 aaPredicted RBP20.57■□□□□ 0.88
TRAPPC9-213ENST00000522504 TEX13AQ9BXU3 409 aaPredicted RBP20.57■□□□□ 0.88
TRAPPC9-213ENST00000522504 SCN7AQ01118 1682 aa20.57■□□□□ 0.88
TRAPPC9-213ENST00000522504 PIP4K2AP48426 406 aaPredicted RBP20.56■□□□□ 0.88
TRAPPC9-213ENST00000522504 FMNL2Q96PY5 1086 aa20.56■□□□□ 0.88
TRAPPC9-213ENST00000522504 COL11A2P13942 1736 aaPredicted RBP20.56■□□□□ 0.88
TRAPPC9-213ENST00000522504 PRAMEF22A3QJZ6 481 aa20.55■□□□□ 0.88
TRAPPC9-213ENST00000522504 PRKAR2BP31323 418 aa20.55■□□□□ 0.88
TRAPPC9-213ENST00000522504 PDE6BP35913 854 aa20.55■□□□□ 0.88
TRAPPC9-213ENST00000522504 RSPH6AQ9H0K4 717 aa20.55■□□□□ 0.88
TRAPPC9-213ENST00000522504 TIAM2Q8IVF5 1701 aa20.55■□□□□ 0.88
TRAPPC9-213ENST00000522504 USP16Q9Y5T5 823 aa20.54■□□□□ 0.88
TRAPPC9-213ENST00000522504 BTBD11A6QL63 1104 aa20.53■□□□□ 0.88
TRAPPC9-213ENST00000522504 SETDB2Q96T68 719 aa20.53■□□□□ 0.88
TRAPPC9-213ENST00000522504 ERFEQ4G0M1 354 aa20.52■□□□□ 0.88
TRAPPC9-213ENST00000522504 CNBD1Q8NA66 436 aa20.52■□□□□ 0.88
TRAPPC9-213ENST00000522504 CCDC88AQ3V6T2 1871 aa20.52■□□□□ 0.87
TRAPPC9-213ENST00000522504 SRGNP10124 158 aa20.51■□□□□ 0.87
TRAPPC9-213ENST00000522504 DZIP3Q86Y13 1208 aaKnown RBP20.51■□□□□ 0.87
TRAPPC9-213ENST00000522504 PDZRN3Q9UPQ7 1066 aa20.51■□□□□ 0.87
TRAPPC9-213ENST00000522504 STYK1Q6J9G0 422 aa20.49■□□□□ 0.87
TRAPPC9-213ENST00000522504 PRPF40BQ6NWY9 871 aaKnown RBP20.49■□□□□ 0.87
TRAPPC9-213ENST00000522504 MCM10Q7L590 875 aa20.49■□□□□ 0.87
TRAPPC9-213ENST00000522504 TAOK3Q9H2K8 898 aa20.49■□□□□ 0.87
TRAPPC9-213ENST00000522504 FER1L6Q2WGJ9 1857 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 814.5 ms